Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for psmb1

Gene Name Gene ID Reads Annotation
psmb1 ENSDARG00000009640 8628 proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]










Genes with expression patterns similar to psmb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmb1 ENSDARG00000009640 8628 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
2. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.323 0.916 0.703 0.704 - - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
3. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.941 0.949 - - - - - 0.992 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
4. lipin2 2021 1.871 0.891 - - - - - - 0.980 - lipin 2, transcript variant X2
5. npepl1 ENSDARG00000012871 3064 1.855 0.911 0.944 - - - - - - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
6. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.829 0.933 - 0.896 - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
7. stx4 ENSDARG00000052518 1848 1.811 - - - - - 0.829 - 0.982 - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
8. atp5h 18018 1.807 - - - - - 0.857 - 0.950 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
9. rcor1 ENSDARG00000031434 2733 1.771 0.875 - - - - - - 0.896 - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
10. ylpm1 ENSDARG00000043680 7676 1.769 - - - - - 0.821 - 0.948 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
11. smyd2b ENSDARG00000005629 8181 1.76 - - - - - 0.760 1.000 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
12. ctsf ENSDARG00000063095 4564 1.76 0.912 - 0.848 - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
13. adnp2b ENSDARG00000028431 4683 1.76 - - 0.827 - - - - 0.933 - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
14. atp5o 10343 1.757 0.923 - - - - 0.834 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
15. fam133b ENSDARG00000013863 5070 1.756 - - - - - - 1.000 0.756 - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
16. reep5 ENSDARG00000100742 1470 1.753 - - 0.779 - - - - 0.974 - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
17. rpl4 ENSDARG00000041182 18655 1.75 - - - - - - 0.995 0.755 - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
18. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.75 - - - - - - - 0.965 0.785 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
19. pfdn4 ENSDARG00000061228 8266 1.742 0.945 - 0.797 - - - - - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
20. si:ch73-110p20.1 5932 1.73 - - 0.821 - - - - 0.909 - si:ch73-110p20.1
21. f11r f11r 16668 1.719 0.746 - - - - - 0.973 - -
22. tegt ENSDARG00000077934 27182 1.703 - - 0.727 - - - 0.976 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
23. znf706 ENSDARG00000056307 12518 1.69 0.932 - - - - - - - 0.758 zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
24. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.681 - - - - - 0.734 - 0.947 - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
25. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.679 0.897 - - - - - - - 0.782 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
26. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.676 - - - - - 0.706 - 0.970 - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
27. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 1.671 0.912 - - - - 0.759 - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
28. DNAJA4 ENSDARG00000051762 5657 1.669 0.909 - - - - 0.760 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
29. drg1 ENSDARG00000039345 7545 1.649 - - 0.839 - - - - - 0.810 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
30. tead3a ENSDARG00000074321 2240 1.635 0.935 - - - - 0.700 - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
31. plcd1b ENSDARG00000034080 4074 1.633 - - 0.722 - - - - 0.911 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
32. snrpb ENSDARG00000011125 11729 1.628 0.858 - 0.770 - - - - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
33. anp32e ENSDARG00000054804 11017 1.621 - - 0.854 - - - - 0.767 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
34. snx12 ENSDARG00000019060 9563 1.605 - 0.710 0.895 - - - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
35. lsm12b ENSDARG00000109510 14459 1.6 - - 0.799 - - - - 0.801 - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
36. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.588 - - - - - 0.736 - 0.852 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
37. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.58 - - 0.790 - - 0.790 - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
38. eaf2 ENSDARG00000010432 3768 1.578 - - 0.832 - - 0.746 - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
39. morc2 ENSDARG00000028539 3259 1.571 - - - - - 0.742 - - 0.829 MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
40. rpl14 ENSDARG00000103433 69914 1.561 0.789 - - - - - 0.772 - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
41. cars ENSDARG00000036164 2019 1.556 - - 0.826 - - - - - 0.730 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
42. tmem2 2572 1.556 - - 0.812 - - - - - 0.744 transmembrane protein 2, transcript variant X1
43. atf4b1 atf4b1 17316 1.55 0.740 - 0.810 - - - - - -
44. kdm5c ENSDARG00000006124 4389 1.543 - - 0.813 - - - - - 0.730 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
45. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.542 - 0.720 0.822 - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
46. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.539 - - 0.802 - - 0.737 - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
47. sort1b ENSDARG00000056252 2652 1.539 - 0.725 0.814 - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
48. atp2b4 5891 1.532 0.828 - 0.704 - - - - - - ATPase, Ca++ transporting, plasma membrane 4
49. tdh ENSDARG00000002745 5344 1.506 - 0.742 - - - 0.764 - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
50. mibp2 ENSDARG00000101844 17444 1.504 - - 0.712 - - 0.792 - - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
51. ivns1abpa ENSDARG00000031100 3806 1.478 - 0.722 0.756 - - - - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
52. zswim5 ENSDARG00000055900 4243 1.475 - - 0.760 - - - - - 0.715 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
53. mgst2 ENSDARG00000071345 5626 1.47 0.753 0.717 - - - - - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
54. pbx2 ENSDARG00000019717 6892 1.468 - - 0.741 0.727 - - - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
55. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.467 - 0.740 0.727 - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
56. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.467 0.718 - - - - - - 0.749 - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
57. ntmt1 ENSDARG00000022399 5779 1.459 - - 0.717 - - 0.742 - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
58. clasp2 ENSDARG00000020345 3382 1 - - - - - - 1.000 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
59. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1 - - - - - - 1.000 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
60. aaas ENSDARG00000102274 1192 1 - - - - - - 1.000 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
61. sfrp5 ENSDARG00000039041 1777 1 - - - - - - 1.000 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
62. map7d3 ENSDARG00000060771 1739 1 - - - - - - 1.000 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
63. foxp1a ENSDARG00000004843 3961 1 - - - - - - 1.000 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
64. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1 - - - - - - 1.000 - -
65. si:ch211-71n6.4 ENSDARG00000102234 2499 1 - - - - - - 1.000 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
66. rhoad rhoad 8007 1 - - - - - - 1.000 - -
67. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1 - - - - - - 1.000 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
68. SEMA5B SEMA5B 1316 1 - - - - - - 1.000 - -
69. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1 - - - - - - 1.000 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
70. CAPN2 CAPN2 1497 0.999 - - - - - - 0.999 - -
71. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.999 - - - - - - 0.999 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
72. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.999 - - - - - - 0.999 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
73. vbp1 ENSDARG00000030241 10619 0.999 - - - - - - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
74. kpnb1 ENSDARG00000104889 9282 0.999 - - - - - - 0.999 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
75. selt2 12741 0.999 - - - - - - 0.999 - - selenoprotein T, 2
76. SGPP1 ENSDARG00000060534 1802 0.999 - - - - - - 0.999 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
77. CR548630.1 CR548630.1 3301 0.999 - - - - - - 0.999 - -
78. klf11a ENSDARG00000030844 3972 0.998 - - - - - - 0.998 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
79. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.997 - - - - - - 0.997 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
80. hspe1 ENSDARG00000056167 21636 0.996 - - - - - - 0.996 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
81. sdprb sdprb 13647 0.994 - - - - - - 0.994 - -
82. apg3l apg3l 5153 0.993 - - - - - - 0.993 - -
83. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.993 - - - - - - 0.993 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
84. syncrip ENSDARG00000040184 24690 0.991 - - - - - - 0.991 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
85. tnni1al 8272 0.988 - - - - - - 0.988 - - troponin I, skeletal, slow like, transcript variant X1
86. mybpc3 ENSDARG00000011615 7271 0.988 - - - - - - 0.988 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
87. hm13 ENSDARG00000037846 5019 0.987 - - - - - - - 0.987 - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
88. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.987 - - - - - - - 0.987 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
89. pknox1.1 ENSDARG00000018765 2149 0.985 - - - - - - - 0.985 - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
90. ZNF337_3 ZNF337_3 561 0.983 - - - - - - - 0.983 -
91. limch1a ENSDARG00000074275 2981 0.983 - - - - - - - 0.983 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
92. cyp20a1 ENSDARG00000006040 2570 0.983 - - - - - - - 0.983 - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
93. dcp1a ENSDARG00000100136 714 0.983 - - - - - - - 0.983 - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
94. cnot3a ENSDARG00000007135 3084 0.983 - - - - - - - 0.983 - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
95. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.982 - - - - - - - 0.982 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
96. smad9 368 0.982 - - - - - - - 0.982 - SMAD family member 9, transcript variant X1
97. ZBTB11 ENSDARG00000017886 817 0.982 - - - - - - - 0.982 - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
98. ncs1b ENSDARG00000054186 252 0.982 - - - - - - - 0.982 - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
99. CU694256.1 ENSDARG00000097007 290 0.982 - - - - - - - 0.982 -
100. porcnl_1 ENSDARG00000052455 683 0.982 - - - - - - - 0.982 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]

There are 1054 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA