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Results for prpf4ba

Gene Name Gene ID Reads Annotation
prpf4ba ENSDARG00000008784 936 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]










Genes with expression patterns similar to prpf4ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf4ba ENSDARG00000008784 936 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
2. cwc25 ENSDARG00000003382 2134 1.829 - - 0.956 - - - - - 0.873 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
3. ppp1r14c ENSDARG00000077341 1587 1.827 - - 0.981 - - - - - 0.846 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
4. smpd1 ENSDARG00000076121 584 1.824 - 0.838 0.986 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
5. txnl4a ENSDARG00000036190 2048 1.82 - - 0.956 - - - - - 0.864 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
6. hdac4 ENSDARG00000098349 1370 1.82 - - 0.978 - - - - - 0.842 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
7. itsn1 ENSDARG00000000086 684 1.804 - 0.817 0.987 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
8. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.752 - 0.784 0.968 - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
9. zgc:56585 ENSDARG00000026236 704 1.752 - 0.779 0.973 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
10. mark2a ENSDARG00000079905 1765 1.746 - 0.760 0.986 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
11. cables2a ENSDARG00000076964 1330 1.72 - 0.846 - - - - - - 0.874 Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
12. ostf1 ENSDARG00000091555, ENSDARG00000114550 582 1.712 - 0.817 - - - - - - 0.895 osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
13. EMG1 ENSDARG00000056914 1343 1.711 - - 0.960 - - 0.751 - - - EMG1 N1-specific pseudouridine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060421-2909]
14. C21H18orf25 C21H18orf25 800 1.696 - 0.787 - - - - - - 0.909
15. ndst2b ENSDARG00000060678 453 1.694 - - - - - 0.771 - - 0.923 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
16. arid4a ENSDARG00000043873 4176 1.686 - - 0.955 - - - - - 0.731 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
17. papss1 ENSDARG00000057099 809 1.683 - - - - - - - 0.753 0.930 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
18. zgc:113348 ENSDARG00000103795 1351 1.68 - - - - - - - 0.758 0.922 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
19. rbm45 ENSDARG00000063731 504 1.679 - 0.771 - - - - - - 0.908 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
20. brms1lb ENSDARG00000018047 453 1.666 - - - - - 0.769 - - 0.897 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
21. SNAP91 ENSDARG00000098809 556 1.663 - - - - - - - 0.746 0.917 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
22. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.66 - - - - - 0.741 - - 0.919 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
23. ror1 ENSDARG00000015176 378 1.65 - - - - - - 0.742 - 0.908 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
24. st8sia5 ENSDARG00000036584 529 1.646 - - - - - - - 0.728 0.918 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
25. hic1l ENSDARG00000045660 1489 1.645 - - - - - - - 0.710 0.935 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
26. pou4f2 ENSDARG00000069737 451 1.642 - - - - - - - 0.779 0.863 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
27. FBXL3 FBXL3 1769 1.64 - 0.746 - - - - - - 0.894
28. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.637 - 0.774 - - - - - - 0.863 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
29. zgc:173548 ENSDARG00000070048 558 1.637 - 0.734 - - - - - - 0.903 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
30. caly ENSDARG00000036008 1002 1.631 - 0.723 - - - - - - 0.908 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
31. col12a1a ENSDARG00000078322 1833 1.628 - 0.844 - - - - - - 0.784 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
32. prdx4 ENSDARG00000069013 1150 1.628 - 0.780 - - - - - - 0.848 peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
33. kif18a ENSDARG00000008022 546 1.616 - - - - - - - 0.735 0.881 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
34. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 1.614 - - - - - - - 0.726 0.888 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
35. RFFL_1 RFFL_1 157 1.613 - - - - - 0.714 - - 0.899
36. TMEM55B_1 TMEM55B_1 495 1.602 - - - - - 0.785 - 0.817 -
37. rgs17 ENSDARG00000039435 590 1.6 - - - - - 0.881 - 0.719 - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
38. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.597 - - - - - - 0.736 - 0.861 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
39. sdad1 ENSDARG00000105117 2819 1.594 - - - - - - 0.707 - 0.887 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
40. SPIN4_1 SPIN4_1 2562 1.593 - - - - - - - 0.730 0.863
41. ssh2a ENSDARG00000088440 1149 1.592 - 0.733 - - - - - - 0.859 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
42. gad2 ENSDARG00000015537 724 1.586 - - - - - - - 0.725 0.861 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
43. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 1.576 0.787 - - - - - - 0.789 - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
44. dcps ENSDARG00000009862 571 1.576 - 0.785 - - - - - 0.791 - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
45. prr12a ENSDARG00000074229 1668 1.573 - - - - - 0.734 - - 0.839 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
46. TNRC6B ENSDARG00000074161 2464 1.572 - 0.707 - - - - - - 0.865 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
47. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.569 - - - - - 0.746 - - 0.823 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
48. uhrf1bp1l ENSDARG00000004055 419 1.568 - 0.822 - - - - 0.746 - - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
49. palm1b ENSDARG00000007818 2128 1.564 - 0.767 - - - - - - 0.797 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
50. srfbp1 ENSDARG00000075323 2262 1.559 - 0.823 - - - - - 0.736 - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
51. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.555 - - - - - - - 0.834 0.721 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
52. cops4 ENSDARG00000043732 1508 1.553 - 0.807 - - - - 0.746 - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
53. fryb ENSDARG00000056001, ENSDARG00000110169 307 1.553 - 0.793 - - - 0.760 - - - furry homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080215-5]
54. FRG1 ENSDARG00000056504 1196 1.552 - - - - - - - 0.707 0.845 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
55. sfmbt2 ENSDARG00000045519 251 1.539 - 0.821 - - - - 0.718 - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
56. mapk8ip2 ENSDARG00000063157 467 1.538 0.724 - - - - - - 0.814 - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
57. RANBP3 RANBP3 2513 1.533 - 0.783 - - - - - - 0.750
58. vps52 ENSDARG00000099258 780 1.532 - 0.806 - - - 0.726 - - - vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-010430-2]
59. MIS12 ENSDARG00000026454 649 1.461 - - - - - - 0.710 0.751 - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
60. nhp2l1a nhp2l1a 993 1.458 - 0.729 - - - - - 0.729 -
61. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.452 - - - 0.705 - - - 0.747 - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
62. fam219ab ENSDARG00000013813 591 1.424 0.702 - - - - - - 0.722 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
63. tmem231 ENSDARG00000042272 557 1.418 - 0.703 - - - - - 0.715 - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
64. slbp ENSDARG00000100558 3405 1.404 - - - - - - - 0.703 0.701 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
65. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.991 - - 0.991 - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
66. npdc1 npdc1 221 0.989 - - 0.989 - - - - - -
67. clic1 ENSDARG00000103340 2235 0.989 - - 0.989 - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
68. ZNHIT6 ENSDARG00000095817 355 0.988 - - 0.988 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
69. edc3 ENSDARG00000051931 780 0.988 - - 0.988 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
70. abcg2c ENSDARG00000058574 1261 0.987 - - 0.987 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
71. si:ch211-250c4.3 si:ch211-250c4.3 677 0.987 - - 0.987 - - - - - -
72. ndufa4l2 153 0.985 - - 0.985 - - - - - - NDUFA4, mitochondrial complex associated like 2
73. si:ch211-173m16.2 ENSDARG00000093284 186 0.985 - - 0.985 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
74. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.985 - - 0.985 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
75. CR855996.2 ENSDARG00000104450 310 0.985 - - 0.985 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
76. hipk3b ENSDARG00000062082 1248 0.985 - - 0.985 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
77. ralba ENSDARG00000040778 1574 0.985 - - 0.985 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
78. tbc1d10a tbc1d10a 462 0.985 - - 0.985 - - - - - -
79. c1ql3a ENSDARG00000010350 179 0.985 - - 0.985 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
80. CR382281.1 ENSDARG00000100098 135 0.985 - - 0.985 - - - - - -
81. sptlc3 ENSDARG00000030743 596 0.985 - - 0.985 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
82. si:dkey-54g2.6 si:dkey-54g2.6 252 0.985 - - 0.985 - - - - - -
83. wnt10a ENSDARG00000017155 491 0.985 - - 0.985 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
84. si:dkey-220k22.3 ENSDARG00000094693 166 0.985 - - 0.985 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
85. CABZ01008011.1 CABZ01008011.1 761 0.984 - - 0.984 - - - - - -
86. gnb1a ENSDARG00000090454 481 0.984 - - 0.984 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
87. dctn3 ENSDARG00000041363 3351 0.984 - - 0.984 - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
88. mxra8b ENSDARG00000062129 1004 0.984 - - 0.984 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
89. mbtps2 ENSDARG00000057577 1285 0.984 - - 0.984 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
90. galnt1 ENSDARG00000061335 1648 0.983 - - 0.983 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
91. prdm1a ENSDARG00000002445 1340 0.983 - - 0.983 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
92. tmco4 ENSDARG00000078924 330 0.983 - - 0.983 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
93. phgdh ENSDARG00000001873 8325 0.982 - - 0.982 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
94. yeats4 ENSDARG00000045874 1168 0.982 - - 0.982 - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
95. hint3 ENSDARG00000074286 1015 0.982 - - 0.982 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
96. sema3fb ENSDARG00000055373 834 0.982 - - 0.982 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
97. PTDSS2 ENSDARG00000101018 881 0.981 - - 0.981 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
98. slc2a10 ENSDARG00000090820 637 0.981 - - 0.981 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
99. stk38a ENSDARG00000019973 1343 0.981 - - 0.981 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
100. dnajc3 dnajc3 802 0.981 - - 0.981 - - - - - -

There are 1490 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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