Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prdx3

Gene Name Gene ID Reads Annotation
prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]










Genes with expression patterns similar to prdx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
2. si:ch211-156j16.1 ENSDARG00000092035 7441 2.734 - 0.926 - - - 0.967 0.841 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
3. atpif1a 6030 2.719 - 0.924 0.879 - - - 0.916 - - ATPase inhibitory factor 1a
4. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 2.608 - 0.909 - - - 0.922 - - 0.777 pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
5. timm8b ENSDARG00000055708 7291 2.564 - - - - - 0.944 0.897 - 0.723 translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
6. farsa ENSDARG00000098825 2813 2.561 - - - - - 0.961 0.805 0.795 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
7. ube2a ENSDARG00000098466 12765 2.519 - - 0.792 - - 0.846 0.881 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
8. flot2a ENSDARG00000004830 5276 2.467 0.819 0.920 - - - - 0.728 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
9. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 2.447 - - 0.817 - - 0.759 0.871 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
10. ddx49 ENSDARG00000012899 1604 2.428 0.736 - 0.890 - - - 0.802 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
11. erlin1 ENSDARG00000021991 5664 2.419 - 0.846 0.837 - - - 0.736 - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
12. ndufa9 ndufa9 8846 1.889 - - - - - 0.970 0.919 - -
13. psmb7 ENSDARG00000037962 11542 1.875 - - - - - 0.969 0.906 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
14. ncor2 ENSDARG00000000966 3352 1.862 - 0.865 - 0.997 - - - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
15. tpd52l2b ENSDARG00000013655 9460 1.853 - 0.857 - 0.996 - - - - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
16. rnf183 ENSDARG00000068851 2427 1.838 - - 0.888 - - 0.950 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
17. sgcd ENSDARG00000098573 4980 1.837 - - - - - 0.976 0.861 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
18. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.833 - - - - - 0.980 0.853 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
19. ndufs1 ENSDARG00000028546 5795 1.825 - 0.919 - - - - 0.906 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
20. hadhb ENSDARG00000102055 9700 1.824 - - - - - 0.974 0.850 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
21. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 1.823 - - - 0.931 - - 0.892 - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
22. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.814 - - - - - 0.971 0.843 - -
23. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 1.812 - 0.836 - - - 0.976 - - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
24. TMPO TMPO 3264 1.805 - - - - - 0.979 0.826 - -
25. prx ENSDARG00000017246 6183 1.802 - - - - - 0.981 0.821 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
26. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.802 - 0.851 - - - 0.951 - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
27. hnrpdl 14288 1.802 - 0.908 0.894 - - - - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
28. slc25a12 ENSDARG00000102362 2773 1.799 - - - - - 0.971 0.828 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
29. mrpl36 ENSDARG00000070607 4069 1.791 - 0.888 - - - - 0.903 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
30. pfdn4 ENSDARG00000061228 8266 1.79 - 0.895 - - - - 0.895 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
31. MRPL52 ENSDARG00000090568 4402 1.789 - - - - - 0.966 0.823 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
32. Sep-06 Sep-06 5465 1.787 - - - - - 0.965 - 0.822 -
33. efemp2a ENSDARG00000094324 39261 1.786 - - - - - 0.963 0.823 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
34. mt-nd5 ENSDARG00000063921 21268 1.786 - - 0.845 - - - 0.941 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
35. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.784 0.787 - - 0.997 - - - - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
36. fermt2 ENSDARG00000020242 9351 1.78 - 0.903 - - - - 0.877 - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
37. sdhb ENSDARG00000075768 5493 1.779 - 0.898 - - - - 0.881 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
38. MYOM1 MYOM1 3870 1.774 - - - - - 0.980 0.794 - -
39. srl ENSDARG00000104587 11126 1.771 - - - - - 0.980 0.791 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
40. ube2z ENSDARG00000029215 1059 1.77 - - - - - 0.960 - 0.810 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
41. hapln1a ENSDARG00000089769 12334 1.769 - - - - - 0.949 0.820 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
42. ndufb11 ENSDARG00000043467 7495 1.757 - - 0.823 - - - 0.934 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
43. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.751 - 0.918 - - - - 0.833 - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
44. cdc14b ENSDARG00000021483 4958 1.748 - - 0.753 0.995 - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
45. uckl1b ENSDARG00000078973 2237 1.747 - - - 0.997 - - 0.750 - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
46. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.747 - 0.928 - - - - 0.819 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
47. isca1 ENSDARG00000051956 5855 1.736 - 0.868 0.868 - - - - - - iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
48. adss ENSDARG00000002071 5497 1.734 - 0.907 - - - - 0.827 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
49. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.732 - - - 0.997 - - - 0.735 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
50. zgc:195001 ENSDARG00000070484 3281 1.729 - - - - - 0.973 0.756 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
51. SPEG SPEG 4017 1.727 - - - - - 0.978 0.749 - -
52. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.718 - - 0.872 - - - - 0.846 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
53. rap2c ENSDARG00000015649 4709 1.718 - 0.923 - - - - 0.795 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
54. ppp2r5eb ENSDARG00000069118 1902 1.717 - - - - - 0.961 0.756 - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
55. gyg1a ENSDARG00000011934 2276 1.714 - 0.883 - - - - 0.831 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
56. atp5e 14858 1.712 - - - - - - 0.941 - 0.771 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
57. l2hgdh ENSDARG00000060500 713 1.71 - - - - - 0.962 0.748 - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
58. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.71 - - - 0.873 - - 0.837 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
59. lama2 ENSDARG00000099390 24734 1.709 - - - 0.993 - - 0.716 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
60. aqr ENSDARG00000016775 1581 1.706 - 0.824 0.882 - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
61. rab5c ENSDARG00000026712 4733 1.706 - 0.812 0.894 - - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
62. calm1b ENSDARG00000034187 13158 1.705 - - - 0.992 - - - 0.713 - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
63. eif5a2 ENSDARG00000056186 43804 1.704 - 0.773 - - - 0.931 - - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
64. unc45b ENSDARG00000008433 8298 1.704 - 0.877 - - - - 0.827 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
65. fbxw5 ENSDARG00000099139 2802 1.704 - - - - - 0.968 0.736 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
66. emp2 ENSDARG00000044588 12560 1.702 - - - - - 0.968 0.734 - - epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
67. pinx1 ENSDARG00000023532 4452 1.7 - - 0.914 - - - - 0.786 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
68. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.7 - - - - - 0.973 0.727 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
69. zgc:193541 ENSDARG00000092873 21276 1.699 - - - - - - 0.947 - 0.752 zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
70. im:7136729 im:7136729 1625 1.698 - 0.814 0.884 - - - - - -
71. sf3a3 ENSDARG00000100114 4511 1.693 - - 0.860 - - - 0.833 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
72. mrpl11 ENSDARG00000013075 2927 1.692 - - 0.906 - - - 0.786 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
73. dennd5a ENSDARG00000017006 3426 1.692 - - 0.890 - - - - 0.802 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
74. cttnbp2 ENSDARG00000040991 1697 1.689 - 0.855 - - - - 0.834 - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
75. mdh2 ENSDARG00000043371 14485 1.688 - - - - - - 0.934 - 0.754 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
76. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.683 - - 0.886 - - - - 0.797 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
77. prr12a ENSDARG00000074229 1668 1.681 - 0.821 0.860 - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
78. nudt3a ENSDARG00000016256 2713 1.68 - - 0.897 - - - 0.783 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
79. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.678 - - - - - 0.970 - 0.708 - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
80. KIAA0355 3250 1.677 - - 0.885 - - - 0.792 - - KIAA0355 ortholog, transcript variant X1
81. nxf1 ENSDARG00000055076 3251 1.677 - - 0.893 - - - 0.784 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
82. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.675 0.775 - - - - - 0.900 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
83. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.67 - - 0.890 - - - 0.780 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
84. atf4b2 atf4b2 4734 1.666 - 0.864 - - - - - 0.802 -
85. hypk ENSDARG00000059725 20584 1.664 - - 0.731 - - - 0.933 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
86. pbx4 ENSDARG00000052150 35676 1.663 - - - 0.779 - 0.884 - - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
87. cyc1 ENSDARG00000038075 16699 1.662 - - 0.852 - - - 0.810 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
88. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.661 0.762 - - - - - 0.899 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
89. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.661 - 0.864 - - - - 0.797 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
90. ehd3 ENSDARG00000007869 3238 1.66 0.752 0.908 - - - - - - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
91. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.66 - - - - - - 0.950 - 0.710 coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
92. rplp2 ENSDARG00000101406 77670 1.659 - - - 0.948 - 0.711 - - - ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
93. esd ENSDARG00000019496 3192 1.658 0.751 - - - - - 0.907 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
94. sh3bgr ENSDARG00000021633 3498 1.658 - - 0.832 - - - 0.826 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
95. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.657 - - 0.896 - - - 0.761 - - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
96. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.657 - - 0.766 - - - 0.891 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
97. ivd ENSDARG00000042853, ENSDARG00000112920 1526 1.653 - 0.829 - - - - 0.824 - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
98. tnw 16679 1.65 - - 0.859 - - - 0.791 - - tenascin W, transcript variant X2
99. emc3 ENSDARG00000020607 3406 1.65 - - 0.899 - - - - 0.751 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
100. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.649 - - - - - - 0.910 - 0.739 NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]

There are 1866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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