Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prex1

Gene Name Gene ID Reads Annotation
prex1 ENSDARG00000075793 1017 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]










Genes with expression patterns similar to prex1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prex1 ENSDARG00000075793 1017 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
2. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.682 - 0.856 - - - 0.826 - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
3. zgc:158296 ENSDARG00000070923 3935 1.678 - 0.827 - - - 0.851 - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
4. EHBP1L1 EHBP1L1 2500 1.653 - 0.761 - - - 0.892 - - -
5. CU457815.1 ENSDARG00000115823 1005 1.643 - 0.753 - - - 0.890 - - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
6. six1a ENSDARG00000039304 1183 1.642 - 0.776 - - - 0.866 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
7. FRMD5 ENSDARG00000075942 569 1.604 - 0.827 - - - 0.777 - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
8. mef2aa ENSDARG00000031756 2699 1.6 - 0.758 - - - 0.842 - - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
9. efnb3b ENSDARG00000042277 5823 1.599 - 0.852 - - - - 0.747 - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
10. ryr3 ENSDARG00000071331 6795 1.598 - 0.850 - - - 0.748 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
11. MRPS12_1 MRPS12_1 2714 1.584 - - - - - 0.871 0.713 - -
12. txlnbb ENSDARG00000076241 6396 1.579 - 0.775 - - - 0.804 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
13. alpk2 ENSDARG00000079637 1483 1.577 - 0.702 - - - 0.875 - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
14. musk ENSDARG00000098764 438 1.559 - 0.846 - - - 0.713 - - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
15. rnf175 ENSDARG00000037647 1233 1.556 - - - - - 0.792 0.764 - - ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
16. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.552 - 0.752 - - - 0.800 - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
17. epb41b ENSDARG00000029019 1472 1.551 - 0.711 - - - 0.840 - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
18. pdhx ENSDARG00000051756 924 1.549 - 0.826 - - - - 0.723 - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
19. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.548 - 0.751 - - - 0.797 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
20. mrpl9 ENSDARG00000063249 783 1.545 - 0.839 - - - - 0.706 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
21. UTP14A UTP14A 1471 1.539 - 0.765 - - - 0.774 - - -
22. stac3 ENSDARG00000098883 1765 1.534 - 0.792 - - - 0.742 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
23. MYOM3 2720 1.528 - 0.825 - - - 0.703 - - - myomesin 3, transcript variant X2
24. fitm1 ENSDARG00000056464 1759 1.527 - 0.702 - - - 0.825 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
25. zgc:86609 ENSDARG00000029479 923 1.524 - 0.723 - - - 0.801 - - - zgc:86609 [Source:ZFIN;Acc:ZDB-GENE-050102-7]
26. sptb ENSDARG00000030490 7128 1.519 - 0.720 - - - 0.799 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
27. si:ch211-28p3.4 ENSDARG00000091009 280 1.519 - 0.806 - - - - 0.713 - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
28. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.513 - 0.801 - - - - 0.712 - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
29. hsd17b10 ENSDARG00000017781 1793 1.511 - 0.791 - - - 0.720 - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
30. spry2 ENSDARG00000078308 1200 1.505 0.784 0.721 - - - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
31. farsa ENSDARG00000098825 2813 1.5 - 0.758 - - - - 0.742 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
32. pax3b ENSDARG00000028348 388 1.498 - 0.774 - - - - 0.724 - - paired box 3b [Source:ZFIN;Acc:ZDB-GENE-080917-53]
33. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.495 - 0.720 - - - 0.775 - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
34. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.493 - 0.721 - - - 0.772 - - -
35. coq2 ENSDARG00000059510 505 1.492 - - - - - 0.780 0.712 - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
36. kcnma1a ENSDARG00000079840 2584 1.486 - 0.755 - - - 0.731 - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
37. trdn ENSDARG00000041779 4283 1.482 - 0.736 - - - 0.746 - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
38. myh7bb ENSDARG00000035322 287 1.475 - 0.744 - - - 0.731 - - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
39. pkn2 ENSDARG00000101983 1211 1.469 - 0.718 - 0.751 - - - - - protein kinase N2 [Source:ZFIN;Acc:ZDB-GENE-061207-42]
40. pomp ENSDARG00000032296 4439 1.457 - 0.738 - - - - 0.719 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
41. krr1 ENSDARG00000011246 1624 1.455 - 0.740 - - - - 0.715 - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
42. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.447 - 0.739 - - - 0.708 - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
43. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.445 - 0.716 - - - - 0.729 - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
44. anp32e ENSDARG00000054804 11017 1.438 - 0.730 - - - - 0.708 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
45. cd99l2 ENSDARG00000056722 5036 1.426 - 0.714 - - - - 0.712 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
46. ptcd3 ENSDARG00000103856 2107 1.426 - - - - - 0.725 0.701 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
47. TNKS TNKS 2775 1.425 0.701 0.724 - - - - - - -
48. pik3c2b ENSDARG00000086927 864 1.407 0.701 0.706 - - - - - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
49. MYOT ENSDARG00000076312 1791 0.905 - 0.905 - - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
50. kcnmb2 ENSDARG00000006568 95 0.888 - - - - - 0.888 - - - potassium large conductance calcium-activated channel, subfamily M, beta member 2 [Source:ZFIN;Acc:ZDB-GENE-050320-97]
51. CBFA2T3 ENSDARG00000079012 6799 0.879 - 0.879 - - - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
52. NPDC1 NPDC1 126 0.873 - - - - - 0.873 - - -
53. git2a ENSDARG00000061915 884 0.868 - 0.868 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
54. ryr1b ENSDARG00000023797 5693 0.868 - 0.868 - - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
55. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.863 - 0.863 - - - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
56. PSMG4 1007 0.862 - 0.862 - - - - - - - proteasome (prosome, macropain) assembly chaperone 4
57. myo16 ENSDARG00000078582 714 0.862 - 0.862 - - - - - - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
58. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.862 - - - - - 0.862 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
59. BX001033.2 BX001033.2 857 0.861 - 0.861 - - - - - - -
60. six1b ENSDARG00000026473 1908 0.861 - 0.861 - - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
61. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 0.858 - 0.858 - - - - - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
62. runx1t1 ENSDARG00000003680 633 0.855 - 0.855 - - - - - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
63. fam46c 1913 0.855 - - - - - 0.855 - - - family with sequence similarity 46, member C
64. si:dkey-51e6.1 ENSDARG00000042133 564 0.855 - - - - - 0.855 - - - si:dkey-51e6.1 [Source:ZFIN;Acc:ZDB-GENE-041014-198]
65. nos1apb ENSDARG00000058701 148 0.853 - - - - - 0.853 - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
66. fam189a2 ENSDARG00000099946 177 0.85 - 0.850 - - - - - - - family with sequence similarity 189, member A2 [Source:ZFIN;Acc:ZDB-GENE-050309-90]
67. vps52 ENSDARG00000099258 780 0.848 - - - - - 0.848 - - - vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-010430-2]
68. lrrc20 ENSDARG00000105018 1970 0.848 - 0.848 - - - - - - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
69. dpf3 ENSDARG00000025309 1376 0.848 - 0.848 - - - - - - - D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
70. TSPAN4 TSPAN4 941 0.847 - 0.847 - - - - - - -
71. dlgap1b ENSDARG00000037415 658 0.844 - 0.844 - - - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
72. tbcelb ENSDARG00000019525 299 0.842 - - - - - 0.842 - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
73. hspb7 ENSDARG00000104441 1417 0.842 - 0.842 - - - - - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
74. trib2 ENSDARG00000068179 616 0.841 - - - - - 0.841 - - - tribbles pseudokinase 2 [Source:ZFIN;Acc:ZDB-GENE-091207-3]
75. myf6 ENSDARG00000029830 1911 0.841 - 0.841 - - - - - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
76. tsr1 ENSDARG00000007744 870 0.838 - - - - - 0.838 - - - TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-3762]
77. hfe2 4113 0.838 - 0.838 - - - - - - - hemochromatosis type 2
78. BX324003.2 ENSDARG00000109802 178 0.838 0.838 - - - - - - - -
79. PITPNC1 ENSDARG00000099260 1096 0.838 - - - - - 0.838 - - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
80. gypc ENSDARG00000041546 1487 0.837 - 0.837 - - - - - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
81. trim55b ENSDARG00000058158 586 0.834 - 0.834 - - - - - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
82. jph1a ENSDARG00000058603 2852 0.834 - - - - - 0.834 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
83. si:ch1073-184j22.2 ENSDARG00000078598 707 0.834 - - - - - 0.834 - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
84. dgkh ENSDARG00000018716 795 0.833 - 0.833 - - - - - - - diacylglycerol kinase, eta [Source:ZFIN;Acc:ZDB-GENE-070912-328]
85. PHB2 PHB2 3755 0.832 - 0.832 - - - - - - -
86. mbd6 ENSDARG00000086980 655 0.83 - 0.830 - - - - - - - methyl-CpG binding domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-041027-3]
87. schip1 ENSDARG00000035175 3838 0.829 - - - - - - 0.829 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
88. zgc:110366 ENSDARG00000004167 314 0.827 - - - - - 0.827 - - - zgc:110366 [Source:ZFIN;Acc:ZDB-GENE-050417-302]
89. tmem47 ENSDARG00000057322 4691 0.826 - 0.826 - - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
90. gas1b ENSDARG00000067984 1748 0.825 - 0.825 - - - - - - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
91. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 0.825 - - - - - - 0.825 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
92. GIN1 GIN1 317 0.825 - 0.825 - - - - - - -
93. FILIP1 339 0.825 - 0.825 - - - - - - - filamin A interacting protein 1
94. hhatla ENSDARG00000039051 6598 0.824 - 0.824 - - - - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
95. C9H2orf15 C9H2orf15 1975 0.823 - - - - - 0.823 - - -
96. AL954372.1 ENSDARG00000112499 589 0.823 0.823 - - - - - - - -
97. kal1b kal1b 495 0.822 - - - - - 0.822 - - -
98. mrpl22 ENSDARG00000109961 1374 0.822 - - - - - - 0.822 - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
99. optc ENSDARG00000014358 1295 0.821 - 0.821 - - - - - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
100. mybphb ENSDARG00000003081 5208 0.821 - 0.821 - - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]

There are 876 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA