Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prrx1b

Gene Name Gene ID Reads Annotation
prrx1b ENSDARG00000042027 1128 paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]










Genes with expression patterns similar to prrx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prrx1b ENSDARG00000042027 1128 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
2. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 2.515 - 0.962 - - - - 0.791 0.762 - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
3. hoxa13a ENSDARG00000100312 543 2.417 - - - - 0.745 - - 0.865 0.807 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
4. zgc:56064 1275 2.3 - - - - - - 0.725 0.862 0.713 zgc:56064, transcript variant X1
5. boka ENSDARG00000052129 1246 2.266 - - - - - 0.715 0.750 0.801 - BOK, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-040801-131]
6. si:ch211-218c6.8 ENSDARG00000092364 1270 1.849 - 0.995 - - - 0.854 - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
7. vps4b ENSDARG00000069175 1922 1.831 - 0.983 - - - - 0.848 - - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
8. sar1b ENSDARG00000103403 1699 1.821 - 0.973 - - - - - 0.848 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
9. USO1 ENSDARG00000019581 1617 1.784 - 0.979 - - - - - 0.805 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
10. tnfrsf19 ENSDARG00000041869 796 1.735 - 0.993 - - - - 0.742 - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
11. clcn5 clcn5 492 1.735 - 0.981 - - - - - 0.754 -
12. gna12a ENSDARG00000025826 1769 1.728 - 0.981 - - - - 0.747 - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
13. il1b ENSDARG00000098700 27 1.692 - - - - 0.892 0.800 - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
14. epas1a ENSDARG00000008697 3225 1.682 - 0.909 - - - - - 0.773 - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
15. tmem176l.4 ENSDARG00000074390 1886 1.672 - 0.941 - - - 0.731 - - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
16. diabloa ENSDARG00000104172 2192 1.664 - 0.893 - - - - 0.771 - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
17. slc25a36b ENSDARG00000015915 1750 1.661 - - - - - 0.736 0.925 - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
18. zgc:92061 zgc:92061 21304 1.656 - - - - 0.765 0.891 - - -
19. BX649554.3_1 BX649554.3_1 1071 1.655 - - - - 0.883 - - - 0.772
20. mospd2 ENSDARG00000026024 854 1.645 - - - - - 0.806 0.839 - - motile sperm domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-1]
21. ecm2 ENSDARG00000071549 1527 1.644 - - - - - 0.865 - - 0.779 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
22. cc2d1b ENSDARG00000099445 253 1.637 - - - - - - 0.785 0.852 - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
23. clptm1l ENSDARG00000021048 1234 1.631 - - - - - 0.774 - - 0.857 CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
24. si:dkeyp-104f11.9 ENSDARG00000096715 81 1.627 - - - - 0.763 - - 0.864 - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
25. CU855890.3 CU855890.3 307 1.626 - - - - - - 0.824 0.802 -
26. napepld ENSDARG00000009252 228 1.621 - - - - - - 0.763 0.858 - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
27. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1.619 - - - - - 0.884 0.735 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
28. EMILIN3 1347 1.619 0.862 - - - - - 0.757 - - elastin microfibril interfacer 3
29. BX842696.1 BX842696.1 319 1.619 - - - - - 0.873 0.746 - -
30. IRF2 ENSDARG00000040465 453 1.618 - - - - - - 0.888 - 0.730 interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
31. zgc:165481 ENSDARG00000060092 95 1.615 - - - - 0.891 - - - 0.724 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
32. abhd16a ENSDARG00000078929 1115 1.614 - - - - - 0.782 0.832 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
33. snx29 ENSDARG00000077317 239 1.611 - - - - - - 0.789 0.822 - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
34. FAM109B FAM109B 470 1.598 - - - - - - - 0.887 0.711
35. ptx3a ENSDARG00000068275 589 1.594 - - - - - - - 0.882 0.712 pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
36. TEP1 ENSDARG00000038713 289 1.591 - - - - - 0.730 - 0.861 - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
37. si:ch73-196i15.3 ENSDARG00000094281 1005 1.591 - - - - 0.885 0.706 - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
38. vox ENSDARG00000099761 801 1.585 - - - - - - 0.751 0.834 - ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
39. gbgt1l4 ENSDARG00000068503 1009 1.584 - - - - - 0.768 - 0.816 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
40. si:dkey-27i16.3 si:dkey-27i16.3 494 1.582 - - - - - - 0.801 0.781 -
41. RBMS1 RBMS1 258 1.581 - - - - - - 0.734 0.847 -
42. uhrf1bp1l ENSDARG00000004055 419 1.577 - - - - - - 0.758 0.819 - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
43. zgc:174573 ENSDARG00000079035 89 1.573 - - - - 0.846 0.727 - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
44. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.564 - - - - - - - 0.744 0.820 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
45. slc44a1b ENSDARG00000090982 240 1.564 - - - - 0.710 - - 0.854 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
46. cln6a ENSDARG00000077584 1090 1.558 - - - - - - - 0.805 0.753 CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
47. PHLDB2 PHLDB2 1164 1.557 - - - - - - 0.817 - 0.740
48. sphk2 ENSDARG00000069893 1518 1.552 0.745 - - - - - 0.807 - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
49. aldh2.2 ENSDARG00000028087 303 1.549 0.725 - - - - - 0.824 - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
50. kazald2 ENSDARG00000078518 3062 1.544 - - - - - - - 0.720 0.824 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
51. cited2 ENSDARG00000030905 1319 1.543 - - - - - - 0.740 - 0.803 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:ZFIN;Acc:ZDB-GENE-041010-141]
52. hapln1b ENSDARG00000068516 1097 1.539 - - - - - 0.729 - - 0.810 hyaluronan and proteoglycan link protein 1b [Source:ZFIN;Acc:ZDB-GENE-050920-1]
53. ribc1 ENSDARG00000055739 32 1.531 - - - - 0.806 - - - 0.725 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
54. taok3a ENSDARG00000060751 254 1.53 0.730 - - - - 0.800 - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
55. zgc:92360 ENSDARG00000038151 2161 1.528 - - - - - - - 0.789 0.739 zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
56. tnfaip8l2b ENSDARG00000046148 1133 1.526 - - - - - - 0.731 0.795 - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
57. arl10 37 1.522 - - - - - 0.800 - - 0.722 ADP-ribosylation factor-like 10
58. slc30a1b ENSDARG00000053896 293 1.522 0.726 - - - - - 0.796 - - solute carrier family 30 (zinc transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-43]
59. guk1a ENSDARG00000030340 517 1.521 - - - - 0.732 - - - 0.789 guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
60. pvalb8 ENSDARG00000037790 1362 1.52 - - - - - - 0.716 0.804 - parvalbumin 8 [Source:ZFIN;Acc:ZDB-GENE-030805-3]
61. si:ch211-203c7.2 si:ch211-203c7.2 885 1.52 - - - - 0.703 - - - 0.817
62. g6pca.1 ENSDARG00000031616 401 1.51 - - - - - 0.784 0.726 - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
63. LYRM9 ENSDARG00000075528 329 1.509 - - - - - 0.744 - - 0.765 LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
64. anxa1a ENSDARG00000026726 23173 1.507 - 0.802 - - - - 0.705 - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
65. mmp11a ENSDARG00000026325 133 1.504 - - - - - 0.767 0.737 - - matrix metallopeptidase 11a [Source:ZFIN;Acc:ZDB-GENE-070817-3]
66. aamdc ENSDARG00000103957 173 1.502 - - - - - - 0.728 0.774 - adipogenesis associated, Mth938 domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-64]
67. prrc1 ENSDARG00000044304 1567 1.501 - - - - - 0.741 - 0.760 - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
68. ankhb ENSDARG00000014969 328 1.498 - - - - - 0.737 0.761 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
69. has2 ENSDARG00000036987 349 1.497 - - - - - - 0.752 - 0.745 hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
70. mapk1 ENSDARG00000027552, ENSDARG00000111915 1969 1.471 - - - - - - 0.756 0.715 - mitogen-activated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-2]
71. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 1.471 - - - - - 0.710 0.761 - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
72. ctgfb ENSDARG00000104292 69 1.469 - - - - - 0.742 - - 0.727 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
73. tram1 ENSDARG00000019137, ENSDARG00000109629 8309 1.467 - - - - - 0.732 - - 0.735 translocation associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-021011-1]
74. cdkn1ba ENSDARG00000029018 1431 1.462 - - - - - 0.748 - 0.714 - cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]
75. nde1 ENSDARG00000103902 557 1.451 - - - - - 0.741 0.710 - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
76. akt2l ENSDARG00000103612 537 1.447 0.732 - - - - - 0.715 - - v-akt murine thymoma viral oncogene homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040121-5]
77. cyp2v1 ENSDARG00000018485 694 1.441 0.713 - - - - - 0.728 - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
78. zgc:113333 ENSDARG00000038242 797 1.44 0.713 - - - - - 0.727 - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
79. esrrga ENSDARG00000004861 805 1.423 - - - - 0.706 - - - 0.717 estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
80. KIF26B KIF26B 901 1.422 - - - - - 0.712 - 0.710 -
81. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 1.41 - - - - - - 0.702 - 0.708 EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
82. chpfa ENSDARG00000078392 1427 0.998 - 0.998 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
83. jhdm1da jhdm1da 512 0.997 - 0.997 - - - - - - -
84. im:7136729 im:7136729 1625 0.997 - 0.997 - - - - - - -
85. ubn2 ubn2 534 0.997 - 0.997 - - - - - - -
86. stxbp5b ENSDARG00000029234 760 0.996 - 0.996 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
87. acadsb ENSDARG00000076780 2382 0.996 - 0.996 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
88. larp1 ENSDARG00000101722 976 0.996 - 0.996 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
89. cebpa ENSDARG00000036074 751 0.996 - 0.996 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
90. prr12a ENSDARG00000074229 1668 0.996 - 0.996 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
91. zgc:123295 ENSDARG00000056324 361 0.996 - 0.996 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
92. cenpl ENSDARG00000038802 696 0.996 - 0.996 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
93. ptpn9a ENSDARG00000077495 2295 0.995 - 0.995 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
94. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.995 - 0.995 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
95. igsf9a ENSDARG00000075864 1870 0.995 - 0.995 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
96. SETDB2 ENSDARG00000101462 249 0.995 - 0.995 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
97. scn3b ENSDARG00000062359 242 0.995 - 0.995 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
98. ptk6a ENSDARG00000017947 682 0.995 - 0.995 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
99. dhrs9 ENSDARG00000019260 250 0.995 - 0.995 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
100. mis18a ENSDARG00000035333 555 0.995 - 0.995 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]

There are 1400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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