Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf4_1

Gene Name Gene ID Reads Annotation
prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]










Genes with expression patterns similar to prpf4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 3 1.000 - - 1.000 - - - 1.000 - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
2. ddx46 ENSDARG00000099458 24 1.683 0.930 - - - - - - 0.753 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
3. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
4. BX927369.3 BX927369.3 5 1 - - - - - - - 1.000 -
5. CU467642.1 CU467642.1 8 1 - - - - - - - 1.000 -
6. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
7. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
8. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
9. dnm3 dnm3 45 1 1.000 - - - - - - - -
10. irgf3 ENSDARG00000062820 20 1 - - - 1.000 - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
11. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
12. FGD5_1 FGD5_1 8 1 - - - 1.000 - - - - -
13. zgc:173652 22 1 - - - - - - - 1.000 - zgc:173652
14. myo7bb ENSDARG00000077201 7 1 - - - - - - - 1.000 - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
15. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
16. AL929220.1 ENSDARG00000103323 14 1 - - - 1.000 - - - - -
17. TOR4A TOR4A 70 1 1.000 - - - - - - - -
18. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
19. SNORA62 SNORA62 39 1 1.000 - - - - - - - -
20. zgc:174680 ENSDARG00000100702 3 1 - - - 1.000 - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
21. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1 - - - - - - - 1.000 - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
22. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
23. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
24. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
25. cenpv ENSDARG00000092285 10 1 - - - 1.000 - - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
26. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
27. si:dkey-42i9.8 ENSDARG00000071541 17 1 - - - - - - - 1.000 - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
28. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
29. HRASLS ENSDARG00000100021 16 1 - - - 1.000 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
30. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - - 1.000 - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
31. CR381673.3 CR381673.3 4 1 - - - 1.000 - - - - -
32. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
33. CR388163.1 ENSDARG00000096928 5 1 - - - 1.000 - - - - -
34. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
35. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
36. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
37. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
38. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - 1.000 - si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
39. SNORA23 SNORA23 1 1 - - - 1.000 - - - - -
40. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
41. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
42. bco2a ENSDARG00000055722 1 1 - - - - - - - 1.000 - beta-carotene oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8039]
43. zgc:198329 ENSDARG00000076981, ENSDARG00000115877 124 1 - - - 1.000 - - - - - zgc:198329 [Source:ZFIN;Acc:ZDB-GENE-080226-6]
44. si:dkey-145c18.4 ENSDARG00000095263 2 1 - - - - - - - 1.000 - si:dkey-145c18.4 [Source:ZFIN;Acc:ZDB-GENE-081104-309]
45. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
46. wu:fb63c12 26 1 - - - 1.000 - - - - - wu:fb63c12
47. SLC2A11 SLC2A11 5 1 - - - 1.000 - - - - -
48. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
49. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
50. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
51. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
52. SLC15A5 ENSDARG00000089974 18 1 - - - 1.000 - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
53. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
54. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - 1.000 - - - - -
55. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
56. SLC26A3 SLC26A3 8 1 - - - 1.000 - - - - -
57. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
58. mxe ENSDARG00000014427 6 1 - - - 1.000 - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
59. kif13bb ENSDARG00000073859 7 1 - - - 1.000 - - - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
60. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
61. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
62. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
63. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
64. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - 1.000 - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
65. CR753817.1 ENSDARG00000110927 26 1 - - - - - - - 1.000 -
66. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
67. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
68. SPP2 ENSDARG00000095590 5 1 - - - - - - - 1.000 - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
69. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
70. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
71. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
72. rnf213a ENSDARG00000099465 2 1 - - - - - - - 1.000 - ring finger protein 213a [Source:ZFIN;Acc:ZDB-GENE-050302-100]
73. DNHD1 DNHD1 4 1 - - - - - - - 1.000 -
74. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
75. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
76. CABZ01081656.1 CABZ01081656.1 14 1 - - - - - - - 1.000 -
77. tmem8c 10 1 - - - 1.000 - - - - - transmembrane protein 8C, transcript variant X1
78. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
79. WIPI1 ENSDARG00000040657 138 1 - - - 1.000 - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
80. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
81. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
82. kif17 ENSDARG00000055238 12 1 - - - - - - - 1.000 - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
83. ponzr10 ENSDARG00000087764 3 1 - - - - - - - 1.000 - plac8 onzin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-081107-68]
84. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
85. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
86. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
87. ZNF337 ZNF337 3 1 - - - - - - - 1.000 -
88. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
89. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
90. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
91. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
92. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
93. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
94. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
95. zgc:136605 ENSDARG00000042972 2 1 - - - 1.000 - - - - - zgc:136605 [Source:ZFIN;Acc:ZDB-GENE-060312-11]
96. fnbp1 fnbp1 5 1 - - - 1.000 - - - - -
97. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
98. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
99. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
100. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -

There are 399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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