Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prpf39

Gene Name Gene ID Reads Annotation
prpf39 ENSDARG00000100209 3721 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]










Genes with expression patterns similar to prpf39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf39 ENSDARG00000100209 3721 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
2. nhp2l1a nhp2l1a 993 2.45 - 0.795 0.703 - - - 0.952 - -
3. prp19 prp19 4804 2.256 - 0.787 - 0.754 0.715 - - - -
4. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.957 - - - - - - 0.960 - 0.997 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
5. snrpd1 ENSDARG00000011648 8615 1.953 - - - - - - 0.964 - 0.989 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
6. ckap5 ENSDARG00000102674 5068 1.916 - - - - - - 0.932 - 0.984 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
7. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.823 - - - - - - 0.887 - 0.936 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
8. cux1b ENSDARG00000043134 641 1.798 - 0.848 - - - - 0.950 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
9. rpz2 ENSDARG00000091215 765 1.789 - 0.859 - - - - 0.930 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
10. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.782 - - - - - - 0.819 - 0.963 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
11. tfam ENSDARG00000063145 4524 1.759 - 0.826 - - - - 0.933 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
12. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.752 - 0.825 - - - - 0.927 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
13. mcl1a ENSDARG00000009779 2058 1.75 - 0.795 - - - - 0.955 - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
14. cdkn2aipnl ENSDARG00000053395 5107 1.72 - - - 0.764 - - 0.956 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
15. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.716 - 0.829 - - - - 0.887 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
16. tmem203 ENSDARG00000104996 1182 1.714 - 0.762 - - - - 0.952 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
17. cbx5 ENSDARG00000061187 24026 1.71 - - - - - 0.806 - - 0.904 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
18. gnb1b_1 ENSDARG00000104372 3728 1.709 - - - - - 0.756 0.953 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
19. eny2 ENSDARG00000070046 3741 1.709 - - 0.728 - - - 0.981 - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
20. uhrf1 ENSDARG00000103409 3282 1.707 - - - 0.734 - - 0.973 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
21. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.702 - - - - - - 0.713 - 0.989 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
22. sptbn2 ENSDARG00000053956 8452 1.701 - 0.766 - - - - 0.935 - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
23. gbas gbas 735 1.685 - - - - - - 0.961 0.724 -
24. tmbim4 ENSDARG00000014361 2549 1.682 - 0.821 - - - - 0.861 - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
25. ubap2l ENSDARG00000063219 1147 1.674 - - - - - 0.725 0.949 - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
26. pcid2 ENSDARG00000013802 1596 1.671 - 0.713 - - - - 0.958 - - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
27. nrg2a ENSDARG00000077818 854 1.657 - 0.707 - - - - 0.950 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
28. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.649 - - - - - 0.700 0.949 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
29. gigfy2 3194 1.64 - 0.702 - - - - 0.938 - - GRB10 interacting GYF protein 2, transcript variant X1
30. krcp ENSDARG00000040224 5961 1.638 - - - 0.757 - - 0.881 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
31. pawr ENSDARG00000045486 1580 1.623 - 0.818 - - - - 0.805 - - PRKC, apoptosis, WT1, regulator [Source:ZFIN;Acc:ZDB-GENE-041010-108]
32. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 1.611 0.738 0.873 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
33. POLR2H ENSDARG00000038505 2031 1.563 - 0.861 - - - - - 0.702 - info polymerase (RNA) II (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-050417-66]
34. srp72 ENSDARG00000014139 5221 1.558 - - - - - 0.711 0.847 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
35. wu:fc51f04 wu:fc51f04 7074 1.548 - - - 0.737 - - 0.811 - -
36. flot1b ENSDARG00000037998 13600 1.545 - - - - - 0.713 0.832 - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
37. chd4b ENSDARG00000025789 14299 1.53 0.717 - - - - - 0.813 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
38. ATP13A3 ENSDARG00000076622 1000 1.528 - 0.809 - - - 0.719 - - - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
39. urah urah 4152 1.52 - 0.718 - - - - 0.802 - -
40. cd82a ENSDARG00000019098 6761 1.502 - - - - - 0.744 0.758 - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
41. lmnb2 ENSDARG00000101624 11304 1.475 - - - 0.710 - - 0.765 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
42. utp15 ENSDARG00000002720 679 1.474 0.773 0.701 - - - - - - - utp15, U3 small nucleolar ribonucleoprotein, homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3831]
43. pum1 ENSDARG00000099256 5017 1.461 - 0.728 - - - 0.733 - - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
44. orc5 ENSDARG00000021579 536 1.456 - 0.755 - 0.701 - - - - - origin recognition complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2275]
45. kif15 ENSDARG00000012073 1936 1.444 - - - 0.742 0.702 - - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
46. lbr ENSDARG00000014013 4835 1.443 - - - 0.714 0.729 - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
47. taf10 ENSDARG00000068641 3333 1.438 - 0.721 - - - 0.717 - - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
48. arl1 ENSDARG00000101680 5973 1.436 - 0.705 - - - - 0.731 - - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
49. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.43 - - 0.720 - - 0.710 - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
50. hnrpdl 14288 1.418 - - - - 0.705 - 0.713 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
51. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.999 - - - - - - - - 0.999 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
52. BX957337.1 BX957337.1 1685 0.998 - - - - - - - - 0.998
53. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.998 - - - - - - - - 0.998 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
54. TRIM65 ENSDARG00000077098 991 0.998 - - - - - - - - 0.998 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
55. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.998 - - - - - - - - 0.998 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
56. gata3 ENSDARG00000016526 1857 0.998 - - - - - - - - 0.998 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
57. cdk5r1b ENSDARG00000045087 2075 0.998 - - - - - - - - 0.998 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
58. mtmr9 ENSDARG00000015860 1339 0.998 - - - - - - - - 0.998 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
59. NRD1 NRD1 3486 0.998 - - - - - - - - 0.998
60. nup98 ENSDARG00000074955 3998 0.998 - - - - - - - - 0.998 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
61. hddc3 ENSDARG00000020473 2814 0.998 - - - - - - - - 0.998 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
62. agpat9 agpat9 938 0.998 - - - - - - - - 0.998
63. gltscr1 gltscr1 1487 0.998 - - - - - - - - 0.998
64. tmed7 ENSDARG00000046022 2435 0.998 - - - - - - - - 0.998 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
65. nup155 ENSDARG00000001777 3417 0.998 - - - - - - - - 0.998 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
66. zgc:162967 zgc:162967 2132 0.998 - - - - - - - - 0.998
67. cnrip1a ENSDARG00000091683 1491 0.998 - - - - - - - - 0.998 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
68. acbd6 ENSDARG00000039456 2355 0.998 - - - - - - - - 0.998 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
69. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.998 - - - - - - - - 0.998 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
70. NDST1 NDST1 1584 0.998 - - - - - - - - 0.998
71. polr3k ENSDARG00000037835 1552 0.998 - - - - - - - - 0.998 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
72. tsen2 ENSDARG00000091851 1467 0.998 - - - - - - - - 0.998 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
73. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.998 - - - - - - - - 0.998 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
74. C24H7orf50 1417 0.998 - - - - - - - - 0.998 chromosome 24 C7orf50 homolog, transcript variant X2
75. ash1l ENSDARG00000070981 2520 0.997 - - - - - - - - 0.997 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
76. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.997 - - - - - - - - 0.997 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
77. serpinb1 ENSDARG00000055416 1320 0.997 - - - - - - - - 0.997 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
78. BX296557.2 BX296557.2 1083 0.997 - - - - - - - - 0.997
79. smyd5 ENSDARG00000071669 1194 0.997 - - - - - - - - 0.997 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
80. jam3a ENSDARG00000114589 630 0.997 - - - - - - - - 0.997 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
81. spag1a ENSDARG00000004017 1140 0.997 - - - - - - - - 0.997 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
82. foxp2 ENSDARG00000005453 1504 0.997 - - - - - - - - 0.997 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
83. jam2b ENSDARG00000079071 1031 0.997 - - - - - - - - 0.997 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
84. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.997 - - - - - - - - 0.997 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
85. vsnl1a ENSDARG00000023228 1584 0.996 - - - - - - - - 0.996 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
86. BAZ2B BAZ2B 3285 0.996 - - - - - - - - 0.996
87. kbtbd12 ENSDARG00000001882 1196 0.996 - - - - - - - - 0.996 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
88. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.996 - - - - - - - - 0.996 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
89. ubqln4 ENSDARG00000052975 6453 0.996 - - - - - - - - 0.996 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
90. igfbp5b ENSDARG00000025348 3803 0.994 - - - - - - - - 0.994 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
91. eya2 ENSDARG00000018984 1768 0.994 - - - - - - - - 0.994 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
92. naa15a ENSDARG00000003213 5889 0.994 - - - - - - - - 0.994 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
93. mier1b ENSDARG00000001447 1680 0.994 - - - - - - - - 0.994 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
94. stip1 ENSDARG00000004906 7742 0.994 - - - - - - - - 0.994 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
95. rnf115 ENSDARG00000062450 1284 0.994 - - - - - - - - 0.994 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
96. ndufa2 ENSDARG00000021984 4754 0.993 - - - - - - - - 0.993 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
97. vta1 ENSDARG00000013732 6072 0.992 - - - - - - - - 0.992 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
98. apex1 ENSDARG00000045843 6345 0.992 - - - - - - - - 0.992 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
99. C1QBP ENSDARG00000039887 11186 0.991 - - - - - - - - 0.991 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
100. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 0.99 - - - - - - - - 0.990 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]

There are 1277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA