Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prkrip1

Gene Name Gene ID Reads Annotation
prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]










Genes with expression patterns similar to prkrip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
2. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 2.691 - - - 0.998 - - 0.757 - 0.936 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
3. enpp5 ENSDARG00000070625 550 2.226 0.752 0.769 0.705 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
4. si:dkey-156k2.6 si:dkey-156k2.6 848 1.918 - - - 0.999 - - - - 0.919
5. fam102bb ENSDARG00000002333 1483 1.869 - - - 0.997 - - - - 0.872 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
6. tox4 tox4 1671 1.862 - - - 0.995 - - - - 0.867
7. pknox1.1 ENSDARG00000018765 2149 1.849 - - - 0.958 - - - - 0.891 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
8. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.818 - - - 0.969 - - - - 0.849 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
9. mcrs1 ENSDARG00000020840 3232 1.816 - - - 0.997 - - - - 0.819 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
10. polr1a ENSDARG00000098375 1224 1.801 - 0.805 - 0.996 - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
11. celf3a ENSDARG00000034668 2432 1.8 - 0.811 - 0.989 - - - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
12. ncalda ENSDARG00000070688 5069 1.793 - - - 0.983 - - - - 0.810 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
13. emc3 ENSDARG00000020607 3406 1.79 - - - 0.986 - - - - 0.804 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
14. cdc34b ENSDARG00000012627 3879 1.785 - - - 0.977 - - - - 0.808 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
15. zic4 ENSDARG00000031307 1228 1.762 - 0.767 - 0.995 - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
16. CABZ01070258.1 ENSDARG00000105687 3643 1.758 - 0.774 - 0.984 - - - - -
17. trdn ENSDARG00000041779 4283 1.748 - 0.759 - 0.989 - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
18. KDM6B KDM6B 10265 1.74 - - - 0.950 - - - - 0.790
19. nmt1a ENSDARG00000052966 5918 1.735 - 0.753 - 0.982 - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
20. zgc:173548 ENSDARG00000070048 558 1.733 - - - - - - 0.808 - 0.925 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
21. lysmd3 ENSDARG00000024693 754 1.732 - - - - - - 0.862 - 0.870 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
22. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1.722 - - - 0.999 - 0.723 - - -
23. brd7 ENSDARG00000008380 3654 1.721 - 0.732 - 0.989 - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
24. chga ENSDARG00000008829 1086 1.717 0.719 - - 0.998 - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
25. txlnbb ENSDARG00000076241 6396 1.706 - 0.823 - 0.883 - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
26. polr3e ENSDARG00000037358 1864 1.704 - - - 0.995 - - - 0.709 - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
27. ZNF518B 475 1.703 - - 0.776 - - - - - 0.927 zinc finger protein 518B
28. rbm42 ENSDARG00000039910 1111 1.702 - - - - - - 0.800 - 0.902 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
29. st8sia5 ENSDARG00000036584 529 1.701 0.764 - - - - - - - 0.937 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
30. sirt6 ENSDARG00000102963 766 1.701 - 0.704 - 0.997 - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
31. sh3bp5lb 1090 1.7 - 0.703 - 0.997 - - - - - SH3-binding domain protein 5-like, b
32. dvl1b ENSDARG00000055552 146 1.699 - - - - - - 0.782 - 0.917 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
33. slc16a8 ENSDARG00000045153 478 1.695 - - - - - - 0.788 - 0.907 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
34. ngly1 ENSDARG00000003205 733 1.694 - - - - - - 0.772 - 0.922 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
35. fzr1 fzr1 2984 1.694 - 0.701 - 0.993 - - - - -
36. sepw2a 8597 1.692 0.717 - - 0.975 - - - - - selenoprotein W, 2a
37. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.685 0.813 - - - - - - - 0.872 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
38. RNPEPL1 ENSDARG00000007813 557 1.679 - - - - - - 0.789 - 0.890 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
39. nsun2 ENSDARG00000056665 740 1.675 - - - - - - 0.756 - 0.919 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
40. PHB2 PHB2 3755 1.669 - 0.835 - - - - - - 0.834
41. ptn ENSDARG00000102340 229 1.669 - - 0.737 - - - - - 0.932 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
42. HDX ENSDARG00000079382 513 1.667 - 0.728 - - - - - - 0.939 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
43. SPIN4_1 SPIN4_1 2562 1.666 - - - - - - 0.815 - 0.851
44. pes ENSDARG00000018902 3286 1.666 - 0.815 - - - - - - 0.851 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
45. lsm1 ENSDARG00000043177 767 1.663 - - 0.748 - - - - - 0.915 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
46. mrps18b ENSDARG00000007065 2121 1.662 - 0.764 - - - - - - 0.898 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
47. prmt6 ENSDARG00000069706 484 1.66 - - - - 0.740 - - - 0.920 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
48. rnf41l ENSDARG00000073918 329 1.656 - 0.795 - - - - 0.861 - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
49. timm8b ENSDARG00000055708 7291 1.654 - 0.705 - 0.949 - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
50. xpr1 xpr1 840 1.648 - 0.799 - - - - - - 0.849
51. st8sia2 ENSDARG00000018788 2183 1.642 - - 0.715 - - - - - 0.927 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
52. CR678040.1 CR678040.1 117 1.635 - - - - 0.705 - - - 0.930
53. abca1a ENSDARG00000074635 1085 1.63 - - - - - 0.730 - - 0.900 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
54. ttc21b ENSDARG00000012368 229 1.629 - 0.708 - - - - - - 0.921 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
55. SNAP91 ENSDARG00000098809 556 1.626 - 0.701 - - - - - - 0.925 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
56. kank2 ENSDARG00000018393 1804 1.618 - 0.772 - - - - - - 0.846 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
57. ptprsb 1085 1.618 - 0.768 - - - - - - 0.850 protein tyrosine phosphatase, receptor type, s, b
58. lnpep ENSDARG00000100394 1436 1.613 - 0.715 - - - - - - 0.898 leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
59. ndufa6 ENSDARG00000038028 2653 1.61 - 0.781 - - - - - - 0.829 NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
60. als2b ENSDARG00000076924 738 1.594 - - - - - 0.708 - - 0.886 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
61. suv420h1 1810 1.592 - 0.756 - - - - - - 0.836 suppressor of variegation 4-20 homolog 1 (Drosophila)
62. fitm1 ENSDARG00000056464 1759 1.582 - 0.837 - - - 0.745 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
63. irs4a ENSDARG00000086551 346 1.569 0.737 0.832 - - - - - - - insulin receptor substrate 4a [Source:ZFIN;Acc:ZDB-GENE-120215-92]
64. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.569 0.840 - 0.729 - - - - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
65. angptl4 ENSDARG00000035859 2701 1.558 - - 0.744 - - - - - 0.814 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
66. u2af2b ENSDARG00000011740 6946 1.556 - - - - - 0.732 - - 0.824 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
67. dnajc19 ENSDARG00000044420 1756 1.551 - 0.723 - - - - - - 0.828 DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
68. brd3a ENSDARG00000006527 1636 1.551 - - - - - - - 0.707 0.844 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
69. six1a ENSDARG00000039304 1183 1.55 - 0.775 - - - 0.775 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
70. ebf3 ebf3 4238 1.545 - 0.839 - - - - - - 0.706
71. pomp ENSDARG00000032296 4439 1.545 - 0.790 - - - - - - 0.755 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
72. CHL1 CHL1 1553 1.542 - 0.736 - - - - - - 0.806
73. qrsl1 ENSDARG00000032704 200 1.538 0.701 0.837 - - - - - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
74. hmp19 2554 1.534 0.738 - 0.796 - - - - - - HMP19 protein
75. jag1a ENSDARG00000030289 1275 1.531 0.790 0.741 - - - - - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
76. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.529 - 0.724 - 0.805 - - - - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
77. irx1b ENSDARG00000056594 2224 1.52 0.727 - - - - - - - 0.793 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
78. CASK CASK 1750 1.517 0.705 - - - - - - - 0.812
79. mef2d ENSDARG00000040237 6144 1.508 - 0.751 - - - 0.757 - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
80. CABZ01111990.1 CABZ01111990.1 4374 1.502 - 0.792 - - - - - - 0.710
81. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.5 - - - - - 0.716 - - 0.784 ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
82. npas3b npas3b 1446 1.498 0.740 - - - - - - - 0.758
83. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.492 0.708 - - - - - - - 0.784 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
84. alg12 ENSDARG00000041199, ENSDARG00000111299 365 1.48 - - 0.745 - - 0.735 - - - ALG12, alpha-1,6-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-041210-295]
85. nckap1 ENSDARG00000060853 3540 1.48 - - 0.774 - - - - - 0.706 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
86. acrc 242 1.475 0.727 0.748 - - - - - - - acidic repeat containing, transcript variant X3
87. hspe1 ENSDARG00000056167 21636 1.472 - - - 0.725 - - - - 0.747 heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
88. rtn2b ENSDARG00000057027 1391 1.469 - 0.717 - - - 0.752 - - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
89. hoxc4a ENSDARG00000070338 1382 1.461 0.724 0.737 - - - - - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
90. mtss1l mtss1l 2494 1.455 0.739 - - - - - - - 0.716
91. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 1.434 - 0.724 - - 0.710 - - - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
92. slbp ENSDARG00000100558 3405 1.434 0.733 - - - - - - - 0.701 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
93. cct8 ENSDARG00000008243 6843 1.428 - 0.712 - - - 0.716 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
94. vsnl1a ENSDARG00000023228 1584 1.416 0.714 0.702 - - - - - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
95. dido1 ENSDARG00000057940 3819 1.413 - - - - - 0.701 - - 0.712 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
96. snx18a ENSDARG00000067713, ENSDARG00000109647 765 0.999 - - - 0.999 - - - - - sorting nexin 18a [Source:ZFIN;Acc:ZDB-GENE-070705-339]
97. lrrtm1 ENSDARG00000052713 1041 0.999 - - - 0.999 - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
98. SNORA2 SNORA2 486 0.999 - - - 0.999 - - - - -
99. AL954698.1 ENSDARG00000098202 377 0.999 - - - 0.999 - - - - -
100. zgc:173702 ENSDARG00000110229 411 0.999 - - - 0.999 - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]

There are 1723 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA