Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prdm11

Gene Name Gene ID Reads Annotation
prdm11 ENSDARG00000074468 2 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]










Genes with expression patterns similar to prdm11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm11 ENSDARG00000074468 2 4 1.000 - 1.000 - 1.000 - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
2. BX649314.1 BX649314.1 3 2 1.000 - - - - - - - 1.000
3. adcyap1a ENSDARG00000004015 67 1.939 0.939 - - - 1.000 - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
4. CR631122.1 ENSDARG00000044534 8 1.912 - - - - 0.912 - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
5. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1.859 - - - - 0.859 - - - 1.000
6. nptx2b ENSDARG00000045164 5 1.837 - - 1.000 - - - - - 0.837 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
7. si:dkey-234l24.9 si:dkey-234l24.9 8 1.807 0.818 - - - 0.989 - - - -
8. tmem167b ENSDARG00000059400 9 1.771 0.771 - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
9. CABZ01076817.1 CABZ01076817.1 4 1.76 1.000 - - - - - - - 0.760
10. flh flh 47 1.735 1.000 - 0.735 - - - - - -
11. CR352265.1 ENSDARG00000062758 39 1.705 0.927 - - - - - - - 0.778
12. LPHN1_1 LPHN1_1 7 1.702 1.000 - 0.702 - - - - - -
13. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.628 - - - - 0.901 - - - 0.727 protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
14. hs3st2 ENSDARG00000059616 2 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
15. si:dkey-4j21.1 17 1 1.000 - - - - - - - - si:dkey-4j21.1, transcript variant X2
16. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
17. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
18. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
19. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
20. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
21. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
22. pde8b ENSDARG00000063706 1 1 - - 1.000 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
23. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
24. CABZ01087025.1 ENSDARG00000117232 10 1 - - 1.000 - - - - - -
25. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
26. CR388152.1 CR388152.1 7 1 - - - - - - - - 1.000
27. si:dkey-56m15.4 si:dkey-56m15.4 39 1 1.000 - - - - - - - -
28. cox5aa ENSDARG00000088383 21 1 - - - - - - - - 1.000 cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
29. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
30. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
31. RCVRN_1 RCVRN_1 46 1 - - 1.000 - - - - - -
32. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
33. BX511021.4 ENSDARG00000117436 4 1 - - - - - - - - 1.000
34. MAST1 MAST1 29 1 1.000 - - - - - - - -
35. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
36. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
37. TACR3 TACR3 1 1 - - - - - - - - 1.000
38. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
39. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
40. ENSDARG00000089816 ENSDARG00000089816 4 1 - - 1.000 - - - - - -
41. CABZ01068819.1 CABZ01068819.1 20 1 - - 1.000 - - - - - -
42. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
43. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
44. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
45. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
46. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
47. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - 1.000 - - - - - -
48. grm1a ENSDARG00000026796 9 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
49. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
50. BX322792.1 ENSDARG00000117506 1 1 - - - - 1.000 - - - - uncharacterized LOC110439912 [Source:NCBI gene;Acc:110439912]
51. GBA3 ENSDARG00000031150 1 1 - - - - 1.000 - - - - glucosidase, beta, acid 3 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-050522-351]
52. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
53. CR848788.1 ENSDARG00000103037 1 1 - - 1.000 - - - - - -
54. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
55. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
56. WASF1 ENSDARG00000060349 1 1 - - 1.000 - - - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
57. U5_7 U5_7 0 1 - - - - - - - - 1.000
58. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - 1.000 - - - -
59. fam19a1 7 1 - - - - - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
60. MOB2 MOB2 4 1 - - 1.000 - - - - - -
61. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
62. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
63. gnat2 ENSDARG00000042529 112 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
64. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - 1.000 - - - -
65. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - 1.000 - - - - - -
66. lppr5b lppr5b 23 1 1.000 - - - - - - - -
67. itpr2 ENSDARG00000011909 3 1 - - - - - - - - 1.000 inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
68. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - 1.000 - - - - - -
69. si:dkeyp-92c5.2 si:dkeyp-92c5.2 1 1 - - - - 1.000 - - - -
70. zgc:153151 ENSDARG00000069563 126 1 - - 1.000 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
71. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - - - 1.000 - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
72. saa ENSDARG00000045999 0 1 - - - - - - - - 1.000 serum amyloid A [Source:ZFIN;Acc:ZDB-GENE-040927-15]
73. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
74. si:dkey-14d8.2 38 1 - - - - - - - - 1.000 si:dkey-14d8.2
75. crybb2 ENSDARG00000053512 15 1 - - 1.000 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
76. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
77. AL954698.2 ENSDARG00000102132 28 1 - - 1.000 - - - - - -
78. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
79. ft2 ENSDARG00000109567 5 1 - - 1.000 - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
80. si:dkey-179k24.6 si:dkey-179k24.6 5 1 1.000 - - - - - - - -
81. rxfp1 ENSDARG00000090071 6 1 - - 1.000 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
82. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
83. CU929036.1 CU929036.1 7 1 - - 1.000 - - - - - -
84. FMNL1 FMNL1 7 1 - - - - - - - - 1.000
85. zgc:194686 ENSDARG00000076388 1 1 - - - - 1.000 - - - - zgc:194686 [Source:ZFIN;Acc:ZDB-GENE-080721-26]
86. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
87. zgc:173619_1 2 1 - - - - - - - - 1.000 zgc:173619
88. PFKFB1 ENSDARG00000037140 5 1 - - - - 1.000 - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
89. ENKD1 ENSDARG00000043550 44 1 - - 1.000 - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
90. SLC1A7 SLC1A7 3 1 - - 1.000 - - - - - -
91. zgc:112399 1 1 - - - - 1.000 - - - - zgc:112399
92. FAXC FAXC 102 1 1.000 - - - - - - - -
93. zgc:109965 ENSDARG00000012126 11 1 - - 1.000 - - - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
94. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
95. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
96. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
97. BX510935.2 BX510935.2 1 1 - - 1.000 - - - - - -
98. si:dkey-66n24.2 si:dkey-66n24.2 69 1 1.000 - - - - - - - -
99. U4_1 U4_1 2 1 - - - - - - - - 1.000
100. C20H2orf71 C20H2orf71 2 1 - - 1.000 - - - - - -

There are 655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA