Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf6

Gene Name Gene ID Reads Annotation
prpf6 ENSDARG00000091367 1868 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]










Genes with expression patterns similar to prpf6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf6 ENSDARG00000091367 1868 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
2. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 2.448 - - - 0.806 - - 0.767 - 0.875 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
3. polr2a ENSDARG00000099966 5706 2.248 - 0.718 - 0.736 - - 0.794 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
4. ptgs1 ENSDARG00000052148 2443 1.865 - - - - - 0.996 - - 0.869 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
5. nuf2 ENSDARG00000034624 2252 1.838 - - - - - 0.997 - - 0.841 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
6. fam3c ENSDARG00000056152 3833 1.825 - - - - - 0.997 - - 0.828 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
7. chst11 ENSDARG00000034375 2701 1.817 - - - - - 0.996 - - 0.821 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
8. GRK6 ENSDARG00000032157 1136 1.806 - 0.808 - - - 0.998 - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
9. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.788 - - - 0.871 - - - - 0.917 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
10. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.775 - 0.853 - - - - - - 0.922 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
11. sart3 ENSDARG00000008032 2594 1.772 - - - - - 0.998 - - 0.774 squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
12. si:ch211-286b5.5 ENSDARG00000096661 3136 1.768 - - - - - 0.994 - - 0.774 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
13. Mar-02 Mar-02 1812 1.759 - - - - - - 0.841 - 0.918
14. zcchc7 ENSDARG00000055443 2159 1.759 - 0.760 - - - 0.999 - - - zinc finger, CCHC domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030102-2]
15. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.756 - - - - - 0.993 - - 0.763 threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
16. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.751 - - - 0.849 - - - - 0.902 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
17. emc8 ENSDARG00000017093 1947 1.746 - 0.750 - - - 0.996 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
18. PLCXD1_4 PLCXD1_4 3673 1.736 - 0.751 - - - 0.985 - - -
19. gapdhs ENSDARG00000039914 8760 1.735 - - - 0.809 - 0.926 - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
20. mov10b.1 ENSDARG00000061177 370 1.731 - - - 0.847 - - - - 0.884 Moloney leukemia virus 10b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9089]
21. nrg1 ENSDARG00000104314 1081 1.726 - - - 0.827 - - - - 0.899 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
22. c5 ENSDARG00000021004 3536 1.725 - 0.815 - - - 0.910 - - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
23. mcm7 ENSDARG00000101180 12417 1.71 - 0.714 - - - 0.996 - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
24. casp2 ENSDARG00000062052 559 1.709 - - - - - - 0.796 - 0.913 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
25. serpinf2b ENSDARG00000061383 3859 1.704 - 0.774 - - - 0.930 - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
26. prmt10 prmt10 312 1.704 - - - - - - 0.799 - 0.905
27. aatka ENSDARG00000078222 218 1.703 - - - 0.869 - - 0.834 - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
28. imp4 ENSDARG00000054540 1396 1.701 - - - - - - 0.758 - 0.943 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
29. gk5 ENSDARG00000062864 738 1.693 - - - - - - 0.827 - 0.866 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
30. paf1 ENSDARG00000098432 1806 1.686 - - - - - - - 0.786 0.900 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
31. frmd8 ENSDARG00000073696 2661 1.685 - - - - - 0.972 0.713 - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
32. ralgps2 ENSDARG00000026519 1610 1.68 - - - - - - 0.795 - 0.885 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
33. TPMT TPMT 138 1.676 - - - - - - 0.778 - 0.898
34. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.675 - - - 0.777 - - - - 0.898 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
35. fkbp4 ENSDARG00000008447 3736 1.671 - 0.786 - - - - - - 0.885 FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
36. eif4enif1 ENSDARG00000016177 238 1.653 - - - 0.874 - - 0.779 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
37. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.651 - - - 0.748 - - - - 0.903 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
38. psd3l ENSDARG00000104820 1201 1.651 - - - 0.736 - - - - 0.915 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
39. si:ch73-91k6.2 ENSDARG00000091598 727 1.645 - - - - - - 0.763 - 0.882 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
40. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.644 - - - 0.782 - - - - 0.862 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
41. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.64 - - - - - - - 0.794 0.846 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
42. aebp1 ENSDARG00000091726 906 1.638 - - - - - - 0.719 - 0.919 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
43. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.637 - - - - - - 0.707 - 0.930 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
44. atrip ENSDARG00000063076 385 1.636 - - - - - - 0.736 - 0.900 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
45. dus3l ENSDARG00000099528 1192 1.635 - - - 0.736 - - - - 0.899 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
46. C21H5orf15 C21H5orf15 2318 1.631 - - - - - - 0.857 - 0.774
47. plch1 ENSDARG00000079253 1216 1.626 - - 0.702 - - - - - 0.924 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
48. FUZ ENSDARG00000079730 821 1.623 - - - - - - 0.727 - 0.896 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
49. adrbk2 1037 1.622 - 0.779 - - - - - - 0.843 adrenergic, beta, receptor kinase 2, transcript variant X1
50. dars2 ENSDARG00000060861 137 1.612 - - - 0.861 - - 0.751 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
51. tmem238 tmem238 1403 1.611 - 0.812 - - - - 0.799 - -
52. ift57 ENSDARG00000021022 288 1.61 - - - 0.886 - - 0.724 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
53. b3gnt5a ENSDARG00000018971 938 1.604 - - - - - - 0.773 - 0.831 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
54. pgls ENSDARG00000021233 264 1.601 - - - 0.822 - - 0.779 - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
55. phip ENSDARG00000015970 1080 1.6 - - - 0.785 - - 0.815 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
56. grhl3 ENSDARG00000078552 897 1.593 - - - - - - 0.737 - 0.856 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
57. pparaa ENSDARG00000031777 216 1.576 - - - 0.839 - - 0.737 - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
58. klhl11 ENSDARG00000045130 800 1.569 - - - 0.756 - - 0.813 - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
59. EMILIN3 1347 1.564 - 0.727 - - - - - - 0.837 elastin microfibril interfacer 3
60. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.563 - - - - - - 0.705 - 0.858 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
61. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 1.562 - - - 0.722 - - 0.840 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
62. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.557 - - - - - - 0.723 - 0.834 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
63. dkc1 ENSDARG00000016484 7088 1.552 - - - - - - 0.840 - 0.712 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
64. C20H6orf211 C20H6orf211 529 1.546 - - - 0.840 - - 0.706 - -
65. zgc:77391 zgc:77391 1445 1.544 - - - 0.750 - - - - 0.794
66. smu1 smu1 982 1.54 - 0.798 - - - - 0.742 - -
67. SGTA ENSDARG00000019941 2959 1.537 - 0.742 - - - - - - 0.795 small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
68. polr2j ENSDARG00000035146 1493 1.532 - - - - - - 0.778 0.754 - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
69. ctnnbl1 ENSDARG00000011958 2276 1.53 - 0.723 - - - - - - 0.807 catenin, beta like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1850]
70. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.522 0.708 - - - - - - - 0.814 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
71. IKZF2 ENSDARG00000069111 1366 1.512 - - - - - - 0.705 - 0.807 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
72. padi2 ENSDARG00000044167 6765 1.503 - - - 0.766 - - 0.737 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
73. sall4 ENSDARG00000044485 1694 1.503 - - - - - - 0.725 - 0.778 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
74. XPR1 XPR1 3354 1.499 - 0.740 - 0.759 - - - - -
75. u2af2a ENSDARG00000012505 2920 1.498 - - - - - - 0.712 - 0.786 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
76. ost4 ENSDARG00000096118 7679 1.496 - 0.710 - - - - 0.786 - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
77. mfn2 ENSDARG00000079504 726 1.494 - - - 0.756 - - 0.738 - - mitofusin 2 [Source:ZFIN;Acc:ZDB-GENE-081105-44]
78. pdxdc1 ENSDARG00000101886 1958 1.489 - 0.755 - - - - - - 0.734 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
79. timp2b ENSDARG00000075261 867 1.487 - - - - - - 0.709 - 0.778 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
80. tfap2c ENSDARG00000040606 4628 1.479 - 0.770 - - - - 0.709 - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
81. SENP2 ENSDARG00000073837 1411 1.478 - - 0.757 0.721 - - - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
82. bag6l ENSDARG00000077531 1027 1.464 - 0.726 - - - - 0.738 - - BCL2 associated athanogene 6, like [Source:ZFIN;Acc:ZDB-GENE-060307-2]
83. sult6b1 ENSDARG00000086826 2070 1.462 - - - - - - 0.705 - 0.757 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
84. rcor1 ENSDARG00000031434 2733 1.461 - - - 0.730 - - 0.731 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
85. CABZ01043370.1 CABZ01043370.1 2013 1.456 - - - 0.723 - - 0.733 - -
86. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.448 - - - - - - 0.727 - 0.721 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
87. PLEKHH3 ENSDARG00000070174 2117 1.445 - - - 0.727 - - - - 0.718 pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
88. ncoa4 ENSDARG00000021439 4581 1.442 - 0.737 - - - - 0.705 - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
89. nedd8 ENSDARG00000007989 3896 1.433 0.713 0.720 - - - - - - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
90. ostm1 ENSDARG00000069808 1024 1.424 - 0.719 - - - - 0.705 - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
91. olfml2bb ENSDARG00000021480 256 0.999 - - - - - 0.999 - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
92. mef2cb ENSDARG00000009418 1124 0.999 - - - - - 0.999 - - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
93. ldlrad3 ENSDARG00000078600 926 0.999 - - - - - 0.999 - - - low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
94. pir ENSDARG00000056638 722 0.999 - - - - - 0.999 - - - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
95. FRG1 ENSDARG00000056504 1196 0.999 - - - - - 0.999 - - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
96. ARHGAP35 2409 0.998 - - - - - 0.998 - - - Rho GTPase activating protein 35b, transcript variant X2
97. SPIN4_1 SPIN4_1 2562 0.998 - - - - - 0.998 - - -
98. timm10b ENSDARG00000043898 1233 0.998 - - - - - 0.998 - - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
99. ctdspla ENSDARG00000071673 1447 0.998 - - - - - 0.998 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
100. gopc ENSDARG00000023117 1206 0.998 - - - - - 0.998 - - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]

There are 1522 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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