Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prpf18

Gene Name Gene ID Reads Annotation
prpf18 ENSDARG00000058306, ENSDARG00000113879 512 PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]










Genes with expression patterns similar to prpf18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
2. eltd1 eltd1 295 2.475 - 0.749 - - - 0.849 0.877 - -
3. traip ENSDARG00000011262 410 2.182 - - - - - 0.747 0.708 0.727 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
4. si:ch211-162i8.5 ENSDARG00000111716 76 1.751 - - - - - 0.882 0.869 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
5. slc30a10 ENSDARG00000103983 46 1.72 - - - - - 0.881 0.839 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
6. tbcela ENSDARG00000002682 1179 1.697 - - - - - 0.822 0.875 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
7. si:ch211-208h1.1 si:ch211-208h1.1 262 1.691 - - - - - 0.827 0.864 - -
8. si:ch211-163b2.4 ENSDARG00000094890 140 1.69 - - - - - 0.884 0.806 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
9. C4H12orf45 C4H12orf45 483 1.689 - - - - - 0.848 0.841 - -
10. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.67 - - - - - 0.872 0.798 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
11. zgc:171489 ENSDARG00000052300 119 1.663 - - - - - 0.818 0.845 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
12. nanp ENSDARG00000075143, ENSDARG00000114467 328 1.651 0.834 - - - - 0.817 - - - N-acetylneuraminic acid phosphatase [Source:ZFIN;Acc:ZDB-GENE-050522-94]
13. cdk10 ENSDARG00000034256 166 1.646 - - - - - 0.772 0.874 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
14. mgat3 mgat3 195 1.646 0.823 - - - - 0.823 - - -
15. fam96b 2255 1.64 - 0.823 - - - 0.817 - - - family with sequence similarity 96, member B
16. LYAR ENSDARG00000098507 1506 1.631 - 0.776 - - - - 0.855 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
17. LIN9 ENSDARG00000028475 227 1.629 - - - - - 0.795 0.834 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
18. nin ENSDARG00000060298 1558 1.627 - 0.856 - - - 0.771 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
19. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.624 - 0.840 - - - 0.784 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
20. zhx2 zhx2 365 1.617 0.771 - - - - 0.846 - - -
21. wrb ENSDARG00000074271, ENSDARG00000110353 970 1.617 - 0.864 - - 0.753 - - - - tryptophan rich basic protein [Source:ZFIN;Acc:ZDB-GENE-030131-7696]
22. elk1 ENSDARG00000078066 414 1.601 - - - - - 0.843 0.758 - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
23. CDA 491 1.601 - 0.796 - - - 0.805 - - - cytidine deaminase
24. cplx4c ENSDARG00000094889 253 1.598 - 0.849 - - - 0.749 - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
25. SYTL1 ENSDARG00000070094 282 1.597 0.722 - - - - - 0.875 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
26. ndst3 ENSDARG00000041776 605 1.597 - - - - - 0.845 0.752 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
27. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.596 - 0.792 - - - 0.804 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
28. tmem41b ENSDARG00000080006 1060 1.593 - 0.836 - - - 0.757 - - - transmembrane protein 41B [Source:ZFIN;Acc:ZDB-GENE-061215-138]
29. SORCS2 ENSDARG00000077465 185 1.59 - 0.751 - - - 0.839 - - - sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
30. CT867948.2 CT867948.2 131 1.582 - - - - - 0.756 0.826 - -
31. flrt3 ENSDARG00000076895 3516 1.576 - 0.708 - - - 0.868 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
32. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.575 0.712 - - - - - 0.863 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
33. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 1.572 - - - - - 0.850 0.722 - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
34. CABZ01049057.1 CABZ01049057.1 479 1.569 - - - - - 0.836 - 0.733 -
35. coq4 ENSDARG00000104733 402 1.565 - 0.737 - - - 0.828 - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
36. ARHGEF12 ARHGEF12 392 1.561 - 0.844 - - - - 0.717 - -
37. thtpa ENSDARG00000063049 286 1.56 0.720 - - - - - 0.840 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
38. ARHGAP32 ARHGAP32 670 1.559 - 0.717 - - - 0.842 - - -
39. hbz 327 1.555 0.806 0.749 - - - - - - - hemoglobin subunit zeta
40. dhrs7 ENSDARG00000003444 812 1.555 - - - - - 0.710 0.845 - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
41. C1H10orf12 C1H10orf12 1663 1.554 - 0.702 - - - 0.852 - - -
42. slc7a3a ENSDARG00000020645 1458 1.551 - - - - - 0.795 0.756 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
43. zbtb17 ENSDARG00000074548 661 1.543 - 0.779 - - - - - 0.764 - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
44. slc7a10a ENSDARG00000008100 178 1.538 - - - - - 0.808 0.730 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
45. MFSD3 MFSD3 407 1.534 - 0.708 - - - - 0.826 - -
46. slc16a9b ENSDARG00000104687 826 1.533 - - - - - 0.786 0.747 - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
47. ASPH ENSDARG00000055945 214 1.531 - 0.791 - - - - 0.740 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
48. agps ENSDARG00000042821 203 1.531 - - - - - - 0.810 0.721 - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
49. rad54b ENSDARG00000092134 231 1.528 0.720 - - - - 0.808 - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
