Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prim1

Gene Name Gene ID Reads Annotation
prim1 ENSDARG00000040163 909 DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]










Genes with expression patterns similar to prim1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prim1 ENSDARG00000040163 909 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
2. srrm2 ENSDARG00000037965 1967 2.498 0.701 - - 0.813 - - 0.984 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
3. ik ENSDARG00000004161 3132 1.833 - - - 0.853 - - 0.980 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
4. smc5 ENSDARG00000044282 779 1.797 - 0.802 - - - - 0.995 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
5. supt4h1 ENSDARG00000113969 1024 1.797 - - - 0.832 - - 0.965 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
6. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.778 - - - 0.785 - - 0.993 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
7. eftud2 ENSDARG00000012261 3081 1.777 - 0.791 - - - - 0.986 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
8. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.776 - - - 0.798 - - 0.978 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
9. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.753 - - - 0.813 - - 0.940 - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
10. AL844567.1 AL844567.1 1605 1.726 - - - - - - 0.993 - 0.733
11. papolg ENSDARG00000012141 1445 1.722 - - - - - - 0.994 0.728 - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
12. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.722 - - - 0.776 - - 0.946 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
13. TAF2 ENSDARG00000102307 1401 1.721 - - - 0.757 - - 0.964 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
14. cadm1a ENSDARG00000031075 2484 1.719 - - - 0.767 - - 0.952 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
15. ccdc102a ENSDARG00000003872 791 1.717 - 0.730 - - - - 0.987 - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
16. med27 ENSDARG00000009681 1857 1.717 0.774 - - - - - 0.943 - - mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
17. fbxo30a ENSDARG00000058561 867 1.711 - 0.716 - - - - 0.995 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
18. rpl7a ENSDARG00000019230 1204 1.71 - 0.734 - - - - 0.976 - - ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]
19. CU929431.1 CU929431.1 2234 1.708 - 0.727 - - - - 0.981 - -
20. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.704 - - - 0.720 - - 0.984 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
21. wdr82 ENSDARG00000014083 3159 1.7 - 0.728 - - - - 0.972 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
22. lzic ENSDARG00000055899 638 1.698 - - - 0.706 - - 0.992 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
23. kansl3 ENSDARG00000029556 2487 1.695 - - - 0.706 - - 0.989 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
24. trappc13 ENSDARG00000033768 1311 1.693 - 0.707 - - - - 0.986 - - trafficking protein particle complex 13 [Source:ZFIN;Acc:ZDB-GENE-030131-9775]
25. ncapg2 ENSDARG00000060023 993 1.691 - - - 0.714 - - 0.977 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
26. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.69 0.721 - - - - - 0.969 - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
27. eny2 ENSDARG00000070046 3741 1.668 - - - - - - 0.964 - 0.704 enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
28. cdkn2aipnl ENSDARG00000053395 5107 1.652 - 0.710 - - - - 0.942 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
29. abcg2c ENSDARG00000058574 1261 1.594 - 0.801 - 0.793 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
30. clvs2 ENSDARG00000053122 1390 1.574 - - - 0.796 - - - - 0.778 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
31. prpf8 ENSDARG00000026180 7026 1.554 - 0.726 - 0.828 - - - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
32. adnpb ENSDARG00000074293 796 1.554 0.717 0.837 - - - - - - - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
33. pex16 ENSDARG00000058202 486 1.531 - - - 0.774 0.757 - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
34. LANCL2 ENSDARG00000045465 1221 1.516 - 0.712 - 0.804 - - - - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
35. marcksa ENSDARG00000004049 2518 1.483 - - - 0.782 - - - - 0.701 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
36. supt20 ENSDARG00000078658 713 1.465 0.725 - - 0.740 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
37. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.462 - - - 0.727 - - - - 0.735 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
38. GPN1 ENSDARG00000043928 566 1.449 - 0.702 - 0.747 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
39. gnav1 ENSDARG00000043006 305 1.441 - 0.717 - 0.724 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
40. vezf1b ENSDARG00000061030 1410 1.437 - - - 0.703 - - - - 0.734 vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
41. znf395b ENSDARG00000024195 342 1.434 - 0.713 - 0.721 - - - - - zinc finger protein 395b [Source:ZFIN;Acc:ZDB-GENE-041001-193]
42. mctp2a ENSDARG00000001414 307 1.43 0.714 - - 0.716 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
43. nsl1 ENSDARG00000024471 1269 1.426 - 0.723 - - - 0.703 - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
44. psmf1 ENSDARG00000022652 527 1.426 - 0.701 - 0.725 - - - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
45. RNASEH2C ENSDARG00000089637 1673 1.421 - - 0.714 0.707 - - - - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
