Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prox1a

Gene Name Gene ID Reads Annotation
prox1a ENSDARG00000055158 1411 prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]










Genes with expression patterns similar to prox1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prox1a ENSDARG00000055158 1411 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
2. btg2 ENSDARG00000020298 6616 2.451 - - - - 0.925 0.797 0.729 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
3. kif5bb 1645 2.235 - 0.810 - - - 0.701 - - 0.724 kinesin family member 5B, b
4. klf7a ENSDARG00000073857 1226 2.21 - - - - - 0.709 0.797 0.704 - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
5. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.798 - - - - 0.996 0.802 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
6. commd3 ENSDARG00000045402 1601 1.764 - - - - 0.995 0.769 - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
7. mdkb ENSDARG00000020708 5393 1.754 - - - - 0.913 0.841 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
8. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.742 - - - - 0.852 0.890 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
9. kansl3 ENSDARG00000029556 2487 1.74 - - - - 0.978 0.762 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
10. rnf11a ENSDARG00000010442 592 1.74 - - - - 0.995 0.745 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
11. ubtf ENSDARG00000035066 4070 1.737 - - - - 0.981 0.756 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
12. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.724 - - - - 0.995 - - - 0.729 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
13. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.705 - - - - 0.971 0.734 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
14. AP3B2 1874 1.703 - - - - 0.894 0.809 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
15. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.702 - - - - 0.993 - 0.709 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
16. irx5a ENSDARG00000034043 1694 1.702 - - - - 0.981 0.721 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
17. CR387996.1 ENSDARG00000097774 3037 1.693 - - - - 0.991 0.702 - - -
18. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.684 - - - - 0.940 0.744 - - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
19. rnf44 ENSDARG00000068582 1612 1.683 - - - - 0.965 - 0.718 - - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
20. supt16h ENSDARG00000079949 4755 1.669 - 0.736 - - 0.933 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
21. ube2e1 ENSDARG00000116649 10656 1.636 - - - - 0.852 0.784 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
22. cd99l2 ENSDARG00000056722 5036 1.606 - - - - - 0.792 0.814 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
23. CABZ01072954.1 CABZ01072954.1 2330 1.599 - 0.786 - - - 0.813 - - -
24. MEGF9_1 MEGF9_1 537 1.556 - - - - - 0.825 0.731 - -
25. elavl1 11672 1.554 - - - - 0.799 0.755 - - - ELAV like RNA binding protein 1, transcript variant X3
26. si:dkey-25e11.10 si:dkey-25e11.10 955 1.553 0.741 - - - - 0.812 - - -
27. gap43 ENSDARG00000099744 4114 1.551 - - - - - 0.832 0.719 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
28. CACFD1 ENSDARG00000090818 1298 1.541 - - - - - 0.835 0.706 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
29. bri3bp ENSDARG00000010108 6295 1.538 - - - - - 0.800 0.738 - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
30. xylt1 ENSDARG00000061248 2357 1.531 - - - - - 0.827 0.704 - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
31. nrarpb ENSDARG00000018958 6225 1.53 - - - - - 0.821 - - 0.709 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
32. tmsb ENSDARG00000054911 6411 1.529 - 0.704 - - - 0.825 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
33. drg1 ENSDARG00000039345 7545 1.527 - - - - - 0.791 0.736 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
34. onecutl ENSDARG00000040253 2143 1.524 - - - - - 0.786 0.738 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
35. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.523 - - - - - 0.822 0.701 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
36. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.508 - - - - - 0.804 0.704 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
37. b4galt6 ENSDARG00000010301 2005 1.506 - - - 0.716 - 0.790 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
38. DVL3 1098 1.502 - - - - - 0.729 0.773 - - dishevelled segment polarity protein 3
39. ncana 1537 1.5 - - - - - 0.799 0.701 - - neurocan a
40. tmtc2 tmtc2 798 1.496 - - - - - 0.758 - 0.738 -
41. hnrnpub ENSDARG00000004735 16496 1.49 - - - - - 0.740 0.750 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
42. hecw1 hecw1 241 1.485 0.717 - - - - 0.768 - - -
43. smad3b ENSDARG00000010207 951 1.481 - - - 0.721 - 0.760 - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
44. KCNS3 KCNS3 82 1.481 - - - - - 0.762 0.719 - -
45. wu:fq41a10 wu:fq41a10 7009 1.473 - 0.718 - - - - 0.755 - -
46. pacsin1b ENSDARG00000042128 1051 1.471 - - - 0.711 - 0.760 - - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
47. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.47 - - - - - 0.762 0.708 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
