Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prpf3_1

Gene Name Gene ID Reads Annotation
prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]










Genes with expression patterns similar to prpf3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
2. si:dkey-279j5.1 ENSDARG00000101459 17 2 - - - - - 1.000 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
3. NMUR1 NMUR1 30 1.885 - - - 0.887 - 0.998 - - -
4. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1.875 - - - - - 0.875 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
5. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.76 0.924 - - - - 0.836 - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
6. gpr75 ENSDARG00000098526 32 1.735 0.735 - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
7. vwa2 ENSDARG00000075441 44 1.73 - - - - - 0.989 0.741 - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
8. si:dkey-9i23.6 ENSDARG00000094678 58 1.714 - - - - 0.714 1.000 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
9. si:dkey-7a20.9 si:dkey-7a20.9 154 1.708 - - - 0.839 - 0.869 - - -
10. pde12 ENSDARG00000030964 615 1.672 - - - - 0.774 0.898 - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
11. UTS2R 109 1.667 0.838 - - - - 0.829 - - - urotensin 2 receptor
12. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.633 0.735 - - - - 0.898 - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
13. pus3 ENSDARG00000028976 52 1.627 - - - 0.886 0.741 - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
14. DIDO1 ENSDARG00000057940 312 1.605 - - - 0.707 - 0.898 - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
15. lifrb ENSDARG00000039863 102 1.584 - - - 0.883 - 0.701 - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
16. PDXP ENSDARG00000109823 195 1.574 0.853 - - - - 0.721 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
17. tmlhe ENSDARG00000077547 301 1.556 - - - 0.789 0.767 - - - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
18. BX897726.3 BX897726.3 220 1.546 - - - 0.824 - 0.722 - - -
19. si:dkey-4e7.3 ENSDARG00000042124 319 1.542 - - - 0.742 0.800 - - - - si:dkey-4e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-542]
20. GMNC ENSDARG00000068719 28 1.452 0.735 - - - - - - 0.717 - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
21. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
22. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
23. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
24. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
25. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
26. 5_8S_rRNA 5_8S_rRNA 24 1 - - - - - 1.000 - - -
27. st3gal1l ENSDARG00000079310 10 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
28. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
29. si:ch211-212k5.2 si:ch211-212k5.2 152 1 - - - - - 1.000 - - -
30. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
31. pip5k1cb ENSDARG00000100313 3 1 - - - - - 1.000 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
32. pde6c ENSDARG00000100397 49 1 - - - - - 1.000 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
33. KLHDC3 ENSDARG00000102772 14 1 - - - - - - 1.000 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
34. si:ch211-215m21.11 si:ch211-215m21.11 2 1 - - - - - 1.000 - - -
35. tusc3 ENSDARG00000078854 4 1 - - - - - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
36. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
37. rpn2 ENSDARG00000009724 322 1 - - - - - 1.000 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
38. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
39. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
40. SLC9B1 SLC9B1 137 1 - - - - - - 1.000 - -
41. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
42. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
43. sybu ENSDARG00000060112 22 1 - - - - - 1.000 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
44. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - - 1.000 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
45. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
46. kcnab1 kcnab1 10 1 - - - - - - 1.000 - -
47. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
48. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - - - - - - 1.000 - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
49. prdm2a ENSDARG00000090721 11 1 - - - - - 1.000 - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
50. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -
51. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
52. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
53. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
54. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
55. UBAC2_1 UBAC2_1 23 1 - - - - - - 1.000 - -
56. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
57. paplnb ENSDARG00000042186 18 1 - - - - - - 1.000 - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
58. aste1 5 1 - - - - - - 1.000 - - asteroid homolog 1 (Drosophila)
59. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
60. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
61. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1 - - - - - 1.000 - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
62. GPRIN1 10 1 - - - - - - 1.000 - - G protein regulated inducer of neurite outgrowth 1
63. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
64. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - 1.000 - -
65. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
66. slc27a6 ENSDARG00000046053 57 1 - - - - - 1.000 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
67. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
68. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
69. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
70. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
71. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - - - - 1.000 - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
72. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
73. tmem37 ENSDARG00000059305 19 1 - - - - - - 1.000 - - transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
74. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
75. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 1 - - - - - 1.000 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
76. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
77. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
78. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
79. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
80. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
81. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
82. bend5 ENSDARG00000075624 10 1 - - - - - 1.000 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
83. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
84. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
85. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
86. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
87. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
88. si:ch211-1f22.17 si:ch211-1f22.17 10 1 - - - - - - 1.000 - -
89. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - - - 1.000 - -
90. si:dkey-197d18.3 si:dkey-197d18.3 7 1 - - - - - 1.000 - - -
91. SDSL ENSDARG00000074698 34 1 - - - - - 1.000 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
92. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
93. ptprua ENSDARG00000092638 479 1 - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
94. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
95. BX572077.3 BX572077.3 20 1 - - - - - - 1.000 - -
96. exoc4 ENSDARG00000004336 32 1 - - - - - 1.000 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
97. GLS2 GLS2 10 1 - - - - - - 1.000 - -
98. neurod6b ENSDARG00000020794 164 1 - - - - - 1.000 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
99. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
100. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -

There are 1109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA