Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prrx1a

Gene Name Gene ID Reads Annotation
prrx1a ENSDARG00000033971 1786 paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]










Genes with expression patterns similar to prrx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prrx1a ENSDARG00000033971 1786 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
2. LPHN2 LPHN2 1971 3.013 0.800 0.711 - - 0.735 - 0.767 - -
3. stt3b ENSDARG00000001890 1836 2.262 - - - - 0.814 0.711 - 0.737 - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
4. sra1 ENSDARG00000053619 2799 1.814 - - - - 0.874 0.940 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
5. im:7154842 im:7154842 434 1.776 - - - - 0.866 0.910 - - -
6. dscc1 ENSDARG00000019907 720 1.766 - - - - 0.826 0.940 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
7. tgm1l4 ENSDARG00000101407 800 1.761 - 0.844 - - - 0.917 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
8. dbnla ENSDARG00000008170 2129 1.738 - - - - 0.820 0.918 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
9. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 1.732 - 0.864 - - - - 0.868 - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
10. C2CD2 ENSDARG00000105000 2573 1.721 - - - - 0.814 0.907 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
11. ppt1 ENSDARG00000039980 1599 1.713 - 0.884 - - - 0.829 - - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
12. dchs1b ENSDARG00000079850 831 1.712 - - - - 0.810 0.902 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
13. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.71 - 0.841 - - - 0.869 - - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
14. FBXW12 FBXW12 658 1.687 - - - - - 0.880 0.807 - -
15. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.68 - - - - 0.773 0.907 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
16. ZNF576 ZNF576 1447 1.671 - - - - 0.841 0.830 - - -
17. si:ch211-198b3.1 si:ch211-198b3.1 765 1.667 - - - - 0.902 0.765 - - -
18. si:ch211-210c8.6 ENSDARG00000017811 908 1.667 - - - - - 0.939 0.728 - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
19. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.661 - - - - - 0.917 0.744 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
20. pex13 ENSDARG00000071037 738 1.653 - - - - - 0.907 0.746 - - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
21. nr1d2b ENSDARG00000009594 1144 1.647 - - - - - 0.935 0.712 - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
22. rabac1 ENSDARG00000004171 2708 1.646 - 0.722 - - - 0.924 - - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
23. TUBGCP6 1991 1.642 - - - - 0.860 - - - 0.782 tubulin, gamma complex associated protein 6
24. gstp1 ENSDARG00000104068 12698 1.635 - 0.815 - - 0.820 - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
25. numb ENSDARG00000027279 2905 1.632 - 0.779 - - 0.853 - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
26. si:dkey-226l10.6 ENSDARG00000087483 1651 1.627 - - - - 0.829 - - - 0.798 si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
27. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.627 - - - - - 0.899 0.728 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
28. lrp12 ENSDARG00000098845 999 1.617 - - - - 0.862 - - - 0.755 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
29. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.614 - - - - 0.852 0.762 - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
30. cyb5b ENSDARG00000099774 1224 1.604 - 0.762 - - 0.842 - - - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
31. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.602 - 0.738 - - - 0.864 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
32. TSG101 TSG101 1686 1.601 - 0.793 - - 0.808 - - - -
33. tmem203 ENSDARG00000104996 1182 1.6 - - - - 0.830 0.770 - - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
34. nipa2 ENSDARG00000055912 1574 1.596 - - - - - 0.836 0.760 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
35. ptp4a3 ENSDARG00000039997 1964 1.593 - - - - 0.788 0.805 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
36. smg7 ENSDARG00000060767 2759 1.593 - - - - - 0.883 0.710 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
37. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.59 - 0.701 - - - 0.889 - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
38. elovl6l ENSDARG00000038639 1184 1.589 - - - - - 0.888 0.701 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
39. cwf19l2 ENSDARG00000091760 1372 1.585 - 0.764 - - 0.821 - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
40. si:dkey-13i19.8 ENSDARG00000093058 4617 1.585 - - - - - 0.820 - - 0.765 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
41. mrpl40 ENSDARG00000043554 2198 1.575 - - - - 0.771 0.804 - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
42. arl11 ENSDARG00000036637 707 1.575 - - - - 0.838 0.737 - - - ADP-ribosylation factor-like 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3410]
43. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.57 - 0.735 - - 0.835 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
44. mtss1l mtss1l 2494 1.57 - - - - 0.831 - - - 0.739
45. fynrk 527 1.566 - 0.771 - - - - 0.795 - - fyn-related Src family tyrosine kinase
46. arpc5a ENSDARG00000039142 5482 1.565 - 0.742 - - - 0.823 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
47. mid1ip1b ENSDARG00000019302 1589 1.561 - 0.845 - - - 0.716 - - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
48. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.555 - - - - - 0.790 0.765 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
49. scinlb ENSDARG00000058348 1466 1.555 - 0.743 - - - 0.812 - - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
50. tuft1b ENSDARG00000071010 909 1.554 - - - - - 0.834 0.720 - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
51. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.548 - 0.755 - - - 0.793 - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
52. hoxa13a ENSDARG00000100312 543 1.543 - - - - - - 0.778 0.765 - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
53. zgc:172075 ENSDARG00000076146 93 1.54 - - - - - 0.809 0.731 - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
54. mapk3 ENSDARG00000070573 6842 1.539 - 0.752 - - 0.787 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
55. mboat2a ENSDARG00000031845 1255 1.537 - 0.712 - - - - 0.825 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
56. agpat2 ENSDARG00000101139 1227 1.537 - 0.762 - - - 0.775 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) [Source:ZFIN;Acc:ZDB-GENE-061103-541]
57. hsdl2 ENSDARG00000002523 2746 1.527 - 0.706 - - - - - - 0.821 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
58. cacybp ENSDARG00000014731 2650 1.526 - 0.738 - - 0.788 - - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
59. knop1 ENSDARG00000077721 2198 1.52 - - - - 0.773 0.747 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
60. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.519 - 0.745 - - 0.774 - - - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
61. tjp2a ENSDARG00000063309 1947 1.514 - 0.716 - - - 0.798 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
62. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.512 - - - - 0.745 - 0.767 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
63. IKZF2 ENSDARG00000069111 1366 1.511 - - - - 0.749 - 0.762 - - IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
64. nrip1b ENSDARG00000068894 2699 1.509 - - - - - 0.753 0.756 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
65. cyp7c1 cyp7c1 1214 1.508 - 0.709 - - - 0.799 - - -
66. ef1 1343 1.506 - 0.729 - - - 0.777 - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
67. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.503 - 0.703 - - - 0.800 - - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
68. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.502 - 0.740 - - 0.762 - - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
69. arpc2 ENSDARG00000075989 22423 1.496 - 0.766 - - - - 0.730 - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
70. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.496 - 0.745 - - - - 0.751 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
71. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.492 0.722 - - - - 0.770 - - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
72. csrp1a ENSDARG00000006603 5188 1.491 - 0.727 - - 0.764 - - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
73. TANC2 TANC2 1104 1.49 0.762 - - - - 0.728 - - -
74. crabp1b ENSDARG00000035904 2753 1.487 - - - 0.766 - - 0.721 - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
75. zgc:91985 zgc:91985 1517 1.486 - 0.756 - - - - 0.730 - -
76. FRMD1 FRMD1 556 1.485 0.776 0.709 - - - - - - -
77. c7a ENSDARG00000042172 716 1.482 - - - - - 0.732 0.750 - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
78. actn1 ENSDARG00000007219 2919 1.478 - 0.705 - - - 0.773 - - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
79. spata13 ENSDARG00000062837 5330 1.476 - 0.748 - - - - 0.728 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
80. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.476 - 0.755 - - - 0.721 - - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
81. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 1.466 - 0.709 - - - - 0.757 - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
82. rhbdf1 rhbdf1 1608 1.461 0.714 0.747 - - - - - - -
83. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.458 - - - - - 0.729 0.729 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
84. frem2b ENSDARG00000102626 1416 1.449 0.744 0.705 - - - - - - - Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
85. parvaa ENSDARG00000043710 3495 1.448 - 0.726 - - 0.722 - - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
86. derl1 ENSDARG00000021905 4698 1.447 - - - - 0.730 - - 0.717 - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
87. snx27a ENSDARG00000033804 2249 1.447 - 0.703 - - 0.744 - - - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
88. gdi1 ENSDARG00000056122 4106 1.438 - 0.703 - - 0.735 - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
89. tax1bp3 ENSDARG00000059177 4324 1.423 - 0.722 - - - - 0.701 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
90. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.42 - 0.702 - - - 0.718 - - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
91. itm2ba ENSDARG00000007098 5686 1.419 - 0.713 - - - - - - 0.706 integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
92. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.967 - - - - - 0.967 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
93. rdh8b ENSDARG00000105060 183 0.961 - - - - - 0.961 - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
94. ik ENSDARG00000004161 3132 0.953 - - - - - 0.953 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
95. sema6d ENSDARG00000002748 133 0.952 - - - - - 0.952 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
96. xrcc1 ENSDARG00000009494 1346 0.951 - - - - - 0.951 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
97. slc12a9 ENSDARG00000060366 293 0.948 - - - - - 0.948 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
98. zgc:101569 ENSDARG00000038876 1525 0.948 - - - - - 0.948 - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
99. stra13 598 0.947 - - - - - 0.947 - - - stimulated by retinoic acid 13 homolog (mouse)
100. tefb ENSDARG00000098103 370 0.947 - - - - - 0.947 - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]

There are 1413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA