Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prox1b

Gene Name Gene ID Reads Annotation
prox1b ENSDARG00000088810, ENSDARG00000113014 33 prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]










Genes with expression patterns similar to prox1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prox1b ENSDARG00000088810, ENSDARG00000113014 33 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
2. PSMB11_1 PSMB11_1 2 1.94 - - - - 0.940 - 1.000 - -
3. npnt ENSDARG00000018721 19 1.94 - - - - 0.940 - 1.000 - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
4. zgc:66432 zgc:66432 16 1.94 - - - - 0.940 - 1.000 - -
5. hydin ENSDARG00000056764, ENSDARG00000114934 16 1.921 - - - - 0.921 - 1.000 - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
6. gpr55a ENSDARG00000043447 12 1.918 - - - - 0.918 - 1.000 - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
7. si:dkey-157e10.7 si:dkey-157e10.7 105 1.9 - - - - - 0.900 1.000 - -
8. CKMT2 CKMT2 10 1.894 - 0.894 - - - - 1.000 - -
9. si:dkey-91f15.8 18 1.848 - - - - 0.848 - 1.000 - - si:dkey-91f15.8, transcript variant X1
10. gatsl3 7 1.848 - 0.848 - - - - 1.000 - - GATS protein-like 3
11. si:dkey-61f9.2 2 1.834 - 0.894 - - 0.940 - - - - si:dkey-61f9.2
12. APOH APOH 2 1.834 - 0.894 - - 0.940 - - - -
13. ros1 ENSDARG00000087197 9 1.821 - - - - - - 1.000 0.821 - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
14. PEG3_27 PEG3_27 10 1.817 - 0.894 - - 0.923 - - - -
15. cdhr1a ENSDARG00000004643 7 1.798 - - - - 0.798 - 1.000 - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
16. trim35-1 ENSDARG00000052037 43 1.796 - 0.796 - - - 1.000 - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
17. zgc:73228 zgc:73228 97 1.795 - 0.894 - - - 0.901 - - -
18. C11H3orf14 C11H3orf14 15 1.77 - - - - 0.770 - 1.000 - -
19. tgfbr1b ENSDARG00000042259 219 1.768 - - - - - 0.834 0.934 - - transforming growth factor, beta receptor 1 b [Source:ZFIN;Acc:ZDB-GENE-091027-1]
20. arhgef6 ENSDARG00000006683 59 1.747 - 0.747 - - - - 1.000 - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
21. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.746 - - - - - 0.746 1.000 - -
22. zgc:77112 ENSDARG00000015657 24 1.746 - - - - - 0.746 1.000 - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
23. hsd17b7_1 ENSDARG00000088140 36 1.746 - 1.000 - - - 0.746 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
24. mir15a-1 36 1.746 - - - - - 0.746 1.000 - - microRNA 15a-1
25. 5_8S_rRNA 5_8S_rRNA 24 1.744 - 0.894 - 0.850 - - - - -
26. SH2D1B SH2D1B 60 1.743 - - - 0.743 - - 1.000 - -
27. WNK2 ENSDARG00000104989 429 1.71 - 0.866 - - - 0.844 - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
28. si:dkey-54f18.2 si:dkey-54f18.2 27 1.704 - 0.894 - - 0.810 - - - -
29. PLA2R1 ENSDARG00000077474 45 1.7 - 0.894 - - - - - 0.806 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
30. DPYD DPYD 52 1.675 - 0.894 - - - - 0.781 - -
31. CT027762.3 CT027762.3 17 1.664 - - - - 0.941 - - 0.723 -
32. twist1b ENSDARG00000076010 88 1.659 - 0.946 - - - - 0.713 - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
33. CHCHD5 ENSDARG00000091754 35 1.632 - - 0.714 - 0.918 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
34. dab1b ENSDARG00000003290 7 1.627 - - - - 0.881 0.746 - - - Dab, reelin signal transducer, homolog 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060421-7958]
35. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.611 - 0.820 - - 0.791 - - - -
36. slc1a3b ENSDARG00000043148 431 1.599 - - - - 0.755 0.844 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
37. APOBEC2 APOBEC2 9 1.58 - - 0.750 - - - 0.830 - -
38. si:dkey-234k7.2 si:dkey-234k7.2 4 1.577 - - - - 0.831 0.746 - - -
39. thsd7a thsd7a 194 1.551 - 0.777 - - - 0.774 - - -
40. CAMSAP3 ENSDARG00000059475 263 1.544 - - - - - 0.837 - 0.707 - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
41. si:rp71-84d19.2 si:rp71-84d19.2 34 1.498 - 0.760 - - - - 0.738 - -
42. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.488 - - - - - - 0.784 0.704 - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
43. fgf11b ENSDARG00000043907 16 1.459 - - - - - 0.746 0.713 - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
44. FAM177A1 ENSDARG00000079636 19 1.457 - - - 0.711 - 0.746 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
45. ube2b ENSDARG00000026035 51 1.453 - - - 0.742 - - - 0.711 - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
46. TRAF2 TRAF2 13 1 - - - - - - 1.000 - -
47. CR847543.1 ENSDARG00000086708 155 1 - - - - - - 1.000 - -
48. abcb4 ENSDARG00000010936 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:ZFIN;Acc:ZDB-GENE-080204-52]
49. si:dkey-80c24.5 ENSDARG00000092501 6 1 - - - - - - 1.000 - - si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
50. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - - - 1.000 - -
51. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - - - - - - 1.000 - -
52. lft1 ENSDARG00000019920 66 1 - - - - - - 1.000 - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
53. BSN_1 BSN_1 21 1 - - - - - 1.000 - - -
54. BX323793.3 BX323793.3 7 1 - - - - - - 1.000 - -
55. si:ch211-141e20.6 si:ch211-141e20.6 25 1 - - - - - - 1.000 - -
56. rxfp3.2a 11 1 - - - - - - 1.000 - - relaxin/insulin-like family peptide receptor 3.2a
57. si:ch1073-15f19.2 ENSDARG00000095640 4 1 - 1.000 - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
58. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - - 1.000 - -
59. ZNF337_8 ZNF337_8 63 1 - - - - - - 1.000 - -
60. sc:d0661 sc:d0661 12 1 - - - - - - 1.000 - -
61. opn5 ENSDARG00000070110 18 1 - - - - - - 1.000 - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
62. zgc:194252 ENSDARG00000057142 11 1 - - - - - - 1.000 - - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
63. RC3H1 RC3H1 22 1 - - - - - - 1.000 - -
64. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1 - - - - - 1.000 - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
65. aanat2 ENSDARG00000079802 175 1 - - - - - - 1.000 - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
66. plce1 ENSDARG00000087921 44 1 - - - - - - 1.000 - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
67. LAMTOR1 ENSDARG00000076464 27 1 - - - - - - 1.000 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
68. rbbp9 ENSDARG00000040713 12 1 - - - - - - 1.000 - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
69. BX571853.2 ENSDARG00000110441 21 1 - - - - - 1.000 - - -
70. BAIAP3 ENSDARG00000079264 31 1 - - - - - - 1.000 - - BAI1-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-130530-863]
71. CABZ01072557.1 CABZ01072557.1 9 1 - - - - - - 1.000 - -
72. si:rp71-40n14.1 si:rp71-40n14.1 0 1 - - - - - - 1.000 - -
73. plac8.1 ENSDARG00000043729 1 1 - - - - - - 1.000 - - placenta-specific 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050809-124]
74. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - - - 1.000 - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
75. si:ch211-263m18.4 ENSDARG00000093353 27 1 - - - - - - 1.000 - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
76. KLHL10 KLHL10 1 1 - - - - - - 1.000 - -
77. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - - 1.000 - -
78. tagapa ENSDARG00000002353 20 1 - - - - - - 1.000 - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
79. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - - - - - - 1.000 - -
80. KCTD20 6 1 - - - - - - 1.000 - - potassium channel tetramerization domain containing 20, transcript variant X2
81. CU855899.1 CU855899.1 2 1 - - - - - - 1.000 - -
82. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - 1.000 - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
83. CU302436.3 CU302436.3 174 1 - - - - - - 1.000 - -
84. ms4a17a.6 ENSDARG00000007018 6 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
85. si:ch211-154k18.1 si:ch211-154k18.1 0 1 - - - - - - 1.000 - -
86. 5S_rRNA_25 5S_rRNA_25 0 1 - - - - - - 1.000 - -
87. DOK2 ENSDARG00000075818 8 1 - - - - - - 1.000 - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
88. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - 1.000 - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
89. mir430c-2 2 1 - - - - - - 1.000 - - microRNA 430c-2
90. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 - - - - - - 1.000 - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
91. si:dkeyp-98a7.1 100 1 - 1.000 - - - - - - - si:dkeyp-98a7.1
92. CU856140.1 CU856140.1 4316 1 - - - - - - 1.000 - -
93. si:ch211-190k17.19 ENSDARG00000095756 19 1 - - - - - - 1.000 - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
94. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 1 - - - - - - 1.000 - - cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
95. pde5ab ENSDARG00000051915 18 1 - - - - - - 1.000 - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
96. klhl6 ENSDARG00000026990 24 1 - - - - - - 1.000 - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
97. BX005421.5 BX005421.5 0 1 - - - - - - 1.000 - -
98. RBBP6_11 RBBP6_11 6 1 - - - - - - 1.000 - -
99. zgc:175284 ENSDARG00000078159 29 1 - - - - - - 1.000 - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
100. SUSD1 ENSDARG00000058839 4 1 - - - - - - 1.000 - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]

There are 1020 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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