Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prps1b

Gene Name Gene ID Reads Annotation
prps1b ENSDARG00000037506, ENSDARG00000110507 4170 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]










Genes with expression patterns similar to prps1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
2. kif11 ENSDARG00000010948 4973 2.947 - 0.731 - - 0.743 - - 0.703 0.770 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
3. sf3a1 ENSDARG00000041887 6702 2.598 - - - - 0.968 - 0.825 - 0.805 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
4. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 2.475 - - - - 0.976 0.727 - - 0.772 activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
5. HOMEZ HOMEZ 1824 2.436 - - - - - 0.876 0.834 - 0.726
6. smc1al ENSDARG00000058203 8838 2.42 - - - - 0.931 - - 0.723 0.766 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
7. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.405 - 0.722 - - - - - 0.910 0.773 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
8. luc7l3 ENSDARG00000014366 4416 2.397 - 0.764 - - - - 0.827 - 0.806 LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
9. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 2.389 - - - - 0.977 - 0.710 - 0.702 progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
10. smarca5 ENSDARG00000052348 15433 2.23 - - - - 0.716 - 0.756 - 0.758 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
11. klc2 3058 1.921 - - - - 0.976 - - 0.945 - kinesin light chain 2
12. CR387996.1 ENSDARG00000097774 3037 1.905 - - - - 0.979 - - 0.926 -
13. boc ENSDARG00000074335 4832 1.892 - - - - 0.969 - - 0.923 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
14. dido1 ENSDARG00000057940 3819 1.868 - - - - 0.950 - - 0.918 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
15. si:ch211-79l20.4 1305 1.867 - - - - 0.975 - - 0.892 - si:ch211-79l20.4, transcript variant X3
16. ctnnbip1 ENSDARG00000038954 2519 1.864 - - - - 0.973 - - 0.891 - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
17. selt2 12741 1.843 - - 0.918 - 0.925 - - - - selenoprotein T, 2
18. puf60b ENSDARG00000001241 13827 1.836 - - 0.888 - - - - 0.948 - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
19. dennd5a ENSDARG00000017006 3426 1.834 - - - - - - 0.898 0.936 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
20. plk4 ENSDARG00000004576 688 1.829 - - - - - - 0.878 0.951 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
21. AP3B2 1874 1.828 - - - - 0.869 - - 0.959 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
22. bag1 ENSDARG00000020895 1660 1.79 - - - - 0.972 - 0.818 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
23. cdk7 ENSDARG00000051916 746 1.781 - - - - - - 0.846 0.935 - cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
24. azi1_1 azi1_1 1375 1.778 - - - - 0.975 - 0.803 - -
25. aebp1 ENSDARG00000091726 906 1.775 - - - - - - 0.849 0.926 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
26. rbm8a ENSDARG00000016516 8789 1.769 - - - - - - 0.832 0.937 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
27. CR954963.1 ENSDARG00000097153 1135 1.763 - - - - 0.980 - 0.783 - -
28. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.76 - - - - 0.906 - - - 0.854 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
29. btg2 ENSDARG00000020298 6616 1.757 - - - - 0.934 - - 0.823 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
30. emc3 ENSDARG00000020607 3406 1.756 - - - - - - 0.811 0.945 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
31. NAIF1_1 NAIF1_1 1336 1.755 - - - - - - 0.827 0.928 -
32. si:ch211-194k22.8 ENSDARG00000096711 1318 1.753 - - - - - - 0.797 0.956 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
33. psma2 ENSDARG00000040121 2504 1.753 - - - - - - 0.798 0.955 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
34. rqcd1 2301 1.752 - - - - 0.977 - 0.775 - - RCD1 required for cell differentiation1 homolog (S. pombe)
35. rtn3_1 ENSDARG00000091348 3290 1.742 - - - - 0.965 - 0.777 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
36. top2a ENSDARG00000024488 4273 1.741 - - - - - - - 0.950 0.791 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
37. b4galt7 ENSDARG00000021899 546 1.739 - - - - - - 0.818 0.921 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
38. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.735 - - - - - - 0.863 0.872 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
39. psmd11a ENSDARG00000060150 4529 1.733 - - 0.942 - - - 0.791 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
40. GANAB_1 GANAB_1 685 1.73 - - - - - - 0.782 0.948 -
41. spc25 ENSDARG00000078433 1316 1.725 - - - - - - 0.761 0.964 - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
42. ppp2r2d ENSDARG00000102009 5710 1.724 - - - - 0.969 - 0.755 - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
43. MDFIC ENSDARG00000074223 781 1.719 - - - - - - 0.773 0.946 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
44. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 1.718 - 0.745 - - 0.973 - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
45. CU862021.1 CU862021.1 5925 1.716 - - - - - - 0.828 0.888 -
46. SIPA1L3 ENSDARG00000061699 268 1.712 - - - - - - 0.774 0.938 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
47. nkain1 ENSDARG00000006859 1961 1.71 - - - - 0.981 - - - 0.729 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
48. nop58 ENSDARG00000104353 8497 1.71 - - 0.927 - - - - - 0.783 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
49. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.707 - - 0.936 - - - 0.771 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
50. commd3 ENSDARG00000045402 1601 1.706 0.731 - - - 0.975 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
51. GATAD2B ENSDARG00000005834 3855 1.703 - - - - - - - 0.961 0.742 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
52. ubtf ENSDARG00000035066 4070 1.702 - - - - 0.973 - - - 0.729 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
53. snx12 ENSDARG00000019060 9563 1.697 - - - - 0.959 - 0.738 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
54. irf2a ENSDARG00000007387 915 1.697 - - - - - - 0.742 0.955 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
55. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.696 - 0.720 - - 0.976 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
56. LDLRAD4 LDLRAD4 1237 1.696 - - - - - - - 0.960 0.736
57. Sep-06 Sep-06 5465 1.695 - - - - - - - 0.936 0.759
58. C12H10orf118 C12H10orf118 964 1.692 - - - - - - 0.792 0.900 -
59. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.688 - 0.721 - - 0.967 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
60. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.688 - - - - - - - 0.938 0.750 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
61. si:ch211-207m11.3 si:ch211-207m11.3 401 1.682 - - - - - - 0.814 0.868 -
62. arl4aa ENSDARG00000099918 1391 1.676 - 0.727 - - - - - 0.949 - ADP-ribosylation factor-like 4aa [Source:ZFIN;Acc:ZDB-GENE-040426-1878]
63. MATR3 MATR3 3962 1.675 - - - - 0.945 - 0.730 - -
64. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.674 - - - - - - - 0.939 0.735 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
65. elmo1 ENSDARG00000098753 6966 1.674 - 0.713 - - - - - 0.961 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
66. apex1 ENSDARG00000045843 6345 1.67 - 0.723 - - 0.947 - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
67. psma6b ENSDARG00000013966 4410 1.669 - - - - - - 0.739 0.930 - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
68. c1d ENSDARG00000021112 2839 1.666 - - - - - - - 0.928 0.738 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
69. nme3 ENSDARG00000100990 3889 1.665 - - - - 0.761 - - 0.904 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
70. dnaja2l ENSDARG00000010745 2367 1.661 - - - - - - - 0.877 0.784 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
71. cadm3 ENSDARG00000057013 1545 1.661 - - - - - - - 0.946 0.715 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
72. atad5a ENSDARG00000070568 1840 1.659 - - - - - - 0.873 - 0.786 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
73. ube2i ube2i 13024 1.656 - - - - 0.728 - - 0.928 -
74. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.656 - - - - - - 0.783 0.873 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
75. foxp1b ENSDARG00000014181 2594 1.656 - - - - - - - 0.943 0.713 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
76. hmgb3a ENSDARG00000056725 15668 1.653 - - - - - - - 0.941 0.712 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
77. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.652 - - - - 0.936 - - - 0.716 exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
78. ndfip2 ENSDARG00000033928 3129 1.65 - - - - 0.949 - 0.701 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
79. fbxl5 ENSDARG00000043046 1403 1.649 - - - - - 0.702 - 0.947 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
80. znf319 znf319 3027 1.648 - - - - - - - 0.908 0.740
81. fzd3a ENSDARG00000021664 1958 1.648 - - - - - - - 0.875 0.773 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
82. stmn1a ENSDARG00000004169 21169 1.647 - - - - 0.870 - - - 0.777 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
83. HIPK1_1 HIPK1_1 8096 1.647 - - - - - - 0.855 - 0.792
84. yth2 yth2 3716 1.645 - 0.736 - - - - - 0.909 -
85. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.644 - - - - - - - 0.903 0.741 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
86. nt5c2a ENSDARG00000039399 3062 1.642 - - - - - 0.723 - 0.919 - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
87. lsm7 ENSDARG00000058328 7191 1.641 - - - - 0.825 - - - 0.816 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
88. zgc:171220 ENSDARG00000102959 164 1.64 - - - - - 0.713 - 0.927 - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
89. nucks1b ENSDARG00000012777 4468 1.64 - - - - - 0.733 - 0.907 - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
90. tnfaip3 ENSDARG00000027777 1066 1.639 - - - - - - - 0.906 0.733 tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
91. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.637 - - - - - - - 0.912 0.725 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
92. spcs2 ENSDARG00000042823 10032 1.636 - - - - - - 0.791 0.845 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
93. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.634 - - 0.912 - - - - - 0.722 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
94. snrpf ENSDARG00000105037 10241 1.629 - - 0.919 0.710 - - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
95. ppp6r3 ENSDARG00000013379 2912 1.626 - - - - - - - 0.910 0.716 protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
96. foxn4 ENSDARG00000010591 2332 1.625 - - - - 0.874 - - 0.751 - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
97. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.623 - - - - - - - 0.857 0.766 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
98. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.622 - - - - - - 0.824 - 0.798 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
99. tgif1 ENSDARG00000059337 4020 1.621 - - - - 0.860 - - - 0.761 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
100. agpat4 ENSDARG00000069044 4487 1.619 - 0.728 - - - - - 0.891 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]

There are 1712 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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