50. plekhg6 ENSDARG00000086056 368 1.526 0.776 - - - - 0.750 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
51. arid2 ENSDARG00000007413 4413 1.524 0.718 0.806 - - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
52. zgc:113025 zgc:113025 619 1.522 - - - - - 0.792 0.730 - -
53. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 1.522 0.759 0.763 - - - - - - - phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
54. xpnpep3 ENSDARG00000007916 166 1.522 - - - - - 0.708 0.814 - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
55. ift57 ENSDARG00000021022 288 1.519 - - - - - 0.766 - 0.753 - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
56. lhfpl2b ENSDARG00000098153 132 1.519 - - - - - 0.706 0.813 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
57. samd1b ENSDARG00000079062 280 1.517 - - 0.717 - - 0.800 - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
58. zgc:162913 zgc:162913 155 1.513 0.788 0.725 - - - - - - -
59. exosc9 ENSDARG00000006392 906 1.508 - - - - - 0.756 0.752 - - exosome component 9 [Source:ZFIN;Acc:ZDB-GENE-041010-180]
60. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.507 - 0.725 - - - 0.782 - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
61. tgfbrap1 ENSDARG00000061508 504 1.505 - - - - - 0.786 0.719 - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
62. ATG4D ATG4D 648 1.496 - - - - - 0.788 0.708 - -
63. ruvbl1 ENSDARG00000002591 2381 1.492 - 0.743 - - - 0.749 - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
64. CR388132.2 ENSDARG00000104041 640 1.434 0.720 - - - - 0.714 - - -
65. sult1st1 ENSDARG00000028275 806 1.427 - 0.724 - - - - 0.703 - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
66. wrap53 ENSDARG00000086150 975 1.419 - 0.706 - - - 0.713 - - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
67. BX927318.1 ENSDARG00000097713 199 1.419 - - - - - 0.705 0.714 - -
68. LRCH1 ENSDARG00000078778 407 0.957 - - - - - - 0.957 - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
69. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.947 - - - - - - 0.947 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
70. lace1a lace1a 561 0.942 - - - - - - 0.942 - -
71. gnav1 ENSDARG00000043006 305 0.941 - - - - - 0.941 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
72. MAN2A2 ENSDARG00000063101 922 0.935 - - - - - 0.935 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
73. sema3fa ENSDARG00000011163 759 0.934 - - - - - - 0.934 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
74. crabp2a_1 ENSDARG00000073978 888 0.934 - - - - - 0.934 - - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
75. C8H1orf194 C8H1orf194 111 0.926 - - - - - 0.926 - - -
76. si:ch211-212g7.6 ENSDARG00000079369 707 0.926 - - - - - 0.926 - - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
77. pld3 ENSDARG00000068199 205 0.923 - - - - - 0.923 - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
78. RFX7 885 0.923 - - - - - - 0.923 - - regulatory factor X, 7
79. dlgap1b ENSDARG00000037415 658 0.92 - 0.920 - - - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
80. cdc37l1 ENSDARG00000044265 360 0.918 - 0.918 - - - - - - - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
81. pptc7a ENSDARG00000011122 739 0.916 - - - - - - 0.916 - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
82. cacna2d1a ENSDARG00000014804 1924 0.911 - 0.911 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
83. cspg4 ENSDARG00000078227 1084 0.908 - 0.908 - - - - - - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
84. PKN1 PKN1 42 0.907 - - - - - 0.907 - - -
85. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 0.905 - - - - - 0.905 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
86. gpr133 gpr133 83 0.904 - - - - - 0.904 - - -
87. sall4 ENSDARG00000044485 1694 0.903 - - - - - 0.903 - - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
88. knop1 ENSDARG00000077721 2198 0.903 - - - - - - 0.903 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
89. shc2 ENSDARG00000062080, ENSDARG00000111448 426 0.902 - - - - - 0.902 - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
90. BX323449.2 BX323449.2 50 0.901 - - - - - 0.901 - - -
91. snx29 ENSDARG00000077317 239 0.9 - - - - - 0.900 - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
92. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 0.9 - - - - - 0.900 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
93. si:dkey-102c8.1 si:dkey-102c8.1 85 0.899 - - - - - - 0.899 - -
94. lmbr1l ENSDARG00000004745 861 0.899 - - - - - - 0.899 - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
95. kcng1 ENSDARG00000099038 23 0.898 - - - - - 0.898 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
96. adam19b ENSDARG00000067545 162 0.898 - - - - - - 0.898 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
97. msxe msxe 362 0.898 - - - - - 0.898 - - -
98. MIS12 ENSDARG00000026454 649 0.897 - - - - - 0.897 - - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
99. tmem79a ENSDARG00000071250 48 0.896 - - - - - - 0.896 - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
100. nradd ENSDARG00000057143 1159 0.896 - - - - - 0.896 - - - neurotrophin receptor associated death domain [Source:ZFIN;Acc:ZDB-GENE-030131-2537]

There are 1840 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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