Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prdm9

Gene Name Gene ID Reads Annotation
prdm9 ENSDARG00000005382, ENSDARG00000110150 572 PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]










Genes with expression patterns similar to prdm9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
2. sec22a ENSDARG00000078328 1207 2.553 0.896 0.951 - 0.706 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
3. TRIM14 TRIM14 1424 2.481 0.883 0.828 - 0.770 - - - - -
4. tmed7 ENSDARG00000046022 2435 2.328 0.900 0.728 - - 0.700 - - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
5. cib1 ENSDARG00000103118 291 1.896 0.946 0.950 - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
6. mto1 ENSDARG00000055679 859 1.86 0.940 0.920 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
7. Metazoa_SRP_7 Metazoa_SRP_7 513 1.843 0.906 0.937 - - - - - - -
8. zbtb4 ENSDARG00000105255 362 1.842 0.858 0.984 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
9. pdk1 ENSDARG00000013128 526 1.836 0.869 0.967 - - - - - - - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
10. si:ch211-120e1.6 si:ch211-120e1.6 292 1.789 - 0.954 - 0.835 - - - - -
11. LRIF1_1 LRIF1_1 228 1.788 - 0.965 - - - 0.823 - - -
12. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.766 - 0.940 - 0.826 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
13. ankrd10b ENSDARG00000004771 654 1.766 0.964 - - - - - 0.802 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
14. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.761 0.859 0.902 - - - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
15. ZC3H12A_1 ZC3H12A_1 558 1.757 0.891 0.866 - - - - - - -
16. ftr67 ENSDARG00000098820 611 1.757 - 0.920 - 0.837 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
17. wdr35 ENSDARG00000069269 492 1.751 0.941 - - 0.810 - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
18. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.747 0.948 0.799 - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
19. bmpr1ba ENSDARG00000104100 828 1.741 0.912 0.829 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
20. gpcpd1 ENSDARG00000016011 2563 1.734 0.929 0.805 - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
21. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.732 - 0.896 - 0.836 - - - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
22. rhov ENSDARG00000070434 808 1.723 0.946 0.777 - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
23. map2k2a ENSDARG00000006609 856 1.722 0.860 0.862 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
24. ankrd50l ENSDARG00000007077 1115 1.71 - 0.941 - 0.769 - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
25. kif2c ENSDARG00000076228 2281 1.69 - 0.958 - 0.732 - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
26. CHORDC1 CHORDC1 544 1.685 - 0.887 - 0.798 - - - - -
27. loxl2b ENSDARG00000044074 1919 1.663 0.724 0.939 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
28. fam129ba ENSDARG00000062970 1578 1.655 0.870 0.785 - - - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
29. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.653 0.883 - - 0.770 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
30. srp19 ENSDARG00000035699 2624 1.65 0.855 - - 0.795 - - - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
31. map3k7 ENSDARG00000020469 2845 1.648 0.937 0.711 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
32. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.644 0.913 0.731 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
33. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.641 0.924 - - 0.717 - - - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
34. ccne2 ENSDARG00000098529 4695 1.638 0.915 - - - - 0.723 - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
35. lrrfip2 ENSDARG00000010400 2633 1.634 0.737 0.897 - - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
36. apba1b ENSDARG00000074328 254 1.633 - - - 0.819 - 0.814 - - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
37. CBFA2T3 ENSDARG00000079012 6799 1.628 0.927 - - - - 0.701 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
38. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.604 - 0.837 - 0.767 - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
39. FHOD3 FHOD3 422 1.598 - 0.804 - - - 0.794 - - -
40. herpud1 ENSDARG00000024314 1207 1.595 0.823 0.772 - - - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
41. clica clica 6206 1.586 0.741 0.845 - - - - - - -
42. wdr92 ENSDARG00000037334 329 1.58 - - - 0.845 - 0.735 - - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
43. pak4 ENSDARG00000018110 1962 1.579 - 0.768 - 0.811 - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
44. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.561 - 0.821 - - - 0.740 - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
45. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.554 0.814 0.740 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
46. irs1 ENSDARG00000054087 1809 1.552 - 0.834 - 0.718 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
47. CHST5 CHST5 1293 1.547 0.817 - - 0.730 - - - - -
48. chchd1 ENSDARG00000029100 2121 1.542 0.838 - - 0.704 - - - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
49. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.537 0.784 - - - - 0.753 - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
50. usp39 ENSDARG00000041908 501 1.534 - - - 0.829 - 0.705 - - - ubiquitin specific peptidase 39 [Source:ZFIN;Acc:ZDB-GENE-030131-966]
51. mpv17 ENSDARG00000032431 1225 1.528 0.779 0.749 - - - - - - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
52. magi1a ENSDARG00000070145 547 1.496 - - - 0.768 - 0.728 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
53. soul2 ENSDARG00000039499 1469 1.489 0.766 0.723 - - - - - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
54. rbm25 rbm25 3629 1.473 - - - 0.726 - - 0.747 - -
55. BAZ2B BAZ2B 3285 1.467 0.708 - - - - 0.759 - - -
56. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.456 - 0.707 - - - 0.749 - - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
57. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.455 - - - 0.722 - 0.733 - - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
58. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.449 0.748 - - - - - - - 0.701 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
59. slc2a2 ENSDARG00000056196 2061 1.443 0.730 0.713 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
60. ANKLE1 ANKLE1 346 1.439 - - 0.706 - - - 0.733 - -
61. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.435 - - - - - 0.730 0.705 - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
62. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.41 - - - - - 0.705 0.705 - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
63. si:dkey-27i16.3 si:dkey-27i16.3 494 0.979 - 0.979 - - - - - - -
64. il4r il4r 75 0.975 - 0.975 - - - - - - -
65. pnpla7a ENSDARG00000062986 1793 0.974 - 0.974 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
66. zgc:66475 ENSDARG00000099519 1348 0.971 0.971 - - - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
67. myof ENSDARG00000006112 618 0.971 - 0.971 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
68. iah1 ENSDARG00000015765 326 0.97 0.970 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
69. itgb1b.2 ENSDARG00000022689 523 0.97 - 0.970 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
70. efnb2b ENSDARG00000074050 77 0.97 0.970 - - - - - - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
71. chsy3 ENSDARG00000069472 271 0.969 - 0.969 - - - - - - - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
72. C11H19orf25 C11H19orf25 491 0.969 0.969 - - - - - - - -
73. zdhhc6 ENSDARG00000075721 1494 0.968 - 0.968 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
74. zic5 ENSDARG00000016022 1034 0.967 - 0.967 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
75. sema5a ENSDARG00000058821 333 0.967 - 0.967 - - - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
76. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.967 - 0.967 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
77. epb41l4a ENSDARG00000040087 1013 0.967 - 0.967 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
78. rac3b ENSDARG00000020795 1523 0.967 - 0.967 - - - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
79. pargl ENSDARG00000101719 155 0.965 - 0.965 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
80. olfml3b ENSDARG00000062171 264 0.964 - 0.964 - - - - - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
81. sox7 ENSDARG00000030125 806 0.964 - 0.964 - - - - - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
82. pcnxl3 pcnxl3 756 0.964 0.964 - - - - - - - -
83. nfyal ENSDARG00000001621 521 0.964 - 0.964 - - - - - - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]
84. zgc:174275 ENSDARG00000099845 172 0.964 - 0.964 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
85. si:ch211-11n16.2 ENSDARG00000099779 417 0.963 - 0.963 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
86. casp7 ENSDARG00000091836 657 0.963 - 0.963 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
87. hdac6 ENSDARG00000008384 144 0.963 - 0.963 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
88. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.962 - 0.962 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
89. med30 ENSDARG00000101115 133 0.962 - 0.962 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
90. amn ENSDARG00000062947 36 0.962 - 0.962 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
91. pcnxl4 377 0.961 - 0.961 - - - - - - - pecanex-like 4 (Drosophila), transcript variant X2
92. tdrd3 ENSDARG00000025421 633 0.961 - 0.961 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
93. uroc1 ENSDARG00000070394 357 0.961 - 0.961 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
94. LUZP1 ENSDARG00000075556 55 0.961 - 0.961 - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
95. TRIM35_10 TRIM35_10 484 0.961 - 0.961 - - - - - - -
96. azi1_1 azi1_1 1375 0.961 - 0.961 - - - - - - -
97. fahd1 ENSDARG00000031657 521 0.961 - 0.961 - - - - - - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
98. skiv2l ENSDARG00000062206 268 0.961 - 0.961 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
99. fam83fb ENSDARG00000104188 79 0.96 - 0.960 - - - - - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
100. si:ch211-149b19.3 ENSDARG00000076011 306 0.96 - 0.960 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]

There are 1366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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