Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prox1b

Gene Name Gene ID Reads Annotation
prox1b ENSDARG00000088810, ENSDARG00000113014 33 prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]










Genes with expression patterns similar to prox1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prox1b ENSDARG00000088810, ENSDARG00000113014 33 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
2. npnt ENSDARG00000018721 19 1.94 - - - - 0.940 - 1.000 - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
3. zgc:66432 zgc:66432 16 1.94 - - - - 0.940 - 1.000 - -
4. PSMB11_1 PSMB11_1 2 1.94 - - - - 0.940 - 1.000 - -
5. hydin ENSDARG00000056764, ENSDARG00000114934 16 1.921 - - - - 0.921 - 1.000 - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
6. gpr55a ENSDARG00000043447 12 1.918 - - - - 0.918 - 1.000 - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
7. si:dkey-157e10.7 si:dkey-157e10.7 105 1.9 - - - - - 0.900 1.000 - -
8. CKMT2 CKMT2 10 1.894 - 0.894 - - - - 1.000 - -
9. si:dkey-91f15.8 18 1.848 - - - - 0.848 - 1.000 - - si:dkey-91f15.8, transcript variant X1
10. gatsl3 7 1.848 - 0.848 - - - - 1.000 - - GATS protein-like 3
11. APOH APOH 2 1.834 - 0.894 - - 0.940 - - - -
12. si:dkey-61f9.2 2 1.834 - 0.894 - - 0.940 - - - - si:dkey-61f9.2
13. ros1 ENSDARG00000087197 9 1.821 - - - - - - 1.000 0.821 - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
14. PEG3_27 PEG3_27 10 1.817 - 0.894 - - 0.923 - - - -
15. cdhr1a ENSDARG00000004643 7 1.798 - - - - 0.798 - 1.000 - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
16. trim35-1 ENSDARG00000052037 43 1.796 - 0.796 - - - 1.000 - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
17. zgc:73228 zgc:73228 97 1.795 - 0.894 - - - 0.901 - - -
18. C11H3orf14 C11H3orf14 15 1.77 - - - - 0.770 - 1.000 - -
19. tgfbr1b ENSDARG00000042259 219 1.768 - - - - - 0.834 0.934 - - transforming growth factor, beta receptor 1 b [Source:ZFIN;Acc:ZDB-GENE-091027-1]
20. arhgef6 ENSDARG00000006683 59 1.747 - 0.747 - - - - 1.000 - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
21. mir15a-1 36 1.746 - - - - - 0.746 1.000 - - microRNA 15a-1
22. hsd17b7_1 ENSDARG00000088140 36 1.746 - 1.000 - - - 0.746 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
23. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.746 - - - - - 0.746 1.000 - -
24. zgc:77112 ENSDARG00000015657 24 1.746 - - - - - 0.746 1.000 - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
25. 5_8S_rRNA 5_8S_rRNA 24 1.744 - 0.894 - 0.850 - - - - -
26. SH2D1B SH2D1B 60 1.743 - - - 0.743 - - 1.000 - -
27. WNK2 ENSDARG00000104989 429 1.71 - 0.866 - - - 0.844 - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
28. si:dkey-54f18.2 si:dkey-54f18.2 27 1.704 - 0.894 - - 0.810 - - - -
29. PLA2R1 ENSDARG00000077474 45 1.7 - 0.894 - - - - - 0.806 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
30. DPYD DPYD 52 1.675 - 0.894 - - - - 0.781 - -
31. CT027762.3 CT027762.3 17 1.664 - - - - 0.941 - - 0.723 -
32. twist1b ENSDARG00000076010 88 1.659 - 0.946 - - - - 0.713 - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
33. CHCHD5 ENSDARG00000091754 35 1.632 - - 0.714 - 0.918 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
34. dab1b ENSDARG00000003290 7 1.627 - - - - 0.881 0.746 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
35. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.611 - 0.820 - - 0.791 - - - -
36. slc1a3b ENSDARG00000043148 431 1.599 - - - - 0.755 0.844 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
37. APOBEC2 APOBEC2 9 1.58 - - 0.750 - - - 0.830 - -
38. si:dkey-234k7.2 si:dkey-234k7.2 4 1.577 - - - - 0.831 0.746 - - -
39. thsd7a thsd7a 194 1.551 - 0.777 - - - 0.774 - - -
40. CAMSAP3 ENSDARG00000059475 263 1.544 - - - - - 0.837 - 0.707 - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
41. si:rp71-84d19.2 si:rp71-84d19.2 34 1.498 - 0.760 - - - - 0.738 - -
42. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.488 - - - - - - 0.784 0.704 - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
43. fgf11b ENSDARG00000043907 16 1.459 - - - - - 0.746 0.713 - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
44. FAM177A1 ENSDARG00000079636 19 1.457 - - - 0.711 - 0.746 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
45. ube2b ENSDARG00000026035 51 1.453 - - - 0.742 - - - 0.711 - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
46. SH3RF2 ENSDARG00000101178 0 1 - - - - - - 1.000 - - SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]
47. fgl2 fgl2 9 1 - - - - - - 1.000 - -
48. TRIM35_5 TRIM35_5 1 1 - - - - - - 1.000 - -
49. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - - 1.000 - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
50. CABZ01006835.1 CABZ01006835.1 92 1 - - - - - - 1.000 - -
51. rs1 rs1 70 1 - - - - - - 1.000 - -
52. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - - 1.000 - -
53. kcnh4 kcnh4 6 1 - - - - - - 1.000 - -
54. C20H2orf70 C20H2orf70 8 1 - - - - - - 1.000 - -
55. zzef1 ENSDARG00000094380 4 1 - - - - - - 1.000 - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
56. drd4a ENSDARG00000038363 82 1 - 1.000 - - - - - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
57. B2M ENSDARG00000053136 2 1 - - - - - - 1.000 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
58. LRRC41 LRRC41 11 1 - - - - - - 1.000 - -
59. FP325123.1_1 ENSDARG00000105359 38 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
60. C1GALT1_1 C1GALT1_1 1 1 - - - - - - 1.000 - -
61. TP53I3 60 1 - - - - - - 1.000 - - tumor protein p53 inducible protein 3, transcript variant X1
62. si:dkeyp-80d11.1 ENSDARG00000101087 91 1 - - - - - - 1.000 - - si:dkeyp-80d11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4126]
63. zgc:158856 zgc:158856 23 1 - - - - - - 1.000 - -
64. psme2 ENSDARG00000033144 3 1 - - - - - - 1.000 - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
65. zgc:66473_1 ENSDARG00000087289, ENSDARG00000087375 1 1 - - - - - - 1.000 - - zgc:66473 [Source:ZFIN;Acc:ZDB-GENE-030131-5708]
66. si:dkey-125h23.1 si:dkey-125h23.1 23 1 - - - - - - 1.000 - -
67. OMA1 ENSDARG00000090503 19 1 - - - - - - 1.000 - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
68. wu:fb64b08 wu:fb64b08 8 1 - - - - - - 1.000 - -
69. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - - - - 1.000 - -
70. man2a1 ENSDARG00000102200 12 1 - - - - - - 1.000 - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
71. RAI1 ENSDARG00000076679 59 1 - - - - - 1.000 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
72. CU695076.1 CU695076.1 7 1 - - - - - 1.000 - - -
73. prkacbb_1 ENSDARG00000059125 83 1 - - - - - - 1.000 - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
74. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - 1.000 - -
75. CR356223.1 ENSDARG00000093865 1 1 - - - - - - 1.000 - -
76. TNFRSF14 TNFRSF14 330 1 - - - - - - 1.000 - -
77. si:ch211-278p7.5 si:ch211-278p7.5 0 1 - - - - - - 1.000 - -
78. BX664622.2 BX664622.2 1 1 - - - - - - 1.000 - -
79. dync1i2a ENSDARG00000078386 53 1 - - - - - - 1.000 - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
80. NWD1 ENSDARG00000076110 3 1 - - - - - - 1.000 - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
81. atp8b1 ENSDARG00000060980 181 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
82. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - - 1.000 - -
83. AHSG AHSG 3 1 - - - - - - 1.000 - -
84. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - 1.000 - -
85. si:dkey-10g2.5 si:dkey-10g2.5 72 1 - - - - - - 1.000 - -
86. BX569789.2 BX569789.2 12 1 - - - - - - 1.000 - -
87. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - 1.000 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
88. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - - - - 1.000 - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
89. zgc:195170 ENSDARG00000076264 3 1 - - - - - - 1.000 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
90. slc4a4b ENSDARG00000044808 9 1 - - - - - - 1.000 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
91. im:6903943 im:6903943 26 1 - - - - - - 1.000 - -
92. BX005082.1 ENSDARG00000098558 2 1 - - - - - - 1.000 - -
93. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - 1.000 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
94. si:dkey-85n7.8 ENSDARG00000095793 31 1 - - - - - - 1.000 - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
95. gbp3 ENSDARG00000003244 90 1 - - - - - - 1.000 - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
96. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - 1.000 - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
97. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - - - - 1.000 - -
98. RBBP6_6 RBBP6_6 1 1 - - - - - - 1.000 - -
99. CYTH4 CYTH4 2 1 - - - - - - 1.000 - -
100. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - - - - 1.000 - -

There are 1020 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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