Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf4_1

Gene Name Gene ID Reads Annotation
prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]










Genes with expression patterns similar to prpf4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 3 1.000 - - 1.000 - - - 1.000 - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
2. ddx46 ENSDARG00000099458 24 1.683 0.930 - - - - - - 0.753 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
3. mxe ENSDARG00000014427 6 1 - - - 1.000 - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
4. si:dkey-16n15.6 ENSDARG00000095805 18 1 1.000 - - - - - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
5. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - 1.000 - - - - -
6. SLC26A3 SLC26A3 8 1 - - - 1.000 - - - - -
7. SMCHD1 ENSDARG00000104374 2 1 1.000 - - - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
8. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
9. SLC15A5 ENSDARG00000089974 18 1 - - - 1.000 - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
10. BX571880.1 ENSDARG00000097533 499 1 1.000 - - - - - - - -
11. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
12. HIST1H2BA_1 ENSDARG00000116654 37 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
13. nrros ENSDARG00000071491, ENSDARG00000112102 64 1 1.000 - - - - - - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
14. wu:fb63c12 26 1 - - - 1.000 - - - - - wu:fb63c12
15. SLC2A11 SLC2A11 5 1 - - - 1.000 - - - - -
16. si:dkey-145c18.4 ENSDARG00000095263 2 1 - - - - - - - 1.000 - si:dkey-145c18.4 [Source:ZFIN;Acc:ZDB-GENE-081104-309]
17. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
18. bco2a ENSDARG00000055722 1 1 - - - - - - - 1.000 - beta-carotene oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8039]
19. zgc:198329 ENSDARG00000076981, ENSDARG00000115877 124 1 - - - 1.000 - - - - - zgc:198329 [Source:ZFIN;Acc:ZDB-GENE-080226-6]
20. epm2a ENSDARG00000059044 10 1 1.000 - - - - - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
21. SNORA23 SNORA23 1 1 - - - 1.000 - - - - -
22. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
23. kif17 ENSDARG00000055238 12 1 - - - - - - - 1.000 - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
24. CABZ01081656.1 CABZ01081656.1 14 1 - - - - - - - 1.000 -
25. tmem8c 10 1 - - - 1.000 - - - - - transmembrane protein 8C, transcript variant X1
26. FP102192.1 ENSDARG00000101104 32 1 1.000 - - - - - - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
27. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
28. FP085392.1 FP085392.1 12 1 1.000 - - - - - - - -
29. WIPI1 ENSDARG00000040657 138 1 - - - 1.000 - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
30. si:dkey-58b18.10 ENSDARG00000109911, ENSDARG00000113007, ENSDARG00000116868 4 1 1.000 - - - - - - - - si:dkey-58b18.10 [Source:ZFIN;Acc:ZDB-GENE-070912-560]
31. snrnp35 ENSDARG00000099913 21 1 1.000 - - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
32. gpr39 ENSDARG00000102888 46 1 1.000 - - - - - - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
33. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 1.000 - - - - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
34. rnf213a ENSDARG00000099465 2 1 - - - - - - - 1.000 - ring finger protein 213a [Source:ZFIN;Acc:ZDB-GENE-050302-100]
35. DNHD1 DNHD1 4 1 - - - - - - - 1.000 -
36. SPP2 ENSDARG00000095590 5 1 - - - - - - - 1.000 - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
37. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
38. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
39. si:ch211-73m21.2 si:ch211-73m21.2 5 1 1.000 - - - - - - - -
40. CR753817.1 ENSDARG00000110927 26 1 - - - - - - - 1.000 -
41. si:ch211-106g4.2 si:ch211-106g4.2 6 1 1.000 - - - - - - - -
42. CABZ01080224.1 CABZ01080224.1 1 1 1.000 - - - - - - - -
43. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - 1.000 - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
44. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
45. kif13bb ENSDARG00000073859 7 1 - - - 1.000 - - - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
46. CU896555.1 CU896555.1 27 1 1.000 - - - - - - - -
47. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
48. TOR4A TOR4A 70 1 1.000 - - - - - - - -
49. fermt3b ENSDARG00000030938 17 1 1.000 - - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
50. myo7bb ENSDARG00000077201 7 1 - - - - - - - 1.000 - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
51. AL929220.1 ENSDARG00000103323 14 1 - - - 1.000 - - - - -
52. FGD5_1 FGD5_1 8 1 - - - 1.000 - - - - -
53. zgc:173652 22 1 - - - - - - - 1.000 - zgc:173652
54. dnm3 dnm3 45 1 1.000 - - - - - - - -
55. irgf3 ENSDARG00000062820 20 1 - - - 1.000 - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
56. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
57. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
58. ENSDARG00000091766 ENSDARG00000091766 15 1 1.000 - - - - - - - -
59. si:ch211-255g12.8 ENSDARG00000069627 22 1 1.000 - - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
60. CU467642.1 CU467642.1 8 1 - - - - - - - 1.000 -
61. BX927369.3 BX927369.3 5 1 - - - - - - - 1.000 -
62. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
63. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
64. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
65. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - 1.000 - si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
66. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - - 1.000 - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
67. CR381673.3 CR381673.3 4 1 - - - 1.000 - - - - -
68. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 1.000 - - - - - - - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
69. cdkn1bb_1 ENSDARG00000054271 5 1 1.000 - - - - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
70. CR388163.1 ENSDARG00000096928 5 1 - - - 1.000 - - - - -
71. lcn15 ENSDARG00000067851 140 1 1.000 - - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
72. znf142 ENSDARG00000061373 47 1 1.000 - - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
73. fgf10b ENSDARG00000100475 17 1 1.000 - - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
74. HRASLS ENSDARG00000100021 16 1 - - - 1.000 - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
75. si:dkey-42i9.8 ENSDARG00000071541 17 1 - - - - - - - 1.000 - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
76. cenpv ENSDARG00000092285 10 1 - - - 1.000 - - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
77. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
78. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1 - - - - - - - 1.000 - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
79. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
80. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
81. SNORA62 SNORA62 39 1 1.000 - - - - - - - -
82. zgc:174680 ENSDARG00000100702 3 1 - - - 1.000 - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
83. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - - - 1.000 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
84. CABZ01064228.1 CABZ01064228.1 1 1 - - - 1.000 - - - - -
85. thap7 ENSDARG00000070704 225 1 1.000 - - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
86. sytl5 ENSDARG00000062135 11 1 - - - 1.000 - - - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
87. zbtb25 ENSDARG00000042383 94 1 1.000 - - - - - - - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
88. nanog ENSDARG00000075113 10 1 - - - 1.000 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
89. impact ENSDARG00000043288 7 1 - - - 1.000 - - - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
90. SLC28A2 SLC28A2 21 1 1.000 - - - - - - - -
91. CABZ01052953.1 CABZ01052953.1 146 1 - - - 1.000 - - - - -
92. heatr5a_1 ENSDARG00000023999 2 1 - - - - - - - 1.000 - HEAT repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030616-152]
93. mlxip ENSDARG00000059474 12 1 - - - 1.000 - - - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
94. HBQ1 HBQ1 413 1 1.000 - - - - - - - -
95. ME1 ENSDARG00000053215 8 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
96. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
97. MUC5AC_1 MUC5AC_1 381 1 1.000 - - - - - - - -
98. PAK6 PAK6 5 1 - - - - - - - 1.000 -
99. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
100. mpx ENSDARG00000019521 562 1 1.000 - - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]

There are 399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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