46. tmem203 ENSDARG00000104996 1182 0.996 - - - - - - 0.996 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
47. plxna4 ENSDARG00000019328 782 0.996 - - - - - - 0.996 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
48. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.996 - - - - - - 0.996 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
49. irf8 ENSDARG00000056407 85 0.996 - - - - - - 0.996 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
50. tmco3 ENSDARG00000075108 368 0.996 - - - - - - 0.996 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
51. FBXO31 ENSDARG00000062195 753 0.996 - - - - - - 0.996 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
52. mpdu1b ENSDARG00000040265 1968 0.996 - - - - - - 0.996 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
53. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.996 - - - - - - 0.996 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
54. asb6 ENSDARG00000007125 389 0.996 - - - - - - 0.996 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
55. zgc:153372 ENSDARG00000068967 358 0.995 - - - - - - 0.995 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
56. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.995 - - - - - - 0.995 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
57. BX324179.3 BX324179.3 326 0.995 - - - - - - 0.995 - -
58. CABZ01068263.1 CABZ01068263.1 712 0.995 - - - - - - 0.995 - -
59. cul1b ENSDARG00000007691 719 0.995 - - - - - - 0.995 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
60. PSD PSD 367 0.995 - - - - - - 0.995 - -
61. lppr4a lppr4a 141 0.995 - - - - - - 0.995 - -
62. dennd5b ENSDARG00000003789 1152 0.995 - - - - - - 0.995 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
63. sult3st1 ENSDARG00000009885 218 0.995 - - - - - - 0.995 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
64. PRR5 PRR5 630 0.995 - - - - - - 0.995 - -
65. unk ENSDARG00000000935 353 0.995 - - - - - - 0.995 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
66. agk ENSDARG00000009837, ENSDARG00000113514 811 0.995 - - - - - - 0.995 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
67. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.995 - - - - - - 0.995 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
68. igfbp3 ENSDARG00000099144 269 0.995 - - - - - - 0.995 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
69. TMEM184B TMEM184B 1280 0.995 - - - - - - 0.995 - -
70. dhodh ENSDARG00000051889 401 0.995 - - - - - - 0.995 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
71. si:ch211-51o18.2 si:ch211-51o18.2 111 0.995 - - - - - - 0.995 - -
72. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.995 - - - - - - 0.995 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
73. si:ch73-108h4.3 si:ch73-108h4.3 193 0.995 - - - - - - 0.995 - -
74. prdm5 ENSDARG00000006288 472 0.995 - - - - - - 0.995 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
75. gli1 ENSDARG00000101244 534 0.995 - - - - - - 0.995 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
76. baz2a ENSDARG00000102974 266 0.995 - - - - - - 0.995 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
77. plekhh1 ENSDARG00000053835 2123 0.995 - - - - - - 0.995 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
78. si:ch211-198d23.1 ENSDARG00000092574 104 0.995 - - - - - - 0.995 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
79. armc1l ENSDARG00000020887 1219 0.995 - - - - - - 0.995 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
80. PLXNB2 PLXNB2 99 0.995 - - - - - - 0.995 - -
81. asb3 ENSDARG00000005246 317 0.995 - - - - - - 0.995 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
82. bin2b ENSDARG00000010255 2649 0.995 - - - - - - 0.995 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
83. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.995 - - - - - - 0.995 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
84. kbtbd7 ENSDARG00000078001 367 0.995 - - - - - - 0.995 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
85. socs3a ENSDARG00000025428 349 0.995 - - - - - - 0.995 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
86. SLITRK6 ENSDARG00000098769 217 0.995 - - - - - - 0.995 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
87. illr4 ENSDARG00000008075 164 0.994 - - - - - - 0.994 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
88. PHYKPL ENSDARG00000040566 435 0.994 - - - - - - 0.994 - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-051127-33]
89. CAPN5 CAPN5 357 0.994 - - - - - - 0.994 - -
90. zgc:173962 zgc:173962 67 0.994 - - - - - - 0.994 - -
91. nhp2l1a nhp2l1a 993 0.994 - - - - - - 0.994 - -
92. PRKD3 ENSDARG00000079967 192 0.994 - - - - - - 0.994 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
93. zgc:162612 ENSDARG00000079699 244 0.994 - - - - - - 0.994 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
94. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.994 - - - - - - 0.994 - -
95. ZNF337_10 ZNF337_10 183 0.994 - - - - - - 0.994 - -
96. znf687a ENSDARG00000102774 393 0.994 - - - - - - 0.994 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
97. gnsb ENSDARG00000098296 1075 0.994 - - - - - - 0.994 - - glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [Source:ZFIN;Acc:ZDB-GENE-030131-5846]
98. ICT1 356 0.994 - - - - - - 0.994 - - immature colon carcinoma transcript 1
99. dnajb9a ENSDARG00000052072 578 0.994 - - - - - - 0.994 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
100. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.994 - - - - - - 0.994 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]

There are 1067 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA