Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prrc1

Gene Name Gene ID Reads Annotation
prrc1 ENSDARG00000044304 1567 proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]










Genes with expression patterns similar to prrc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prrc1 ENSDARG00000044304 1567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
2. CU928070.1 CU928070.1 1152 2.529 - 0.981 - - - - 0.842 0.706 -
3. MAP4K4 ENSDARG00000098670 4665 1.916 - 0.983 - - 0.933 - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
4. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.909 - 0.954 - - 0.955 - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
5. CABZ01057907.1 CABZ01057907.1 1140 1.862 - 0.990 - - - - 0.872 - -
6. CU655970.1 CU655970.1 2123 1.851 - 0.979 - - - - 0.872 - -
7. pik3r3a ENSDARG00000103038 1132 1.849 - - - - 0.993 0.856 - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
8. nr2f6a ENSDARG00000003607 4779 1.82 - 0.968 - - 0.852 - - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
9. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.816 - - - - 0.987 - 0.829 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
10. otx2 766 1.801 - - - - 0.992 - 0.809 - - orthodenticle homeobox 2, transcript variant X2
11. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.797 - - - - 0.979 - 0.818 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
12. bag6 ENSDARG00000075892 3782 1.789 - 0.982 - - - - 0.807 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
13. tmem110 497 1.774 - 0.988 - - - - 0.786 - - transmembrane protein 110
14. HEATR6 ENSDARG00000073686 241 1.762 - 0.989 - - - - 0.773 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
15. wls ENSDARG00000009534 8719 1.755 - 0.915 - - 0.840 - - - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
16. lpar2b ENSDARG00000042561 1086 1.75 - 0.987 - - - - 0.763 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
17. C18H15orf39 C18H15orf39 1125 1.739 - 0.981 - 0.758 - - - - -
18. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.731 - - - - 0.992 - 0.739 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
19. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.729 - 0.918 - - - - - 0.811 - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
20. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.728 - - - - 0.983 - 0.745 - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
21. arhgap11a ENSDARG00000100019 1642 1.717 - - - - 0.992 - 0.725 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
22. gle1 ENSDARG00000043559 1362 1.714 - 0.987 - - - - 0.727 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
23. CABZ01055343.2 CABZ01055343.2 10312 1.703 - - - - 0.987 - - 0.716 -
24. trappc4 ENSDARG00000027418 1491 1.697 - 0.996 - - - - 0.701 - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
25. rtn3_1 ENSDARG00000091348 3290 1.688 - 0.977 - - - - 0.711 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
26. vps25 ENSDARG00000059079 3747 1.683 - 0.832 - - - - 0.851 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
27. tbc1d17 ENSDARG00000005927 1769 1.673 - 0.969 - - - - 0.704 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
28. serpinh1a ENSDARG00000075954 6488 1.643 - 0.728 - - 0.915 - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
29. cdk2ap2 ENSDARG00000103145 8024 1.639 - 0.804 - - - - 0.835 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
30. gng5 ENSDARG00000039830 12102 1.627 - 0.896 - - - - 0.731 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
31. glrx ENSDARG00000028106 16225 1.606 - 0.897 - - - - 0.709 - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
32. si:rp71-3c13.3 si:rp71-3c13.3 128 1.592 - - - - - 0.775 0.817 - -
33. tmem168a ENSDARG00000068705 498 1.592 - - - - - 0.778 0.814 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
34. slc38a6 ENSDARG00000054312 112 1.591 - - - - - 0.705 0.886 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
35. hddc2 ENSDARG00000034957 905 1.588 - - - - - 0.770 0.818 - - HD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-394]
36. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.577 - - - - - 0.726 0.851 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
37. stk38a ENSDARG00000019973 1343 1.572 - - - - - - 0.778 0.794 - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
38. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.565 - - - - - 0.839 0.726 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
39. mia2 ENSDARG00000099973 139 1.562 - - - - - 0.740 0.822 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
40. smg8 ENSDARG00000061378 1164 1.549 - - - - - - 0.829 0.720 - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
41. gstm3 gstm3 1164 1.544 - - - - - 0.743 0.801 - -
42. megf6a ENSDARG00000079199 103 1.541 - - - - - 0.791 0.750 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
43. cnstb ENSDARG00000042759 105 1.527 - - - - - 0.756 0.771 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
44. FRMD4A ENSDARG00000042249 2883 1.525 - - - - - 0.784 0.741 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
45. fam162a ENSDARG00000063344 1812 1.524 - 0.738 - - - - 0.786 - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
46. CARD11 ENSDARG00000052741 249 1.515 - - - - - 0.797 0.718 - - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
47. zgc:153924 507 1.513 - - - - - - 0.802 0.711 - zgc:153924
48. prrx1b ENSDARG00000042027 1128 1.501 - - - - - 0.741 - 0.760 - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
49. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 1.495 0.709 - - - - - 0.786 - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
50. cmtm3 ENSDARG00000008811, ENSDARG00000115417 502 1.486 - - - - - 0.709 0.777 - - CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]
51. psmd4b ENSDARG00000023279 2002 1.48 - - - - - - 0.750 0.730 - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
52. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.476 - - - - - 0.753 0.723 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
53. prkceb ENSDARG00000069928, ENSDARG00000114025 330 1.473 - - - - - - 0.762 0.711 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
54. rhpn2 ENSDARG00000014577 2537 1.473 - - - - - - 0.703 0.770 - rhophilin, Rho GTPase binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9927]
55. arid3b ENSDARG00000104034 16303 1.464 - 0.750 - - 0.714 - - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
56. vcanb ENSDARG00000009401 3611 1.463 - - - - - 0.719 0.744 - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
57. trim35-28 ENSDARG00000021021 1380 1.462 - - - - - 0.727 - 0.735 - tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
58. glmna ENSDARG00000058267 597 1.458 - - - - - - 0.708 0.750 - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
59. zgc:174935 ENSDARG00000079255 532 1.45 - - - - - - 0.731 0.719 - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
60. tefb ENSDARG00000098103 370 1.447 - - - - - - 0.728 0.719 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
61. rgs3b ENSDARG00000035132 876 1.442 - - - - - - 0.727 - 0.715 regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
62. hmbox1b 597 0.996 - 0.996 - - - - - - - homeobox containing 1 b, transcript variant X3
63. WIPF3 WIPF3 804 0.996 - - - - 0.996 - - - -
64. ccdc53 982 0.995 - - - - 0.995 - - - - coiled-coil domain containing 53
65. cog4 ENSDARG00000054264 785 0.995 - - - - 0.995 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
66. il12rb2l ENSDARG00000074850 407 0.995 - - - - 0.995 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
67. ttc13 ENSDARG00000063242 1360 0.994 - - - - 0.994 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
68. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.994 - - - - 0.994 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
69. cdkn1a ENSDARG00000076554 591 0.994 - - - - 0.994 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
70. zc3h15 ENSDARG00000015889 3861 0.994 - 0.994 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
71. cdk5 ENSDARG00000056683 1998 0.994 - - - - 0.994 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
72. rnaseh1 ENSDARG00000042571 922 0.994 - - - - 0.994 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
73. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.994 - - - - 0.994 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
74. USP2_1 USP2_1 544 0.994 - - - - 0.994 - - - -
75. CABZ01027552.1 CABZ01027552.1 760 0.994 - - - - 0.994 - - - -
76. tarsl2 ENSDARG00000092774 505 0.994 - - - - 0.994 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
77. SNORA70 SNORA70 511 0.994 - - - - 0.994 - - - -
78. sh3bp5a ENSDARG00000100529 642 0.994 - - - - 0.994 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
79. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.994 - - - - 0.994 - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
80. armc9 ENSDARG00000087299 459 0.994 - - - - 0.994 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
81. CT573468.1 CT573468.1 283 0.994 - 0.994 - - - - - - -
82. ticrr ENSDARG00000045605 739 0.993 - - - - 0.993 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
83. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.993 - - - - 0.993 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
84. zgc:110699 ENSDARG00000017474 381 0.993 - - - - 0.993 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
85. ing5b ENSDARG00000068175 2502 0.993 - 0.993 - - - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
86. AP3B1 2363 0.993 - - - - 0.993 - - - - adaptor related protein complex 3 beta 1 subunit
87. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 0.993 - 0.993 - - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
88. atp1b4 ENSDARG00000053262 1337 0.993 - - - - 0.993 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
89. slc20a1b ENSDARG00000010641 2564 0.992 - - - - 0.992 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
90. pik3cb ENSDARG00000075253 2075 0.992 - - - - 0.992 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
91. adcyap1b ENSDARG00000027740 1539 0.992 - - - - 0.992 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
92. si:dkey-251i10.2 ENSDARG00000093957 4424 0.992 - - - - 0.992 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
93. wu:fc26g07 wu:fc26g07 1165 0.992 - - - - 0.992 - - - -
94. USP24 ENSDARG00000059925 1294 0.992 - - - - 0.992 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
95. akirin2 ENSDARG00000058729 13245 0.992 - 0.992 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
96. mafk ENSDARG00000100947 1460 0.992 - - - - 0.992 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
97. gab1 ENSDARG00000037018 1489 0.992 - - - - 0.992 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
98. rbpja ENSDARG00000003398 1309 0.992 - - - - 0.992 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
99. sh3glb1 sh3glb1 1335 0.992 - 0.992 - - - - - - -
100. sf3b3_1 ENSDARG00000103553 1191 0.992 - - - - 0.992 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA