Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf4

Gene Name Gene ID Reads Annotation
prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]










Genes with expression patterns similar to prpf4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 5 1.000 - 1.000 1.000 1.000 - - 1.000 - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
2. si:ch211-151h10.2 ENSDARG00000068250 14 1.742 - - - 1.000 0.742 - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
3. si:dkey-20j10.2 si:dkey-20j10.2 8 1.735 - - - - 0.879 - - 0.856 -
4. si:ch73-60p2.1 si:ch73-60p2.1 21 1.706 - - - - 0.850 - - 0.856 -
5. TRIOBP TRIOBP 92 1.623 0.819 - - - 0.804 - - - -
6. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
7. zgc:114037_4 57 1 1.000 - - - - - - - - zgc:114037
8. taar16a ENSDARG00000054237 1 1 1.000 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
9. GALNT9 ENSDARG00000006832 120 1 1.000 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
10. lsm10 5 1 - - - 1.000 - - - - - LSM10, U7 small nuclear RNA associated
11. CR391962.1 CR391962.1 31 1 1.000 - - - - - - - -
12. gpr12 ENSDARG00000062934 7 1 1.000 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
13. si:ch211-234p6.9 ENSDARG00000095730 3 1 - - - - 1.000 - - - - si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33]
14. WDPCP ENSDARG00000074590 35 1 1.000 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
15. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
16. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1 - - - - 1.000 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
17. TRIM46 TRIM46 73 1 1.000 - - - - - - - -
18. six6a ENSDARG00000025187 40 1 1.000 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
19. rargb ENSDARG00000054003 7 1 - - - - 1.000 - - - - retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
20. plac8.2 ENSDARG00000094438 3 1 - - - - 1.000 - - - - placenta-specific 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]
21. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
22. si:ch211-222k6.2 ENSDARG00000087046 144 1 1.000 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
23. si:ch211-167j6.3 ENSDARG00000095504 5 1 1.000 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
24. cpne5 cpne5 16 1 1.000 - - - - - - - -
25. tyro3 ENSDARG00000005356 4 1 - - - 1.000 - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
26. si:dkey-14d8.19 si:dkey-14d8.19 12 1 1.000 - - - - - - - -
27. b3gnt7 ENSDARG00000038489 29 1 - - - - 1.000 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
28. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 1.000 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
29. fam73b 76 1 1.000 - - - - - - - - family with sequence similarity 73, member B
30. TMEM100_1 TMEM100_1 44 1 1.000 - - - - - - - -
31. CNTNAP1 ENSDARG00000074524 73 1 1.000 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
32. si:ch211-122l24.2 si:ch211-122l24.2 1 1 1.000 - - - - - - - -
33. zgc:112965 ENSDARG00000007787 5 1 1.000 - - - - - - - - zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
34. BX897747.1 ENSDARG00000117746 11 1 1.000 - - - - - - - -
35. si:dkeyp-67a8.4 ENSDARG00000090099, ENSDARG00000092823 1 1 1.000 - - - - - - - - si:dkeyp-67a8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-666]
36. GPC5 GPC5 11 1 - - - 1.000 - - - - -
37. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 1.000 - - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
38. BX571823.5 BX571823.5 4 1 - - - 1.000 - - - - -
39. aspscr1_1 ENSDARG00000105321 4 1 1.000 - - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
40. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 1.000 - - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
41. ubr1 ENSDARG00000060480 71 1 1.000 - - - - - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
42. PLEKHG4B PLEKHG4B 1 1 1.000 - - - - - - - -
43. KCNT2 ENSDARG00000075812 23 1 1.000 - - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
44. si:ch211-133l5.7 ENSDARG00000095633 3 1 1.000 - - - - - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
45. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1 1.000 - - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
46. fam178a fam178a 29 1 1.000 - - - - - - - -
47. nog2 ENSDARG00000043066 233 1 1.000 - - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
48. ATP13A5 ATP13A5 13 1 - - - 1.000 - - - - -
49. PCBP3 ENSDARG00000054378 17 1 - - - 1.000 - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
50. cryaba ENSDARG00000042621 2 1 1.000 - - - - - - - - crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
51. 5S_rRNA_31 5S_rRNA_31 3 1 1.000 - - - - - - - -
52. EPM2AIP1 EPM2AIP1 4 1 1.000 - - - - - - - -
53. ncanb ENSDARG00000005783 22 1 1.000 - - - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
54. col5a3b ENSDARG00000101816 56 1 - - - 1.000 - - - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
55. CU896645.1 CU896645.1 10 1 1.000 - - - - - - - -
56. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
57. gabrr2a ENSDARG00000052982 21 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
58. ndrg1b ENSDARG00000010420 116 1 1.000 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
59. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
60. BX248120.1 BX248120.1 4 1 1.000 - - - - - - - -
61. si:dkeyp-9d4.2 ENSDARG00000029720 9 1 - - - - 1.000 - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
62. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
63. HIST2H4B HIST2H4B 9 1 1.000 - - - - - - - -
64. CLTCL1_1 CLTCL1_1 1 1 1.000 - - - - - - - -
65. efr3ba ENSDARG00000033516 19 1 1.000 - - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
66. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
67. zgc:174710 13 1 1.000 - - - - - - - - zgc:174710
68. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
69. CABZ01069020.1 ENSDARG00000105806 19 1 1.000 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
70. bcat1 ENSDARG00000045568 39 1 1.000 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
71. si:ch211-197k17.3 ENSDARG00000096214 2 1 1.000 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
72. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - 1.000 - - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
73. SNORA63 SNORA63 7 1 1.000 - - - - - - - -
74. tceanc2 ENSDARG00000062919 32 1 1.000 - - - - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
75. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - 1.000 - - - -
76. chrm2a ENSDARG00000098612 5 1 1.000 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
77. palmda ENSDARG00000001913 26 1 - - - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
78. SLC2A13 SLC2A13 74 1 1.000 - - - - - - - -
79. pygl ENSDARG00000002197 192 1 1.000 - - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
80. zgc:165409_1 ENSDARG00000091385 65 1 1.000 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
81. pdcl ENSDARG00000009480 12 1 1.000 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
82. si:dkey-199f5.4 ENSDARG00000110483 4 1 - - - - 1.000 - - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
83. impact ENSDARG00000043288 7 1 - - - - 1.000 - - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
84. cacna2d2 cacna2d2 16 1 - - - 1.000 - - - - -
85. lyve1a ENSDARG00000075833 25 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
86. zgc:112242 11 1 - - - 1.000 - - - - - zgc:112242
87. cx39.4 ENSDARG00000070357 17 1 - - - 1.000 - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
88. spata20 ENSDARG00000013880 46 1 1.000 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
89. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
90. GABRA3 ENSDARG00000090883 5 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
91. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
92. BX469910.2 ENSDARG00000096127 6 1 1.000 - - - - - - - -
93. pex10 ENSDARG00000041511 52 1 1.000 - - - - - - - - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
94. PEG3_24 PEG3_24 5 1 - - - - 1.000 - - - -
95. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 1 - - - 1.000 - - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
96. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
97. si:ch211-76l23.6 si:ch211-76l23.6 68 1 - - - 1.000 - - - - -
98. si:ch211-207e19.16 si:ch211-207e19.16 3 1 - - - 1.000 - - - - -
99. si:dkey-27f16.4 si:dkey-27f16.4 4 1 - - - - 1.000 - - - -
100. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]

There are 387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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