Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prdm13

Gene Name Gene ID Reads Annotation
prdm13 ENSDARG00000078701 205 PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]










Genes with expression patterns similar to prdm13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm13 ENSDARG00000078701 205 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
2. Mar-09 Mar-09 126 2.628 0.858 - - - - 0.829 0.941 - -
3. cadpsb ENSDARG00000070567 458 2.626 0.828 - - - - 0.907 0.891 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
4. cspg5a ENSDARG00000069981 1699 2.61 0.812 - - - - 0.897 0.901 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
5. ptf1a ENSDARG00000014479 349 2.585 - - - - - 0.982 0.836 0.767 - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
6. slc35g2b ENSDARG00000045447 378 2.573 0.871 - - - - 0.785 0.917 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
7. SPOCK1 ENSDARG00000074644 794 2.566 0.799 - - - - 0.890 0.877 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
8. map6 map6 70 2.559 0.814 - - - - 0.835 0.910 - -
9. thsd7a thsd7a 194 2.552 0.730 - - - - 0.917 0.905 - -
10. WNK2 ENSDARG00000104989 429 2.549 0.709 - - - - 0.897 0.943 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
11. dbx2 2971 2.54 0.755 - - - - 0.914 0.871 - - developing brain homeobox 2
12. pcyt1ba ENSDARG00000058162 206 2.528 0.722 - - - - 0.967 0.839 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
13. nhlh2 ENSDARG00000025495 1860 2.507 0.758 - - - - 0.843 0.906 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
14. csf1b ENSDARG00000068263 248 2.488 0.848 - - - - 0.839 0.801 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
15. PPP2R5B ENSDARG00000054931 213 2.485 0.920 - - - - 0.857 0.708 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
16. bhlhe22 ENSDARG00000058039 1673 2.478 0.799 - - - - 0.802 0.877 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
17. slc8a2b ENSDARG00000100592 598 2.477 0.763 - - - - 0.883 0.831 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
18. SLITRK5 SLITRK5 122 2.462 0.839 - - - - 0.704 0.919 - -
19. her4.1 ENSDARG00000056732 1264 2.456 0.802 - - - - 0.820 0.834 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
20. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 2.431 0.717 - - - - 0.773 0.941 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
21. nbeaa ENSDARG00000070080 862 2.428 0.851 - - - - 0.826 0.751 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
22. negr1 ENSDARG00000021607 1051 2.392 0.898 - - - - 0.746 0.748 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
23. kcnc3a ENSDARG00000055855 1821 2.389 0.760 - - - - 0.789 0.840 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
24. tuba1c ENSDARG00000055216 8384 2.379 0.770 - - - - 0.747 0.862 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
25. EPB41L1 EPB41L1 1896 2.378 0.783 - - - - 0.764 0.831 - -
26. ctnnd2b ENSDARG00000003779 964 2.376 0.818 - - - - 0.713 0.845 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
27. grin1a ENSDARG00000027828 1327 2.373 0.723 - - - - 0.842 0.808 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
28. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.357 0.826 - - - - 0.781 0.750 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
29. nova2 ENSDARG00000017673 7685 2.327 0.762 - - - - 0.720 0.845 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
30. lhx1a ENSDARG00000014018 958 2.324 0.707 - - - - 0.829 0.788 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
31. dnajc5aa ENSDARG00000042948 2885 2.317 - - - - - 0.830 0.775 - 0.712 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
32. lrrc4.1 ENSDARG00000069402 323 2.314 0.712 - - - - 0.750 0.852 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
33. syngr3a ENSDARG00000014871 405 2.311 0.752 - - - - 0.841 0.718 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
34. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.3 0.720 - - - - 0.844 0.736 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
35. SYT2 ENSDARG00000014169 265 2.3 0.761 - - - - 0.714 0.825 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
36. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.293 0.739 - - - - 0.793 0.761 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
37. dpysl5b ENSDARG00000059311 600 2.289 0.713 - - - - 0.829 0.747 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
38. clstn3 ENSDARG00000073883 590 2.286 0.733 - - - - 0.807 0.746 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
39. rufy3 ENSDARG00000029692 3031 2.285 0.714 - - - - 0.770 0.801 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
40. pax6a ENSDARG00000103379 3061 2.278 0.724 - - - - 0.795 0.759 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
41. C8H1orf106 C8H1orf106 2690 2.271 0.717 - - - - 0.785 0.769 - -
42. mllt11 ENSDARG00000071026 2518 2.25 0.702 - - - - 0.705 0.843 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
43. tmie ENSDARG00000069423 305 2.233 0.750 - - - - 0.709 0.774 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
44. dpysl5a ENSDARG00000011141 1827 2.228 0.724 - - - - 0.703 0.801 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
45. LMTK3 LMTK3 222 2.197 0.705 - - - - - 0.717 - 0.775
46. cuedc1a ENSDARG00000068716 232 1.936 - - - - - 0.971 0.965 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
47. GADD45G_1 GADD45G_1 236 1.921 - - - - - 0.976 0.945 - -
48. CDH12 CDH12 44 1.909 - - - - - 0.909 1.000 - -
49. ATP6AP1L ATP6AP1L 164 1.906 - - - - - 0.941 0.965 - -
50. RNF208 ENSDARG00000078056 60 1.902 - - - - - 0.962 0.940 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
51. zgc:194665 ENSDARG00000004577 136 1.895 - - - - - 0.934 0.961 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
52. diras1a ENSDARG00000028066 126 1.855 - - - - - 0.877 0.978 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
53. BRINP3 BRINP3 11 1.851 - - - - - 0.851 1.000 - -
54. scn2b ENSDARG00000101713 796 1.847 - - - - - 0.929 0.918 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
55. SLITRK4 ENSDARG00000079781 54 1.842 - - - - - 0.842 1.000 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
56. pou4f1 ENSDARG00000005559 821 1.841 - - - - - 0.940 0.901 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
57. slc12a5b ENSDARG00000078187 329 1.831 - - - - - 0.941 0.890 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
58. scn1bb ENSDARG00000105003 239 1.83 - - - - - 0.962 0.868 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
59. sprn ENSDARG00000056004 128 1.801 - - - - - 0.859 0.942 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
60. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.799 - - - - - 0.804 0.995 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
61. trim36 ENSDARG00000062794 785 1.798 - - - - - 0.883 0.915 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
62. NPTXR NPTXR 241 1.798 - - - - - 0.916 0.882 - -
63. THEM6 ENSDARG00000103914 49 1.795 - - - - - 0.817 0.978 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
64. GRIN3A ENSDARG00000075802 27 1.793 - - - - - 0.877 0.916 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
65. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.791 - - - - - 0.914 0.877 - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
66. dnajc6 ENSDARG00000079891 438 1.789 0.819 - - - - - 0.970 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
67. PDZD4 ENSDARG00000090564 131 1.787 - - - - - 0.964 0.823 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
68. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.781 0.824 - - - - 0.957 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
69. sall3b ENSDARG00000057586 982 1.776 - - - - - 0.860 0.916 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
70. fbxo41 ENSDARG00000078908 95 1.774 - - - - - 0.888 0.886 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
71. elavl4 ENSDARG00000045639 998 1.77 - - - - - 0.871 0.899 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
72. stx12l ENSDARG00000044605 99 1.768 - - - - - 0.852 0.916 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
73. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.767 0.894 - - - - - 0.873 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
74. dync1i1 ENSDARG00000060948 554 1.766 - - - - - 0.790 0.976 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
75. Sep-03 Sep-03 1124 1.758 - - - - - 0.844 0.914 - -
76. gng3 ENSDARG00000009553 2530 1.756 - - - - - 0.863 0.893 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
77. PPP1R9B PPP1R9B 855 1.755 - - - - - 0.904 0.851 - -
78. RAB39B RAB39B 482 1.754 - - - - - 0.823 0.931 - -
79. hmp19 2554 1.754 0.848 - - - - - 0.906 - - HMP19 protein
80. JAKMIP1 ENSDARG00000076090 55 1.753 - - - - - 0.851 0.902 - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
81. TUSC3 ENSDARG00000078854 1021 1.749 - - - - - 0.882 0.867 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
82. pcp4b 1080 1.748 - - - - - 0.866 0.882 - - Purkinje cell protein 4b
83. PRR12 PRR12 38 1.746 - - - - - 0.910 0.836 - -
84. arhgap22 ENSDARG00000021255 117 1.745 0.812 - - - - - 0.933 - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
85. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.74 - - - - - - 0.969 0.771 - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
86. si:ch211-117c9.5 ENSDARG00000071235 154 1.737 0.837 - - - - - 0.900 - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
87. rac3a ENSDARG00000090062 394 1.734 - - - - - 0.880 0.854 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
88. gfap ENSDARG00000025301 5584 1.734 0.872 - - - - - 0.862 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
89. sez6l ENSDARG00000100594 35 1.731 - - - - - 0.895 0.836 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
90. nes ENSDARG00000088805 2710 1.731 0.830 - - - - - 0.901 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
91. LRFN5_1 LRFN5_1 96 1.73 - - - - - 0.862 0.868 - -
92. TUBB8P7_1 TUBB8P7_1 2722 1.728 - - - - - 0.771 0.957 - -
93. ncam1b ENSDARG00000007220 233 1.726 - - - - - 0.875 0.851 - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
94. mpz ENSDARG00000038609 1740 1.726 0.781 - - - - - 0.945 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
95. GABRG1 ENSDARG00000101995 201 1.726 - - - - - 0.749 0.977 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
96. st8sia5 ENSDARG00000036584 529 1.726 0.745 - - - - - 0.981 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
97. rab39b rab39b 449 1.725 - - - - - 0.919 0.806 - -
98. cadm1b ENSDARG00000042677 277 1.722 - - - - - 0.807 0.915 - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
99. chga ENSDARG00000008829 1086 1.722 0.793 - - - - - 0.929 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
100. st8sia2 ENSDARG00000018788 2183 1.718 0.789 - - - - - 0.929 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]

There are 1425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA