Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf8

Gene Name Gene ID Reads Annotation
prpf8 ENSDARG00000026180 7026 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]










Genes with expression patterns similar to prpf8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf8 ENSDARG00000026180 7026 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
2. ppig ENSDARG00000044431 3427 3.153 - 0.745 0.836 0.802 - - - - 0.770 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
3. cdca7a ENSDARG00000077620 9345 3.146 - - - 0.754 0.706 - 0.928 0.758 - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
4. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 2.928 - - 0.713 0.745 - 0.714 - - 0.756 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
5. rnps1 ENSDARG00000116743 9994 2.892 0.704 - 0.759 - 0.711 0.718 - - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
6. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.725 - - 0.823 - - - 0.952 - 0.950 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
7. kmt2bb ENSDARG00000060697 5230 2.467 - 0.757 - 0.772 - - 0.938 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
8. rbb4l ENSDARG00000015208 5542 2.4 - - 0.751 - 0.849 0.800 - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
9. fastk ENSDARG00000077075 1619 2.396 - 0.746 - - - - 0.921 - 0.729 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
10. h2afvb ENSDARG00000116491 35692 2.364 0.813 0.846 - - - 0.705 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
11. mgll ENSDARG00000036820 747 2.351 - - - 0.751 - 0.707 0.893 - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
12. maf1 ENSDARG00000013122 3365 2.328 - 0.768 - 0.812 - - - - 0.748 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
13. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 2.32 0.709 - - - - 0.825 - 0.786 - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
14. hmgb3a ENSDARG00000056725 15668 2.317 0.793 0.769 - - 0.755 - - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
15. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 2.276 0.709 - - 0.817 - - - 0.750 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
16. anp32e ENSDARG00000054804 11017 2.274 0.804 0.706 - - 0.764 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
17. ENDOD1_5 ENDOD1_5 8723 2.27 0.734 - 0.742 0.794 - - - - -
18. cdkn2aipnl ENSDARG00000053395 5107 2.268 0.786 0.731 0.751 - - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
19. ctnna1 ENSDARG00000102441 7984 2.267 - 0.715 - - - 0.804 - - 0.748 catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
20. snrpf ENSDARG00000105037 10241 2.258 0.799 0.748 - 0.711 - - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
21. wdr5 ENSDARG00000016903 4834 2.235 - - 0.765 - 0.717 - 0.753 - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
22. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 2.226 - - - 0.726 - 0.757 - - 0.743 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
23. hdac1 ENSDARG00000015427 19804 2.218 0.715 - 0.801 - - 0.702 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. pcbp2 ENSDARG00000099039 4248 2.215 - 0.721 - - - - 0.755 0.739 - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
25. myl12.2 ENSDARG00000025326 1887 2.214 - 0.763 - - - 0.723 - - 0.728 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
26. aldh6a1 ENSDARG00000053485 7744 2.21 - 0.701 - 0.782 - - 0.727 - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
27. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.184 - - - 0.749 0.710 0.725 - - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
28. snrpe ENSDARG00000033175 7462 2.137 0.713 0.706 - - - - - - 0.718 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
29. Sep-12 Sep-12 1828 1.767 - - - 0.837 - - 0.930 - -
30. lsm4 ENSDARG00000023852 6083 1.757 - - - - - 0.800 0.957 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
31. mbd3a ENSDARG00000061774 4047 1.749 - - - - - 0.809 0.940 - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
32. stag1b ENSDARG00000062137 1814 1.747 - - - - - - 0.918 0.829 - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
33. dag1 ENSDARG00000016153 10886 1.722 - 0.786 - - - - 0.936 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
34. med14 ENSDARG00000009953 1383 1.705 - - - - - - 0.920 0.785 - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
35. tmem104 ENSDARG00000088560 859 1.691 - - - 0.774 - - 0.917 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
36. mbpb ENSDARG00000089413 3334 1.691 - - - - - 0.779 0.912 - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
37. PRTG PRTG 4714 1.683 0.759 - - - - - 0.924 - -
38. ubtf ENSDARG00000035066 4070 1.681 0.817 - - 0.864 - - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
39. nrf1 ENSDARG00000000018 4683 1.679 - - 0.762 - - - 0.917 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
40. dhx15 ENSDARG00000015392 7496 1.679 - - - 0.741 - - 0.938 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
41. acsbg2 ENSDARG00000004094 2445 1.678 - - - 0.753 - - 0.925 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
42. gnl3 ENSDARG00000006219 3854 1.678 - 0.753 - - - - 0.925 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
43. MAP4K4 ENSDARG00000098670 4665 1.665 0.799 - - - - - 0.866 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
44. cstf3 ENSDARG00000018904 6111 1.665 - - - - - 0.718 0.947 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
45. pdcd10b ENSDARG00000012591 3395 1.657 - - - 0.745 - - 0.912 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
46. fkbp8 ENSDARG00000001734 1709 1.656 - - - - - - 0.923 - 0.733 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
47. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.655 - - - - - - 0.924 - 0.731 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
48. CORO1C CORO1C 5554 1.654 0.708 - - - - - 0.946 - -
49. CDCA4 ENSDARG00000042319 7918 1.653 - - - 0.718 - - 0.935 - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
50. ccdc22 ENSDARG00000052379 2276 1.653 - - - - - - 0.910 - 0.743 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
51. pcyt2 ENSDARG00000043003 3506 1.652 - - - - - 0.734 0.918 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
52. hdgfrp2 7462 1.647 - 0.718 - - - - 0.929 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
53. nhsl1b ENSDARG00000042627 3697 1.641 - - 0.718 - - - 0.923 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
54. histh1l ENSDARG00000035519 12293 1.64 - - - - - 0.766 0.874 - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
55. CWC15 ENSDARG00000013382 8969 1.637 - 0.711 - - - - 0.926 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
56. znf296 ENSDARG00000077897 658 1.635 - - - - - - 0.902 - 0.733 zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
57. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.633 - - - 0.804 - - - - 0.829 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
58. wu:fk48d07 wu:fk48d07 13245 1.63 0.704 - - - - - 0.926 - -
59. rhogc ENSDARG00000028401 2671 1.628 - - - 0.866 - - - 0.762 - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
60. cx35.4 ENSDARG00000042866 685 1.627 - - - - - 0.727 0.900 - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
61. sepw2a 8597 1.625 - - - - 0.732 - 0.893 - - selenoprotein W, 2a
62. cyr61 ENSDARG00000023062 1213 1.625 - - - 0.731 - - 0.894 - - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
63. gapdhs ENSDARG00000039914 8760 1.623 - 0.710 - - - - 0.913 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
64. nup188 ENSDARG00000030022 2398 1.619 - - - 0.851 - - - - 0.768 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
65. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.615 - - - 0.754 - - 0.861 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
66. csnk1db ENSDARG00000006125 2581 1.615 - - - - - 0.703 0.912 - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
67. scyl3 ENSDARG00000027046 643 1.611 - - - 0.713 - - 0.898 - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
68. dnmt3 dnmt3 1912 1.611 0.726 - - 0.885 - - - - -
69. stmn1a ENSDARG00000004169 21169 1.604 0.817 0.787 - - - - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
70. zgc:77086 ENSDARG00000014015 4908 1.601 0.707 - - - - - 0.894 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
71. eif2s3 ENSDARG00000008292 17051 1.599 - 0.727 - - - - 0.872 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
72. eif4ebp3l ENSDARG00000041607 5257 1.598 - 0.744 - - - - 0.854 - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
73. sart3 ENSDARG00000008032 2594 1.593 - - 0.771 0.822 - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
74. abcg2c ENSDARG00000058574 1261 1.593 - 0.784 - 0.809 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
75. chrac1 ENSDARG00000042337 2590 1.591 0.773 - - 0.818 - - - - - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
76. gna13b ENSDARG00000037924 1963 1.59 - - - 0.802 - 0.788 - - - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
77. itgb1a ENSDARG00000071863 4007 1.589 - 0.703 - - - - 0.886 - - integrin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-060803-2]
78. wrap53 ENSDARG00000086150 975 1.588 - - - 0.801 - 0.787 - - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
79. scaf11 ENSDARG00000045885 3531 1.586 - 0.862 - - - - - - 0.724 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
80. si:ch211-51e12.7 ENSDARG00000045914 9598 1.582 0.778 - - - - - - - 0.804 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
81. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.579 - - - 0.826 - - - - 0.753 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
82. col16a1 ENSDARG00000009194 5600 1.574 - 0.820 - - - - 0.754 - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
83. ddx39ab ENSDARG00000015111 11619 1.574 0.872 0.702 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
84. ndufb6 ENSDARG00000037259 6515 1.572 - 0.741 - - - - 0.831 - - NADH:ubiquinone oxidoreductase subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1781]
85. C8H1orf106 C8H1orf106 2690 1.564 - - - 0.834 0.730 - - - -
86. CABZ01080568.2 CABZ01080568.2 2137 1.564 - - 0.769 0.795 - - - - -
87. fkbp14 ENSDARG00000040695 7725 1.561 - 0.761 - - - - 0.800 - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
88. taldo1 ENSDARG00000103369 3804 1.559 - 0.742 - - - - 0.817 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
89. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.558 0.854 - 0.704 - - - - - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
90. prim1 ENSDARG00000040163 909 1.554 - 0.726 - 0.828 - - - - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
91. edf1 ENSDARG00000009950 10518 1.553 0.733 0.820 - - - - - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
92. tuba1b ENSDARG00000045367 8485 1.551 - 0.812 - - 0.739 - - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
93. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.544 0.774 - - - - - 0.770 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
94. cd99l2 ENSDARG00000056722 5036 1.544 0.810 - - - 0.734 - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
95. myef2 ENSDARG00000059398 6050 1.542 - 0.780 - - 0.762 - - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
96. nr2f2 ENSDARG00000040926 5213 1.54 - - - - 0.771 - - - 0.769 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
97. xpo1a ENSDARG00000078041 3544 1.539 - 0.757 - - - 0.782 - - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
98. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.535 - 0.712 - - 0.823 - - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
99. orc3 ENSDARG00000008805 444 1.534 - 0.746 - 0.788 - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
100. cox16 ENSDARG00000039136 1066 1.533 - - - 0.797 - 0.736 - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]

There are 1576 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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