Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prdm1a

Gene Name Gene ID Reads Annotation
prdm1a ENSDARG00000002445 1340 PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]










Genes with expression patterns similar to prdm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm1a ENSDARG00000002445 1340 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
2. ecm2 ENSDARG00000071549 1527 2.681 - 0.897 0.911 - - 0.873 - - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
3. bambib ENSDARG00000099677 4267 2.471 - 0.804 0.953 - - 0.714 - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
4. AL929434.1 AL929434.1 3294 2.438 0.734 - 0.904 - - - 0.800 - -
5. rac2 ENSDARG00000038010 5837 2.342 0.742 - 0.849 - - - 0.751 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
6. sp9 ENSDARG00000099374 2266 2.318 0.701 0.800 - - - 0.817 - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
7. unc5b ENSDARG00000033327 3432 2.237 0.795 0.738 - - - 0.704 - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
8. mxra8b ENSDARG00000062129 1004 1.904 - 0.908 0.996 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
9. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.823 - - 0.976 - - 0.847 - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
10. si:dkey-92i15.4 ENSDARG00000078387 428 1.769 - 0.776 0.993 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
11. stk38a ENSDARG00000019973 1343 1.71 - - 0.988 - - - 0.722 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
12. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.709 - 0.893 - - - 0.816 - - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
13. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.702 - - 0.966 - - - 0.736 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
14. AIFM2 ENSDARG00000077549 1419 1.69 - - 0.987 - - - 0.703 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
15. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.645 - 0.880 - - - 0.765 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
16. clint1a ENSDARG00000025535 4965 1.644 - - 0.901 - - - 0.743 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
17. cbln4 ENSDARG00000061240 67 1.641 - - - - - 0.835 - 0.806 - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
18. tm9sf4 ENSDARG00000002536 1684 1.639 - - - - - 0.867 0.772 - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
19. tmem258 ENSDARG00000078785 9578 1.635 - - 0.913 - - - 0.722 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
20. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 1.612 0.706 - 0.906 - - - - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
21. cyp2u1 ENSDARG00000026548 85 1.608 - 0.876 - - - - - 0.732 - cytochrome P450, family 2, subfamily U, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070730-1]
22. BX547934.1 ENSDARG00000097061 35 1.597 - - - - - 0.817 - 0.780 -
23. slc44a2 ENSDARG00000037059 1903 1.593 0.798 - - - - - 0.795 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
24. si:dkey-58f10.12 ENSDARG00000092680 258 1.584 - 0.795 - - - 0.789 - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
25. abcd3a ENSDARG00000104085, ENSDARG00000110888, ENSDARG00000116461 888 1.573 - - - - - 0.768 - 0.805 - ATP-binding cassette, sub-family D (ALD), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2868]
26. si:dkey-46g23.3 si:dkey-46g23.3 16 1.568 - 0.795 - - - 0.773 - - -
27. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.564 - - - - - 0.852 0.712 - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
28. bmp4 ENSDARG00000019995 2038 1.559 - 0.798 - - - - 0.761 - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
29. mospd2 ENSDARG00000026024 854 1.559 - 0.745 - - - 0.814 - - - motile sperm domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-1]
30. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.554 - 0.768 - - - 0.786 - - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
31. ccnf ENSDARG00000105046 1790 1.554 - 0.763 - - - 0.791 - - - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
32. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 1.547 - 0.795 - - - 0.752 - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
33. stxbp2 ENSDARG00000007603 1646 1.547 - 0.766 - - - - 0.781 - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
34. KRTCAP2 ENSDARG00000070386 10103 1.531 - - 0.820 - - - 0.711 - - keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
35. AL929022.2 AL929022.2 567 1.527 - 0.800 - - - - - 0.727 -
36. TMEM245 ENSDARG00000070455 85 1.515 - 0.807 - - - - - 0.708 - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
37. coro2a ENSDARG00000005210 1479 1.506 - 0.727 - - - - 0.779 - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
38. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.506 - 0.749 - - - - 0.757 - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
39. ildr1b ENSDARG00000040910 169 1.503 - 0.763 - - - - - 0.740 - immunoglobulin-like domain containing receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040912-72]
40. pigs ENSDARG00000017813 718 1.503 - - - - - - 0.726 0.777 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
41. kctd9 kctd9 973 1.499 - 0.721 - - - - - 0.778 -
42. CABZ01068153.1 CABZ01068153.1 211 1.499 - 0.756 - - - 0.743 - - -
43. CABZ01005649.2 CABZ01005649.2 715 1.496 - 0.707 - - - - - 0.789 -
44. ptgdsb ptgdsb 5200 1.493 0.727 0.766 - - - - - - -
45. CR382385.2 ENSDARG00000115992 353 1.492 - 0.770 - - - - - 0.722 -
46. cnstb ENSDARG00000042759 105 1.491 - - - - - 0.789 0.702 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
47. tmem176l.4 ENSDARG00000074390 1886 1.489 - - - - - 0.743 0.746 - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
48. bambia ENSDARG00000055381 2922 1.479 0.740 - - - - 0.739 - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
49. pex10 ENSDARG00000041511 52 1.478 - 0.714 - - - - - 0.764 - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
50. dctn1a ENSDARG00000019743 45 1.468 - 0.727 - - - 0.741 - - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
51. mtmr2 ENSDARG00000004616 1052 1.467 - - - - - - 0.732 0.735 - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
52. PRSS16 ENSDARG00000076602 963 1.459 0.720 - - - - 0.739 - - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
53. si:dkey-246i14.3 ENSDARG00000090427 365 1.447 - - - - - 0.705 0.742 - - si:dkey-246i14.3 [Source:ZFIN;Acc:ZDB-GENE-100922-64]
54. ARSB ENSDARG00000108788 774 1.445 - 0.715 - - - 0.730 - - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
55. mfng ENSDARG00000042925 104 1.444 - - - - - 0.726 - 0.718 - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
56. uck1 ENSDARG00000022218, ENSDARG00000109414 355 1.442 0.713 - - - - 0.729 - - - uridine-cytidine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-113]
57. pdcd6ip ENSDARG00000025269 2522 1.428 - 0.720 - - - - 0.708 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
58. grhl3 ENSDARG00000078552 897 1.427 - - - - - 0.712 0.715 - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
59. bmp2a ENSDARG00000013409 303 1.421 - 0.705 - - - - 0.716 - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
60. mmp2 ENSDARG00000017676 2347 1.42 - 0.720 - - - 0.700 - - - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
61. trim71 ENSDARG00000075593 2750 1.413 - 0.709 - - - - 0.704 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
62. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.412 0.704 - - - - 0.708 - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
63. si:dkey-54g2.6 si:dkey-54g2.6 252 0.997 - - 0.997 - - - - - -
64. sptlc3 ENSDARG00000030743 596 0.997 - - 0.997 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
65. CR382281.1 ENSDARG00000100098 135 0.997 - - 0.997 - - - - - -
66. c1ql3a ENSDARG00000010350 179 0.997 - - 0.997 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
67. wnt10a ENSDARG00000017155 491 0.997 - - 0.997 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
68. si:dkey-220k22.3 ENSDARG00000094693 166 0.997 - - 0.997 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
69. tbc1d10a tbc1d10a 462 0.997 - - 0.997 - - - - - -
70. CR855996.2 ENSDARG00000104450 310 0.997 - - 0.997 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
71. ndufa4l2 153 0.997 - - 0.997 - - - - - - NDUFA4, mitochondrial complex associated like 2
72. si:ch211-173m16.2 ENSDARG00000093284 186 0.997 - - 0.997 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
73. npdc1 npdc1 221 0.996 - - 0.996 - - - - - -
74. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.996 - - 0.996 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
75. mbtps2 ENSDARG00000057577 1285 0.995 - - 0.995 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
76. ralba ENSDARG00000040778 1574 0.995 - - 0.995 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
77. tmco4 ENSDARG00000078924 330 0.995 - - 0.995 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
78. ppp1r14c ENSDARG00000077341 1587 0.995 - - 0.995 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
79. CABZ01008011.1 CABZ01008011.1 761 0.995 - - 0.995 - - - - - -
80. ZNHIT6 ENSDARG00000095817 355 0.995 - - 0.995 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
81. gnb1a ENSDARG00000090454 481 0.995 - - 0.995 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
82. si:ch211-250c4.3 si:ch211-250c4.3 677 0.994 - - 0.994 - - - - - -
83. dnajc3 dnajc3 802 0.994 - - 0.994 - - - - - -
84. GIT1 ENSDARG00000039489 1157 0.994 - - 0.994 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
85. smpd1 ENSDARG00000076121 584 0.994 - - 0.994 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
86. MAP4_1 MAP4_1 1153 0.993 - - 0.993 - - - - - -
87. hipk3b ENSDARG00000062082 1248 0.993 - - 0.993 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
88. tbc1d12a ENSDARG00000038237 698 0.993 - - 0.993 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
89. PTDSS2 ENSDARG00000101018 881 0.993 - - 0.993 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
90. edc3 ENSDARG00000051931 780 0.993 - - 0.993 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
91. slc2a10 ENSDARG00000090820 637 0.993 - - 0.993 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
92. hdac4 ENSDARG00000098349 1370 0.992 - - 0.992 - - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
93. itsn1 ENSDARG00000000086 684 0.992 - - 0.992 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
94. sema3fb ENSDARG00000055373 834 0.992 - - 0.992 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
95. BX571715.2 BX571715.2 1316 0.992 - - 0.992 - - - - - -
96. mark2a ENSDARG00000079905 1765 0.992 - - 0.992 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
97. ercc5 ENSDARG00000023678 468 0.992 - - 0.992 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
98. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.991 - - 0.991 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
99. hint3 ENSDARG00000074286 1015 0.991 - - 0.991 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
100. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.991 - - 0.991 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]

There are 1261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA