Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prdm1b

Gene Name Gene ID Reads Annotation
prdm1b ENSDARG00000098925 440 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]










Genes with expression patterns similar to prdm1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm1b ENSDARG00000098925 440 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
2. fabp11b ENSDARG00000002311 354 4.299 - - 0.807 0.804 0.812 - - 0.956 0.920 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
3. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 4.073 - 0.874 0.811 0.712 0.772 - - 0.904 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
4. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 3.348 - - 0.850 0.829 0.822 - - - 0.847 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
5. rx2 ENSDARG00000040321 112 2.751 - - 0.866 0.943 - - - - 0.942 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
6. fezf1 ENSDARG00000010270 379 2.639 - - - 0.847 0.860 - - 0.932 - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
7. atoh7 ENSDARG00000069552 254 2.562 - - 0.809 0.822 - - - - 0.931 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
8. rorb ENSDARG00000033498 544 2.499 - - 0.751 0.778 - - - - 0.970 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
9. si:ch211-237l4.6 ENSDARG00000056915 49 2.486 1.000 - 0.738 - 0.748 - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
10. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 2.478 - - 0.835 0.717 - - - - 0.926 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
11. CU929052.1 CU929052.1 642 2.477 1.000 - - 0.702 0.775 - - - -
12. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.431 - - 0.785 0.880 - - - - 0.766 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
13. vsx2 ENSDARG00000005574 102 2.383 - - 0.759 0.802 - - - - 0.822 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
14. fezf2 ENSDARG00000070677 224 2.375 - - 0.780 - 0.894 - - - 0.701 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
15. slc6a1a ENSDARG00000045944 260 2.182 - 0.711 - - 0.746 - - - 0.725 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
16. lhfpl2b ENSDARG00000098153 132 1.941 1.000 0.941 - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
17. foxg1a ENSDARG00000070769 928 1.851 - - - 0.919 0.932 - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
18. nt5c1ba ENSDARG00000018153 31 1.812 1.000 - - - - - - - 0.812 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
19. cadm3 ENSDARG00000057013 1545 1.809 - - - - - - - 0.946 0.863 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
20. fstl5 ENSDARG00000040198 213 1.798 - - 0.892 - - - - 0.906 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
21. ift20 ENSDARG00000040556 285 1.793 - 0.892 - - - - - 0.901 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
22. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1.761 1.000 0.761 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
23. si:dkeyp-104b3.18 ENSDARG00000101129 1 1.761 1.000 0.761 - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
24. lingo2 lingo2 67 1.74 1.000 - - - 0.740 - - - -
25. FP102191.1 FP102191.1 21 1.739 - 1.000 0.739 - - - - - -
26. foxn4 ENSDARG00000010591 2332 1.712 - - - - - - - 0.854 0.858 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
27. tbr1b ENSDARG00000004712 248 1.709 - - 0.878 - 0.831 - - - - T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
28. eef1a1a ENSDARG00000039502 234 1.707 0.802 - - - - - - 0.905 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
29. ebf3 ebf3 4238 1.69 - - - 0.775 - - - 0.915 -
30. cep128 ENSDARG00000103771 75 1.668 - 0.904 - - - 0.764 - - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
31. foxg1b ENSDARG00000032705 354 1.66 - - - 0.802 - - - - 0.858 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
32. BX957337.1 BX957337.1 1685 1.652 - - - 0.740 - - - 0.912 -
33. tubb5 ENSDARG00000037997 18691 1.649 - - - 0.730 - - - 0.919 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
34. NELL2A ENSDARG00000090690 840 1.646 - 0.761 - - - - - 0.885 - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
35. vamp2 ENSDARG00000056877 2158 1.644 - - - - - - - 0.918 0.726 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
36. pmelb ENSDARG00000033760 206 1.63 - - - - 0.812 - - - 0.818 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
37. six3b ENSDARG00000054879 2416 1.623 - - - 0.751 - - - - 0.872 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
38. si:ch211-253p18.2 ENSDARG00000092770 21 1.615 0.854 0.761 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
39. ahr1b ENSDARG00000023537 44 1.615 - - - - 0.723 - - - 0.892 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
40. dlx1a ENSDARG00000013125 142 1.606 - - - - 0.853 - - - 0.753 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
41. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.598 - - 0.760 - 0.838 - - - -
42. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.598 - - - 0.817 0.781 - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
43. si:ch211-161h7.5 ENSDARG00000093044 12 1.557 0.854 - - - - - - - 0.703 si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
44. nr2e1 ENSDARG00000017107 340 1.557 - - 0.744 - 0.813 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
45. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.554 - 0.761 - - - - - - 0.793 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
46. TMEM57 TMEM57 260 1.55 - - - 0.777 0.773 - - - -
47. crygmx ENSDARG00000053862 482 1.547 - - 0.706 0.841 - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
48. lhx2b ENSDARG00000031222 517 1.543 - - - 0.736 0.807 - - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
49. cps1 ENSDARG00000020028 67 1.542 - - - 0.762 0.780 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
50. bcl11ba ENSDARG00000062510 169 1.535 - - 0.702 0.833 - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
51. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.529 - - - 0.807 0.722 - - - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
52. piwil1 ENSDARG00000041699 21 1.527 - - 0.747 - 0.780 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
53. CLDN22 CLDN22 114 1.525 - - - 0.774 - 0.751 - - -
54. si:ch211-152c2.3 ENSDARG00000045898 3448 1.51 - - - 0.773 0.737 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
55. pax6l pax6l 54 1.51 - - - 0.802 - - - - 0.708
56. eomesa ENSDARG00000006640 257 1.499 - - 0.775 - 0.724 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
57. irx6a ENSDARG00000034420 29 1.489 - 0.761 - - - - - - 0.728 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
58. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 1.473 - - 0.766 0.707 - - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
59. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.473 - - - 0.729 - - - - 0.744 G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
60. crhbp ENSDARG00000024831 63 1.472 - 0.761 - 0.711 - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
61. lhx5 ENSDARG00000057936 785 1.468 - - 0.742 0.726 - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
62. aldh1a3 ENSDARG00000076933 95 1.451 - - 0.734 - 0.717 - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
63. amer2 ENSDARG00000075222 594 1.446 - - - 0.709 - - - - 0.737 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
64. lrrc23 ENSDARG00000006174 234 1.425 0.724 - - - - 0.701 - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
65. PARP9 ENSDARG00000006848 34 1 1.000 - - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
66. saga ENSDARG00000012610 63 1 - 1.000 - - - - - - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
67. FP236162.1 FP236162.1 2 1 1.000 - - - - - - - -
68. NPFFR1 ENSDARG00000111997 29 1 1.000 - - - - - - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
69. foxq1a ENSDARG00000030896 121 1 1.000 - - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
70. si:dkey-45j10.2 si:dkey-45j10.2 5 1 1.000 - - - - - - - -
71. rapgef3 ENSDARG00000079291 69 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
72. st8sia3 ENSDARG00000045301 3 1 1.000 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060228-4]
73. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - - - - - 1.000 - - -
74. csf3r ENSDARG00000045959 4 1 - - - - - 1.000 - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
75. zgc:154040 16 1 1.000 - - - - - - - - zgc:154040
76. bmp8a ENSDARG00000035677 40 1 1.000 - - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
77. atmin ENSDARG00000068601 24 1 1.000 - - - - - - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
78. ccnd3 ENSDARG00000027391 1 1 1.000 - - - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
79. fancg ENSDARG00000024967, ENSDARG00000113462 82 1 1.000 - - - - - - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
80. palmda ENSDARG00000001913 26 1 - 1.000 - - - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
81. si:dkey-14d8.9 si:dkey-14d8.9 66 1 1.000 - - - - - - - -
82. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 1.000 - - - - - - - -
83. si:dkey-258p11.3 si:dkey-258p11.3 9 1 1.000 - - - - - - - -
84. RASGRF1 ENSDARG00000073824 32 1 1.000 - - - - - - - - Ras protein specific guanine nucleotide releasing factor 1 [Source:HGNC Symbol;Acc:HGNC:9875]
85. si:dkey-14d8.7 ENSDARG00000045834 5 1 1.000 - - - - - - - - si:dkey-14d8.7 [Source:ZFIN;Acc:ZDB-GENE-041210-143]
86. zgc:171776 ENSDARG00000032156 14 1 - - - - - 1.000 - - - zgc:171776 [Source:ZFIN;Acc:ZDB-GENE-071004-36]
87. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 1.000 - - - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
88. cpeb1b ENSDARG00000008454 37 1 1.000 - - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
89. sorbs2a ENSDARG00000003046 242 1 1.000 - - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
90. si:ch211-187d1.3 si:ch211-187d1.3 1 1 1.000 - - - - - - - -
91. pcdh1g18 ENSDARG00000099447 7 1 1.000 - - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
92. styx ENSDARG00000057699 48 1 1.000 - - - - - - - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
93. CR932358.2 CR932358.2 15 1 1.000 - - - - - - - -
94. SLC1A7 SLC1A7 3 1 1.000 - - - - - - - -
95. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 1.000 - - - - - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
96. MFAP4 ENSDARG00000090783 8 1 - 1.000 - - - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
97. nsun5_1 ENSDARG00000043209 3 1 1.000 - - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
98. cpa5 ENSDARG00000021339 61 1 1.000 - - - - - - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
99. C12H17orf62 C12H17orf62 4 1 - - - - - 1.000 - - -
100. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 1.000 - - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]

There are 941 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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