48. isl1 ENSDARG00000004023 981 1.463 - - - - - 0.741 - - 0.722 ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
49. xpr1 xpr1 840 1.461 - - - - - 0.729 0.732 - -
50. rtca ENSDARG00000002215 3558 1.458 - 0.715 - - - 0.743 - - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
51. KCNA3 KCNA3 748 1.45 - - - 0.746 - - 0.704 - -
52. MAP6 MAP6 643 1.45 - - - - - 0.743 - 0.707 -
53. ptprsb 1085 1.447 - - - - - 0.729 0.718 - - protein tyrosine phosphatase, receptor type, s, b
54. bcr ENSDARG00000079286 578 1.445 - - - - - 0.731 - 0.714 - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
55. phgdh ENSDARG00000001873 8325 1.442 - 0.719 - - - 0.723 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
56. ccnt2b ENSDARG00000036510 3353 1.441 - 0.714 - - - 0.727 - - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
57. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.415 - - - - 0.710 0.705 - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
58. her12 ENSDARG00000032963 754 1.408 0.705 - - - - 0.703 - - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
59. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.996 - - - - 0.996 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
60. st3gal4 ENSDARG00000041006 636 0.996 - - - - 0.996 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
61. shisa3 ENSDARG00000075467 485 0.996 - - - - 0.996 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
62. reep3l reep3l 608 0.996 - - - - 0.996 - - - -
63. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.995 - - - - 0.995 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
64. smarcal1 ENSDARG00000102265 1921 0.995 - - - - 0.995 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
65. ypel3 ENSDARG00000055510 1344 0.995 - - - - 0.995 - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
66. zgc:162816 ENSDARG00000070416 974 0.995 - - - - 0.995 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
67. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.995 - - - - 0.995 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
68. NDST1 NDST1 1584 0.995 - - - - 0.995 - - - -
69. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.995 - - - - 0.995 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
70. zgc:162967 zgc:162967 2132 0.995 - - - - 0.995 - - - -
71. pou4f1 ENSDARG00000005559 821 0.995 - - - - 0.995 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
72. gli2b ENSDARG00000020884 1468 0.995 - - - - 0.995 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
73. KDM5A ENSDARG00000104567 450 0.995 - - - - 0.995 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
74. foxi3a ENSDARG00000055926 749 0.995 - - - - 0.995 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
75. rhbdd2 ENSDARG00000092463 937 0.995 - - - - 0.995 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
76. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.995 - - - - 0.995 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
77. mutyh 512 0.995 - - - - 0.995 - - - - mutY DNA glycosylase
78. ABTB2 ABTB2 584 0.994 - - - - 0.994 - - - -
79. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.994 - - - - 0.994 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
80. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.994 - - - - 0.994 - - - -
81. dnajb12a ENSDARG00000039363 1072 0.994 - - - - 0.994 - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
82. tmem223 ENSDARG00000069494 1528 0.994 - - - - 0.994 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
83. zfyve21 ENSDARG00000027887 1687 0.994 - - - - 0.994 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
84. CR954963.1 ENSDARG00000097153 1135 0.994 - - - - 0.994 - - - -
85. marveld1 ENSDARG00000011724 1025 0.994 - - - - 0.994 - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
86. noc4l ENSDARG00000045565 1337 0.994 - - - - 0.994 - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
87. emid1 ENSDARG00000076119 862 0.994 - - - - 0.994 - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
88. kctd9 kctd9 973 0.994 - - - - 0.994 - - - -
89. ccdc19 ccdc19 495 0.994 - - - - 0.994 - - - -
90. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.994 - - - - 0.994 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
91. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.994 - - - - 0.994 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
92. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.994 - - - - 0.994 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
93. cks1b ENSDARG00000007971 2739 0.994 - - - - 0.994 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
94. zgc:113333 ENSDARG00000038242 797 0.993 - - - - 0.993 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
95. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.993 - - - - 0.993 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
96. azi1_1 azi1_1 1375 0.993 - - - - 0.993 - - - -
97. tsc2 ENSDARG00000103125 1403 0.993 - - - - 0.993 - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
98. rqcd1 2301 0.993 - - - - 0.993 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
99. znf609 znf609 1049 0.993 - - - - 0.993 - - - -
100. nkain1 ENSDARG00000006859 1961 0.993 - - - - 0.993 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]

There are 1069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA