Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psma4

Gene Name Gene ID Reads Annotation
psma4 ENSDARG00000045928 5112 proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]










Genes with expression patterns similar to psma4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psma4 ENSDARG00000045928 5112 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
2. lsm7 ENSDARG00000058328 7191 2.59 0.883 0.927 - - - - - - 0.780 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
3. leo1 ENSDARG00000055357 1644 2.561 0.881 - - - 0.859 0.821 - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
4. ktn1 ENSDARG00000032802 6251 2.528 0.871 0.844 - - - - 0.813 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
5. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 2.497 - 0.936 - - - 0.791 0.770 - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
6. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 2.448 - 0.812 - - - 0.844 0.792 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
7. atp5ia 4773 2.408 - 0.910 - - - 0.778 0.720 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
8. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.377 - 0.928 - - - 0.720 - - 0.729 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
9. snoU83B snoU83B 4666 2.376 0.781 - - - 0.775 - 0.820 - -
10. Sep-02 Sep-02 10074 2.367 - 0.841 - - - 0.802 0.724 - -
11. ube2na ENSDARG00000008748 4273 2.365 0.795 0.810 - - - - 0.760 - - ubiquitin-conjugating enzyme E2Na [Source:ZFIN;Acc:ZDB-GENE-040426-2873]
12. pi4k2b ENSDARG00000013881 1337 2.364 0.756 - - - 0.870 0.738 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
13. hoxd10a ENSDARG00000057859 1498 2.357 0.871 - - - 0.783 - 0.703 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
14. derl1 ENSDARG00000021905 4698 2.346 - 0.904 - - - 0.728 0.714 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
15. mccc2 ENSDARG00000017571 5635 2.343 0.845 0.742 - - - - 0.756 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
16. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.301 - 0.799 - - - 0.794 - - 0.708 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
17. h2afy2_1 ENSDARG00000087897 9887 2.256 0.725 - - - - 0.784 0.747 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
18. sumo3a ENSDARG00000028119 13447 2.24 - - - - - 0.727 0.798 - 0.715 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
19. KIAA0355 3250 2.232 0.775 - - - 0.717 - 0.740 - - KIAA0355 ortholog, transcript variant X1
20. ywhae2 ENSDARG00000017014 5105 2.185 0.710 - - - - - 0.732 - 0.743 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
21. lbr ENSDARG00000014013 4835 2.158 0.735 - - - - - 0.722 - 0.701 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
22. skia ENSDARG00000042151 1850 1.832 - 0.926 - - 0.906 - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
23. csnk1db ENSDARG00000006125 2581 1.819 - 0.931 - - 0.888 - - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
24. cpt1a cpt1a 674 1.809 - 0.899 - - 0.910 - - - -
25. hcls1 ENSDARG00000012729 1547 1.805 - 0.929 - - 0.876 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
26. pafah1b1b ENSDARG00000026595 1822 1.805 - 0.948 - - 0.857 - - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
27. ttll4 ENSDARG00000078935 1663 1.791 0.865 - - - 0.926 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
28. st8sia2 ENSDARG00000018788 2183 1.777 - 0.923 - - 0.854 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
29. hbegfa ENSDARG00000075121 1865 1.772 - 0.938 - - 0.834 - - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
30. uqcrfs1_1 ENSDARG00000007745 2687 1.765 - 0.870 - - 0.895 - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
31. patl1 ENSDARG00000017423 2744 1.765 - 0.936 - - 0.829 - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
32. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.759 - 0.919 - - 0.840 - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
33. si:dkey-28b4.8 ENSDARG00000002840 1277 1.756 0.874 - - - 0.882 - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
34. dlg5a ENSDARG00000074059 1834 1.753 0.837 0.916 - - - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
35. magi1b ENSDARG00000003169 2056 1.75 0.820 0.930 - - - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
36. cul4b ENSDARG00000060510 6053 1.745 - - - - 0.877 0.868 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
37. seh1l ENSDARG00000004280 2915 1.743 - 0.933 - - 0.810 - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
38. usp49 ENSDARG00000000229 706 1.743 0.880 - - - 0.863 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
39. zfand3 ENSDARG00000052833 2682 1.742 - 0.872 - - 0.870 - - - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
40. bsdc1 ENSDARG00000052623, ENSDARG00000116408 1987 1.739 - 0.905 - - - 0.834 - - - BSD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040905-1]
41. ddx42 ENSDARG00000037928 1659 1.735 - - - - 0.906 0.829 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
42. kansl3 ENSDARG00000029556 2487 1.729 - 0.931 - - - 0.798 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
43. pygb ENSDARG00000002021, ENSDARG00000116450 1304 1.728 0.796 0.932 - - - - - - - phosphorylase, glycogen; brain [Source:ZFIN;Acc:ZDB-GENE-040928-2]
44. si:ch211-120j21.1 si:ch211-120j21.1 638 1.726 0.850 - - - 0.876 - - - -
45. CDCA4 ENSDARG00000042319 7918 1.724 - 0.952 - - - 0.772 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
46. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.721 - 0.939 - - - - 0.782 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
47. znf503 ENSDARG00000018492 5974 1.704 - 0.953 - - - - 0.751 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
48. cpsf5 cpsf5 1841 1.696 0.840 - - - 0.856 - - - -
49. sin3ab ENSDARG00000059812 2140 1.694 - - - - 0.939 0.755 - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
50. hddc2 ENSDARG00000034957 905 1.694 0.783 0.911 - - - - - - - HD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-394]
51. CABZ01049057.1 CABZ01049057.1 479 1.693 - 0.919 - - - 0.774 - - -
52. sh3yl1 ENSDARG00000074393 815 1.693 0.806 - - - 0.887 - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
53. ube2f ENSDARG00000025754 1946 1.692 0.844 - - - 0.848 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
54. nusap1 ENSDARG00000002403 6953 1.692 - 0.944 - - - 0.748 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
55. lmnb1 ENSDARG00000044299 9817 1.69 0.862 0.828 - - - - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
56. CABZ01087568.1 CABZ01087568.1 1487 1.688 0.796 - - - 0.892 - - - -
57. BAZ2B BAZ2B 3285 1.685 0.757 0.928 - - - - - - -
58. her2 ENSDARG00000038205 3219 1.682 - 0.920 - - 0.762 - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
59. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.68 - - - - 0.857 0.823 - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
60. tcf7l1a ENSDARG00000038159 2288 1.677 - 0.928 - - - - 0.749 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
61. eva1ba ENSDARG00000102701 1480 1.674 0.769 - - - 0.905 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
62. ranbp1 ENSDARG00000014817 3371 1.671 - 0.945 - - - - - - 0.726 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
63. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.669 - 0.948 - - - 0.721 - - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
64. rab8a ENSDARG00000067920 975 1.666 - 0.912 - - - 0.754 - - - RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]
65. znf346 ENSDARG00000060695 3942 1.665 - 0.958 - - - - 0.707 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
66. csnk1da ENSDARG00000008370 3469 1.663 - 0.943 - - - 0.720 - - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
67. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.66 - 0.947 - - - 0.713 - - -
68. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.659 - - - - - 0.857 0.802 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
69. igf2r ENSDARG00000006094 1578 1.659 0.733 0.926 - - - - - - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
70. rerea ENSDARG00000077353 4162 1.657 0.798 - - - - 0.859 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
71. CABZ01092303.1 CABZ01092303.1 8825 1.656 0.789 0.867 - - - - - - -
72. vgll4b ENSDARG00000103730 5266 1.654 - 0.912 - - - - 0.742 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
73. eif2ak3 ENSDARG00000062139 3276 1.654 0.757 0.897 - - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
74. bcl2l1 ENSDARG00000008434 1956 1.651 0.741 0.910 - - - - - - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
75. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 1.648 0.748 0.900 - - - - - - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
76. zgc:101663 ENSDARG00000037852 830 1.647 0.727 0.920 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
77. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.647 - 0.834 - - - - 0.813 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
78. her15.2 her15.2 1701 1.641 0.840 - - - 0.801 - - - -
79. ing4 ENSDARG00000030716 5908 1.634 0.865 - - - 0.769 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
80. RNF5 ENSDARG00000075606 1730 1.633 0.836 - - - - 0.797 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
81. abat ENSDARG00000006031 2143 1.632 0.746 0.886 - - - - - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
82. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.63 - 0.792 - - - - 0.838 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
83. arid4a ENSDARG00000043873 4176 1.628 - 0.926 - - 0.702 - - - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
84. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.626 - 0.920 - - - 0.706 - - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
85. hoxc8a ENSDARG00000070346 4252 1.624 - 0.912 - - - - 0.712 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
86. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.619 - 0.890 - - - - 0.729 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
87. blcap ENSDARG00000052073 8646 1.616 - 0.883 - - - 0.733 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
88. tcta ENSDARG00000044194 1183 1.615 - - - - 0.909 - 0.706 - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
89. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.614 - 0.910 - - - - - - 0.704 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
90. abcf2a ENSDARG00000038785 2065 1.613 - - - - 0.872 - 0.741 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
91. lsm4 ENSDARG00000023852 6083 1.613 - 0.905 - - - - - - 0.708 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
92. naa15a ENSDARG00000003213 5889 1.612 - 0.870 - - - - 0.742 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
93. zgc:110626 ENSDARG00000053159 1124 1.612 0.843 - - - - 0.769 - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
94. tmed7 ENSDARG00000046022 2435 1.611 0.868 - - - - - 0.743 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
95. fam89a ENSDARG00000079979 4375 1.604 0.820 - - - - 0.784 - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
96. mrpl40 ENSDARG00000043554 2198 1.603 - - - - 0.883 - 0.720 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
97. rac1 rac1 7341 1.603 - - - - - 0.831 0.772 - -
98. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.599 - - - - - 0.864 0.735 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
99. TNRC6B ENSDARG00000074161 2464 1.598 - - - - 0.897 - 0.701 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
100. cib1 ENSDARG00000103118 291 1.598 0.857 - - - - 0.741 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]

There are 1865 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA