Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf3_1

Gene Name Gene ID Reads Annotation
prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]










Genes with expression patterns similar to prpf3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
2. si:dkey-279j5.1 ENSDARG00000101459 17 2 - - - - - 1.000 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
3. NMUR1 NMUR1 30 1.885 - - - 0.887 - 0.998 - - -
4. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1.875 - - - - - 0.875 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
5. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.76 0.924 - - - - 0.836 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
6. gpr75 ENSDARG00000098526 32 1.735 0.735 - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
7. vwa2 ENSDARG00000075441 44 1.73 - - - - - 0.989 0.741 - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
8. si:dkey-9i23.6 ENSDARG00000094678 58 1.714 - - - - 0.714 1.000 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
9. si:dkey-7a20.9 si:dkey-7a20.9 154 1.708 - - - 0.839 - 0.869 - - -
10. pde12 ENSDARG00000030964 615 1.672 - - - - 0.774 0.898 - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
11. UTS2R 109 1.667 0.838 - - - - 0.829 - - - urotensin 2 receptor
12. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.633 0.735 - - - - 0.898 - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
13. pus3 ENSDARG00000028976 52 1.627 - - - 0.886 0.741 - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
14. DIDO1 ENSDARG00000057940 312 1.605 - - - 0.707 - 0.898 - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
15. lifrb ENSDARG00000039863 102 1.584 - - - 0.883 - 0.701 - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
16. PDXP ENSDARG00000109823 195 1.574 0.853 - - - - 0.721 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
17. tmlhe ENSDARG00000077547 301 1.556 - - - 0.789 0.767 - - - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
18. BX897726.3 BX897726.3 220 1.546 - - - 0.824 - 0.722 - - -
19. si:dkey-4e7.3 ENSDARG00000042124 319 1.542 - - - 0.742 0.800 - - - - si:dkey-4e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-542]
20. GMNC ENSDARG00000068719 28 1.452 0.735 - - - - - - 0.717 - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
21. BX649415.1 BX649415.1 5 1 - - - - - 1.000 - - -
22. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
23. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
24. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
25. pip5k1cb ENSDARG00000100313 3 1 - - - - - 1.000 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
26. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
27. aste1 5 1 - - - - - - 1.000 - - asteroid homolog 1 (Drosophila)
28. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
29. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
30. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
31. SLC22A7 SLC22A7 3 1 - - - - - 1.000 - - -
32. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
33. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
34. CABZ01085657.1 CABZ01085657.1 23 1 - - - - - 1.000 - - -
35. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
36. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
37. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
38. XCR1 XCR1 9 1 - - - - - - 1.000 - -
39. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
40. pde11al ENSDARG00000006151 70 1 - - - - - 1.000 - - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
41. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 1 - - - - - 1.000 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
42. KSR1 KSR1 8 1 - - - - - - 1.000 - -
43. exoc4 ENSDARG00000004336 32 1 - - - - - 1.000 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
44. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
45. PLEKHG3 72 1 - - - - - 1.000 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
46. iffo1a ENSDARG00000062976 5 1 - - - - - 1.000 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
47. CABZ01092722.1 CABZ01092722.1 2 1 - - - - - 1.000 - - -
48. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
49. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
50. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
51. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
52. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
53. BX004785.2 ENSDARG00000093487 10 1 - - - - - 1.000 - - -
54. bend5 ENSDARG00000075624 10 1 - - - - - 1.000 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
55. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
56. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
57. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
58. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
59. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
60. klhl24 klhl24 40 1 - - - - - - 1.000 - -
61. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
62. gabrr2b ENSDARG00000014057 9 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
63. rpn2 ENSDARG00000009724 322 1 - - - - - 1.000 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
64. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
65. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
66. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
67. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
68. sowahaa ENSDARG00000077861 3 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
69. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
70. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
71. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
72. si:dkey-229d11.3 ENSDARG00000093255 41 1 - - - - - 1.000 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
73. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
74. C11H1orf116 C11H1orf116 9 1 - - - - - 1.000 - - -
75. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
76. tmem196b ENSDARG00000090140 20 1 - - - - - 1.000 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
77. si:dkey-197d18.3 si:dkey-197d18.3 7 1 - - - - - 1.000 - - -
78. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
79. GRM1 GRM1 4 1 - - - - - - 1.000 - -
80. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
81. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
82. GLS2 GLS2 10 1 - - - - - - 1.000 - -
83. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
84. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
85. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
86. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
87. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
88. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
89. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
90. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
91. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
92. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
93. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
94. 5S_rRNA_23 5S_rRNA_23 2 1 - - - - - 1.000 - - -
95. BX323854.1 ENSDARG00000030778 3 1 - - - - - - 1.000 - -
96. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
97. GPRIN1 10 1 - - - - - - 1.000 - - G protein regulated inducer of neurite outgrowth 1
98. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
99. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
100. qkib ENSDARG00000002026 15 1 - - - - - - 1.000 - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]

There are 1109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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