Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf4_1

Gene Name Gene ID Reads Annotation
prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]










Genes with expression patterns similar to prpf4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 3 1.000 - - 1.000 - - - 1.000 - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
2. ddx46 ENSDARG00000099458 24 1.683 0.930 - - - - - - 0.753 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
3. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
4. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - - 1.000 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
5. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
6. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
7. SNORA23 SNORA23 1 1 - - - 1.000 - - - - -
8. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
9. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
10. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
11. si:dkey-241l7.5 ENSDARG00000088989 6 1 1.000 - - - - - - - - si:dkey-241l7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-237]
12. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
13. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
14. SPAG17 SPAG17 31 1 - - - 1.000 - - - - -
15. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1 - - - - - - - 1.000 - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
16. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
17. rnf213a ENSDARG00000099465 2 1 - - - - - - - 1.000 - ring finger protein 213a [Source:ZFIN;Acc:ZDB-GENE-050302-100]
18. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
19. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
20. mlxip ENSDARG00000059474 12 1 - - - 1.000 - - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
21. ME1 ENSDARG00000053215 8 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
22. dnm3 dnm3 45 1 1.000 - - - - - - - -
23. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
24. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
25. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
26. nanog ENSDARG00000075113 10 1 - - - 1.000 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
27. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
28. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
29. SNORA62 SNORA62 39 1 1.000 - - - - - - - -
30. cenpv ENSDARG00000092285 10 1 - - - 1.000 - - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
31. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
32. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
33. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
34. CABZ01081656.1 CABZ01081656.1 14 1 - - - - - - - 1.000 -
35. fnbp1 fnbp1 5 1 - - - 1.000 - - - - -
36. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
37. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
38. heatr5a_1 ENSDARG00000023999 2 1 - - - - - - - 1.000 - HEAT repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030616-152]
39. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - - - - - - - 1.000 -
40. myo7bb ENSDARG00000077201 7 1 - - - - - - - 1.000 - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
41. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
42. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - 1.000 - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
43. eif2b5 ENSDARG00000074995 8 1 - - - 1.000 - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
44. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
45. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
46. FGD5_1 FGD5_1 8 1 - - - 1.000 - - - - -
47. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
48. ASPG_1 ASPG_1 2 1 - - - - - - - 1.000 -
49. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
50. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
51. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
52. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
53. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
54. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
55. tmem8c 10 1 - - - 1.000 - - - - - transmembrane protein 8C, transcript variant X1
56. CR753817.1 ENSDARG00000110927 26 1 - - - - - - - 1.000 -
57. DNHD1 DNHD1 4 1 - - - - - - - 1.000 -
58. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
59. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
60. CR381673.3 CR381673.3 4 1 - - - 1.000 - - - - -
61. zbtb25 ENSDARG00000042383 94 1 1.000 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
62. HBQ1 HBQ1 413 1 1.000 - - - - - - - -
63. bco2a ENSDARG00000055722 1 1 - - - - - - - 1.000 - beta-carotene oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8039]
64. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
65. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 - - - 1.000 - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
66. mxe ENSDARG00000014427 6 1 - - - 1.000 - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
67. SLC15A5 ENSDARG00000089974 18 1 - - - 1.000 - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
68. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
69. ZNF337 ZNF337 3 1 - - - - - - - 1.000 -
70. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
71. CMA1_1 CMA1_1 7 1 - - - - - - - 1.000 -
72. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
73. or137-1 ENSDARG00000105789 2 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
74. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
75. SPP2 ENSDARG00000095590 5 1 - - - - - - - 1.000 - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
76. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
77. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - - 1.000 - - - - -
78. BX927369.3 BX927369.3 5 1 - - - - - - - 1.000 -
79. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
80. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
81. fgf14 ENSDARG00000040982 5 1 - - - 1.000 - - - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
82. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
83. zgc:172139 ENSDARG00000068830 10 1 - - - 1.000 - - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
84. zgc:136605 ENSDARG00000042972 2 1 - - - 1.000 - - - - - zgc:136605 [Source:ZFIN;Acc:ZDB-GENE-060312-11]
85. HRASLS ENSDARG00000100021 16 1 - - - 1.000 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
86. dock1 ENSDARG00000099093 10 1 1.000 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
87. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
88. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - 1.000 - - - - -
89. zgc:174680 ENSDARG00000100702 3 1 - - - 1.000 - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
90. sytl5 ENSDARG00000062135 11 1 - - - 1.000 - - - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
91. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
92. si:dkey-145c18.4 ENSDARG00000095263 2 1 - - - - - - - 1.000 - si:dkey-145c18.4 [Source:ZFIN;Acc:ZDB-GENE-081104-309]
93. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
94. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
95. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
96. si:ch73-346o4.2 si:ch73-346o4.2 1 1 - - - 1.000 - - - - -
97. WIPI1 ENSDARG00000040657 138 1 - - - 1.000 - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
98. CU467642.1 CU467642.1 8 1 - - - - - - - 1.000 -
99. CR388163.1 ENSDARG00000096928 5 1 - - - 1.000 - - - - -
100. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]

There are 399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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