Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prnprs3

Gene Name Gene ID Reads Annotation
prnprs3 ENSDARG00000003705 1854 prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]










Genes with expression patterns similar to prnprs3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prnprs3 ENSDARG00000003705 1854 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
2. wu:fb17g07 wu:fb17g07 10567 3.345 0.785 - - - - 0.860 0.820 0.880 -
3. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 3.053 0.806 0.714 - - - 0.751 0.782 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
4. pak2b ENSDARG00000018476 4331 3 - 0.792 - - 0.702 0.759 0.747 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
5. znf865 ENSDARG00000036698 15532 2.46 - 0.805 - - - 0.809 0.846 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
6. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.454 - - - - 0.791 0.718 - 0.945 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
7. hn1b hn1b 7325 2.404 0.798 0.785 - - - - 0.821 - -
8. apex1 ENSDARG00000045843 6345 2.334 0.729 - - - - 0.802 0.803 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
9. wasf3 wasf3 3287 2.305 0.709 - - - 0.737 0.859 - - -
10. hsp90aa1.2 ENSDARG00000024746 5210 2.295 - - - - 0.773 0.790 0.732 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
11. ANKRD11 ENSDARG00000051886 10024 2.285 0.801 - - - - 0.770 0.714 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
12. lypla2 ENSDARG00000053656 8971 2.285 - 0.769 - - - 0.738 0.778 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
13. rbm25 rbm25 3629 2.282 - 0.716 - - - 0.807 0.759 - -
14. tmsb ENSDARG00000054911 6411 2.279 0.769 - - - - 0.806 0.704 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
15. dbn1 ENSDARG00000069113 4527 2.261 0.722 - - - - 0.803 0.736 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
16. plcg1 ENSDARG00000038442 5324 2.251 0.721 - - - - 0.757 0.773 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
17. mrps2 ENSDARG00000103198 2410 2.237 - - - 0.714 - 0.727 0.796 - - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
18. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.225 0.714 0.765 - - - 0.746 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
19. rtf1 ENSDARG00000008947 6596 2.221 0.713 - - - 0.732 - - 0.776 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
20. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.169 0.718 0.717 - - - - 0.734 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
21. puf60a ENSDARG00000032175 5618 1.739 - - - - - - 0.789 0.950 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
22. E2F3 ENSDARG00000070463 799 1.722 - - - - - 0.767 - 0.955 - E2F transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-070112-882]
23. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.717 - - - - - - 0.764 0.953 - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
24. necap2 ENSDARG00000046002 4372 1.689 - - - - 0.754 - - 0.935 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
25. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.688 - 0.767 - - - - - 0.921 - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
26. rps27.2_1 ENSDARG00000055475 2786 1.688 - - - - 0.745 - - 0.943 - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
27. nf2b ENSDARG00000025567 1441 1.686 - - - - - 0.727 - 0.959 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
28. PIK3CA_1 PIK3CA_1 4065 1.682 - - - - 0.772 - - 0.910 -
29. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.68 - - - - - - 0.741 0.939 - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
30. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.677 - - - - - 0.769 - 0.908 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
31. hoxb10a ENSDARG00000011579 2135 1.675 0.850 0.825 - - - - - - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
32. prmt1 ENSDARG00000010246 11311 1.669 0.829 - - - - 0.840 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
33. hs2st1a ENSDARG00000099478 864 1.66 - - - - - - 0.714 0.946 - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
34. fkbp8 ENSDARG00000001734 1709 1.658 - 0.712 - - - - - 0.946 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
35. snx27b ENSDARG00000016977 2768 1.652 - - - - - - 0.702 0.950 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
36. sod2 ENSDARG00000042644 1382 1.644 - - - - - - 0.778 0.866 - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
37. arhgap12b ENSDARG00000026482, ENSDARG00000109973 1142 1.636 - - - - - - 0.705 0.931 - Rho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
38. lfng ENSDARG00000037879 11783 1.631 - - - - - 0.792 - 0.839 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
39. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.63 - - - - - 0.738 - 0.892 - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
40. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 1.629 - - - - - 0.881 0.748 - - nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
41. pl10 pl10 10795 1.628 - - - - - 0.912 0.716 - -
42. tuba8l3 ENSDARG00000070155 7525 1.625 0.802 - - - - 0.823 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
43. FP016176.1 FP016176.1 7030 1.622 - 0.751 - - - - - 0.871 -
44. syncripl ENSDARG00000026723 3889 1.615 - - - - - - 0.701 0.914 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
45. atp5j 4272 1.614 - - - - - - 0.748 0.866 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
46. lgmn ENSDARG00000039150 2788 1.612 - - - - - - 0.806 0.806 - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
47. smarca5 ENSDARG00000052348 15433 1.612 - - - - - 0.735 - 0.877 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
48. TNPO2 ENSDARG00000042887 2290 1.61 - - - - 0.741 - - 0.869 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
49. creb1a ENSDARG00000053586 5068 1.609 - - - - - 0.783 - 0.826 - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
50. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.604 0.715 - - - - - - 0.889 - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
51. si:ch211-198b3.1 si:ch211-198b3.1 765 1.6 - - - - 0.738 - 0.862 - -
52. igfbp5b ENSDARG00000025348 3803 1.598 - 0.701 - - - - - 0.897 - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
53. vdac1 ENSDARG00000045132 8051 1.597 - - - - - 0.859 0.738 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
54. atf7ip ENSDARG00000069619 5495 1.589 0.856 - - - - - 0.733 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
55. hoxc8a ENSDARG00000070346 4252 1.586 - - - - - - 0.742 0.844 - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
56. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.578 0.774 0.804 - - - - - - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
57. CABZ01072954.1 CABZ01072954.1 2330 1.574 - - - - - 0.763 0.811 - -
58. drg1 ENSDARG00000039345 7545 1.571 - - - - - 0.805 0.766 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
59. pou3f3a ENSDARG00000042032 2835 1.57 0.752 - - - - 0.818 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
60. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.565 - - - - - 0.787 0.778 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
61. rac1 rac1 7341 1.565 - - - - - - 0.743 0.822 -
62. smc1al ENSDARG00000058203 8838 1.564 0.770 - - - - 0.794 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
63. GABARAP GABARAP 8341 1.564 - 0.761 - - - 0.803 - - -
64. snrpd3l ENSDARG00000076283 7655 1.562 - - - - - 0.734 0.828 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
65. tcf7l1b ENSDARG00000007369 2785 1.557 - - - - - 0.788 0.769 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
66. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.556 0.785 - - - - - 0.771 - -
67. hmgb3a ENSDARG00000056725 15668 1.555 0.760 - - - - 0.795 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
68. cyc1 ENSDARG00000038075 16699 1.555 - - - - - 0.742 - 0.813 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
69. rad21a ENSDARG00000006092 393 1.552 0.721 - - - - 0.831 - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
70. dhx38 ENSDARG00000100013 1854 1.548 - 0.758 - - - - 0.790 - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
71. smarce1 ENSDARG00000016871 9628 1.547 - - - - - 0.825 0.722 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
72. ndrg3a ENSDARG00000013087 5581 1.544 0.750 - - - - - 0.794 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
73. si:dkey-226l10.6 ENSDARG00000087483 1651 1.542 - 0.841 - - 0.701 - - - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
74. gas1b ENSDARG00000067984 1748 1.54 - - - - - 0.784 0.756 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
75. sult6b1 ENSDARG00000086826 2070 1.539 - 0.726 - - 0.813 - - - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
76. mllt10 ENSDARG00000045401 7557 1.538 0.790 - - - - 0.748 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
77. cd99l2 ENSDARG00000056722 5036 1.538 0.766 - - - - 0.772 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
78. JPH3 ENSDARG00000102204 283 1.538 - - - - 0.829 0.709 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
79. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.536 - - - - - 0.813 0.723 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
80. tufm ENSDARG00000104173 9292 1.536 0.808 - - - - - 0.728 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
81. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 1.536 - - - - - 0.805 0.731 - - SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
82. nucks1a ENSDARG00000078473 28285 1.536 - 0.713 - - - 0.823 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
83. uba1 ENSDARG00000037559 11579 1.535 0.772 - - - - 0.763 - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
84. sars ENSDARG00000008237 3330 1.533 - 0.726 - - - - - 0.807 - seryl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040831-1]
85. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.533 - - - - 0.734 - 0.799 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
86. myoc ENSDARG00000021789 1631 1.529 - - - - - 0.713 - 0.816 - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
87. npr1a ENSDARG00000031751 517 1.529 - - - - - 0.705 0.824 - - natriuretic peptide receptor 1a [Source:ZFIN;Acc:ZDB-GENE-060503-539]
88. mapk3 ENSDARG00000070573 6842 1.527 - 0.785 - - 0.742 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
89. tmtc2 tmtc2 798 1.522 - - - - 0.751 0.771 - - -
90. nova2 ENSDARG00000017673 7685 1.519 - - - - - 0.724 - 0.795 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
91. mrpl54 ENSDARG00000071468 2715 1.519 - - - - 0.800 - 0.719 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
92. prkar1aa ENSDARG00000076128 6565 1.518 - - - - 0.723 - - 0.795 - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
93. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.514 - - - - - 0.741 0.773 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
94. nkain1 ENSDARG00000006859 1961 1.512 - - - - - 0.786 0.726 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
95. amer2 ENSDARG00000075222 594 1.508 - - - - 0.802 0.706 - - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
96. phax ENSDARG00000044298 2302 1.506 - - - - 0.751 0.755 - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
97. ddx39ab ENSDARG00000015111 11619 1.506 0.713 - - - - - 0.793 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
98. ctbp2 ctbp2 3255 1.505 - - - - - 0.776 0.729 - -
99. anp32e ENSDARG00000054804 11017 1.504 0.802 0.702 - - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
100. coe2 coe2 1633 1.504 - - - - - 0.798 0.706 - -

There are 1549 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA