Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prph

Gene Name Gene ID Reads Annotation
prph ENSDARG00000028306 242 peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]










Genes with expression patterns similar to prph

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prph ENSDARG00000028306 242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
2. nrsn1 ENSDARG00000111235 123 3.455 0.858 0.947 - - - 0.830 0.820 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
3. mapk12b ENSDARG00000006409 2246 3.333 0.827 0.722 - - - 0.877 0.907 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
4. slc17a6b ENSDARG00000041150 823 3.242 0.876 0.734 - - - 0.759 0.873 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
5. MAP6 MAP6 643 3.216 0.835 0.770 - - - 0.742 0.869 - -
6. sez6l2 ENSDARG00000076052 360 3.169 0.744 0.860 - - - 0.706 0.859 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
7. nrarpb ENSDARG00000018958 6225 3.157 0.779 0.715 - - - 0.740 0.923 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
8. amph ENSDARG00000007663 599 3.118 0.746 0.788 - - - 0.736 0.848 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
9. CT025910.1 CT025910.1 143 3.043 0.776 0.734 - - - 0.775 0.758 - -
10. syngr3a ENSDARG00000014871 405 2.747 0.878 0.972 - - - - 0.897 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
11. her15.2 her15.2 1701 2.595 - 0.777 - - - 0.873 0.945 - -
12. plp1a ENSDARG00000103732 3544 2.594 0.787 - - - - 0.896 0.911 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
13. scn1lab ENSDARG00000062744 155 2.592 0.847 - - - - 0.892 0.853 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
14. DTX4 ENSDARG00000076302 2642 2.584 0.833 - - - - 0.880 0.871 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
15. si:ch73-21g5.7 ENSDARG00000093156 9412 2.556 - 0.757 - - - 0.872 0.927 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
16. nes ENSDARG00000088805 2710 2.555 0.795 0.814 - - - - 0.946 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
17. tnika ENSDARG00000056218 728 2.552 - 0.829 - - - 0.820 0.903 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
18. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.535 - 0.903 - - - 0.771 0.861 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
19. CABZ01029738.1 CABZ01029738.1 327 2.53 0.887 0.746 - - - - 0.897 - -
20. hmp19 2554 2.518 0.845 - - - - 0.781 0.892 - - HMP19 protein
21. sox2 ENSDARG00000070913 2763 2.509 - 0.764 - - - 0.818 0.927 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
22. ccdc28b ENSDARG00000011222 528 2.506 0.914 - - - - 0.790 0.802 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
23. rap2ip rap2ip 681 2.499 - 0.860 - - - 0.748 0.891 - -
24. irx1b ENSDARG00000056594 2224 2.498 0.762 0.811 - - - - 0.925 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
25. lhx1a ENSDARG00000014018 958 2.494 0.870 0.860 - - - - 0.764 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
26. her3 ENSDARG00000076857 131 2.492 0.898 0.734 - - - 0.860 - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
27. KCNIP4 ENSDARG00000088100 86 2.489 0.833 - - - - 0.764 0.892 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
28. CU928222.1 ENSDARG00000097436 1662 2.487 - 0.745 - - - 0.809 0.933 - -
29. syt11a ENSDARG00000057913 1145 2.477 - 0.800 - - - 0.761 0.916 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
30. pkib ENSDARG00000053110 527 2.475 0.807 - - - - 0.851 0.817 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
31. mir10d-1 mir10d-1 860 2.468 - 0.810 - - - 0.824 0.834 - -
32. nhlh2 ENSDARG00000025495 1860 2.468 0.815 0.740 - - - - 0.913 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
33. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.467 - 0.803 - - - 0.820 0.844 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
34. dnajc6 ENSDARG00000079891 438 2.466 0.724 - - - - 0.891 0.851 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
35. prdm12b ENSDARG00000007430 914 2.465 0.735 - - - - 0.912 0.818 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
36. slc35g2b ENSDARG00000045447 378 2.462 0.733 0.772 - - - - 0.957 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
37. myt1b ENSDARG00000102879 5411 2.461 - 0.721 - - - 0.817 0.923 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
38. cacng8b ENSDARG00000070626 176 2.461 0.888 - - - - 0.770 0.803 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
39. STMN3 ENSDARG00000038465 1009 2.455 0.799 - - - - 0.781 0.875 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
40. b4galt2 ENSDARG00000077994 480 2.455 0.857 - - - - 0.833 0.765 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
41. ptprnb ENSDARG00000077047 2743 2.455 - 0.839 - - - 0.825 0.791 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
42. pcdh1gc5 ENSDARG00000104826 10052 2.449 - 0.758 - - - 0.761 0.930 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
43. stmn1b ENSDARG00000033655 9491 2.445 0.767 - - - - 0.770 0.908 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
44. gfap ENSDARG00000025301 5584 2.443 0.759 - - - - 0.790 0.894 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
45. stxbp1a ENSDARG00000001994 5154 2.441 - 0.839 - - - 0.732 0.870 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
46. rbfox3 rbfox3 1443 2.433 0.795 0.786 - - - - 0.852 - -
47. bsk146 ENSDARG00000099069 274 2.432 0.881 - - - - 0.703 0.848 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
48. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.421 0.726 0.780 - - - - 0.915 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
49. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.419 - 0.806 - - - 0.712 0.901 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
50. slc18a3a ENSDARG00000006356 1285 2.418 - 0.758 - - - 0.732 0.928 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
51. CT030046.1 CT030046.1 190 2.416 0.881 - - - - 0.830 0.705 - -
52. nxph1 ENSDARG00000033447 182 2.411 - - - - - 0.837 0.798 - 0.776 neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
53. pcsk1nl ENSDARG00000076170 1232 2.41 - 0.755 - - - 0.775 0.880 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
54. dbx1a ENSDARG00000086393 3161 2.403 0.790 0.888 - - - - 0.725 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
55. stmn2a ENSDARG00000033234 2272 2.394 - 0.771 - - - 0.746 0.877 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
56. scrt2 ENSDARG00000056175 4331 2.394 - 0.829 - - - 0.758 0.807 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
57. flrt1b ENSDARG00000075597 465 2.392 0.773 - - - - 0.810 0.809 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
58. kcnj11l ENSDARG00000031438 369 2.388 0.781 - - - - 0.769 0.838 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
59. zic1 ENSDARG00000015567 2520 2.386 0.709 - - - - 0.750 0.927 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
60. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.378 0.838 - - - - 0.792 0.748 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
61. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.371 - 0.719 - - - 0.755 0.897 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
62. atp6v0cb ENSDARG00000036577 3472 2.366 0.716 - - - - 0.737 0.913 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
63. ROBO3_1 ROBO3_1 468 2.365 - 0.712 - - - 0.783 0.870 - -
64. nova2 ENSDARG00000017673 7685 2.363 0.717 0.718 - - - - 0.928 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
65. ksr2 ENSDARG00000094526 134 2.361 - 0.795 - - - 0.795 0.771 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
66. CDK5R1 CDK5R1 562 2.347 0.752 0.726 - - - - 0.869 - -
67. SV2B SV2B 208 2.343 - 0.788 - - - 0.801 0.754 - -
68. KCNS3 KCNS3 82 2.34 - 0.734 - - - 0.762 0.844 - -
69. vim ENSDARG00000010008 3551 2.338 0.701 - - - - 0.708 0.929 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
70. atp6ap1a ENSDARG00000041417 898 2.332 0.731 - - - - 0.833 0.768 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
71. MAP1A MAP1A 847 2.329 - 0.826 - - - 0.706 0.797 - -
72. stap2a ENSDARG00000092810 591 2.317 0.716 - - - - 0.820 0.781 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
73. trim2b ENSDARG00000076174 250 2.308 0.733 - - - - 0.807 0.768 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
74. LINGO2 LINGO2 300 2.296 - 0.739 - - - 0.761 0.796 - -
75. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.293 0.724 - - - - 0.751 0.818 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
76. yjefn3 ENSDARG00000061692 211 2.282 0.824 0.734 - - - 0.724 - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
77. fat3a ENSDARG00000033840 902 2.26 0.804 0.739 - - - - 0.717 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
78. si:ch211-278j3.3 ENSDARG00000020284 478 2.246 0.717 - - - - 0.743 0.786 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
79. TUBB2A TUBB2A 142 2.235 - 0.734 - - - 0.783 0.718 - -
80. TRPC4_1 TRPC4_1 212 2.169 0.703 0.734 - - - 0.732 - - -
81. cldn5a ENSDARG00000043716 3865 1.806 - - - - - 0.899 0.907 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
82. CU856359.2 CU856359.2 182 1.803 - - - - - 0.917 0.886 - -
83. map6 map6 70 1.802 0.918 - - - - - 0.884 - -
84. gphnb ENSDARG00000100851 118 1.8 0.910 - - - - - 0.890 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
85. pdzrn4 ENSDARG00000045687 362 1.791 - - - - - 0.869 0.922 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
86. si:dkey-14d8.6 ENSDARG00000045835 72 1.779 0.926 - - - - - 0.853 - - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
87. eno2 ENSDARG00000014287 2162 1.776 - - - - - 0.855 0.921 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
88. negr1 ENSDARG00000021607 1051 1.774 0.868 - - - - - 0.906 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
89. CLIP3 ENSDARG00000054456 734 1.773 - - - - - 0.845 0.928 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
90. syt12 ENSDARG00000101776 215 1.772 0.878 - - - - - 0.894 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
91. ncana 1537 1.772 - - - - - 0.826 0.946 - - neurocan a
92. atp1b4 ENSDARG00000053262 1337 1.767 - - - - - 0.817 0.950 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
93. scg2a 800 1.763 - 0.915 - - - - 0.848 - - secretogranin II (chromogranin C) a
94. slc1a2b ENSDARG00000102453 3136 1.762 - 0.916 - - - - 0.846 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
95. slc6a1b ENSDARG00000039647 1301 1.761 - - - - - 0.856 0.905 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
96. VSTM2B VSTM2B 149 1.754 - - - - - 0.819 0.935 - -
97. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.751 - 0.861 - - - - 0.890 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
98. lrrc4.1 ENSDARG00000069402 323 1.748 0.898 - - - - - 0.850 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
99. zgc:100906 ENSDARG00000033599 344 1.748 0.920 - - - - - 0.828 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
100. GJD2 GJD2 1351 1.747 0.875 - - - - - 0.872 - -

There are 2139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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