Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prdm11

Gene Name Gene ID Reads Annotation
prdm11 ENSDARG00000074468 2 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]










Genes with expression patterns similar to prdm11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm11 ENSDARG00000074468 2 4 1.000 - 1.000 - 1.000 - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
2. BX649314.1 BX649314.1 3 2 1.000 - - - - - - - 1.000
3. adcyap1a ENSDARG00000004015 67 1.939 0.939 - - - 1.000 - - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
4. CR631122.1 ENSDARG00000044534 8 1.912 - - - - 0.912 - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
5. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1.859 - - - - 0.859 - - - 1.000
6. nptx2b ENSDARG00000045164 5 1.837 - - 1.000 - - - - - 0.837 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
7. si:dkey-234l24.9 si:dkey-234l24.9 8 1.807 0.818 - - - 0.989 - - - -
8. tmem167b ENSDARG00000059400 9 1.771 0.771 - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
9. CABZ01076817.1 CABZ01076817.1 4 1.76 1.000 - - - - - - - 0.760
10. flh flh 47 1.735 1.000 - 0.735 - - - - - -
11. CR352265.1 ENSDARG00000062758 39 1.705 0.927 - - - - - - - 0.778
12. LPHN1_1 LPHN1_1 7 1.702 1.000 - 0.702 - - - - - -
13. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.628 - - - - 0.901 - - - 0.727 protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
14. GBA3 ENSDARG00000031150 1 1 - - - - 1.000 - - - - glucosidase, beta, acid 3 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-050522-351]
15. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
16. CR848788.1 ENSDARG00000103037 1 1 - - 1.000 - - - - - -
17. chst2b ENSDARG00000058585 33 1 1.000 - - - - - - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
18. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
19. WASF1 ENSDARG00000060349 1 1 - - 1.000 - - - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
20. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
21. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
22. CSMD1 CSMD1 15 1 1.000 - - - - - - - -
23. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
24. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - 1.000 - - - - - -
25. grm1a ENSDARG00000026796 9 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
26. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
27. BX322792.1 ENSDARG00000117506 1 1 - - - - 1.000 - - - - uncharacterized LOC110439912 [Source:NCBI gene;Acc:110439912]
28. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - 1.000 - - - - - -
29. lppr5b lppr5b 23 1 1.000 - - - - - - - -
30. itpr2 ENSDARG00000011909 3 1 - - - - - - - - 1.000 inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
31. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - 1.000 - - - - - -
32. U5_7 U5_7 0 1 - - - - - - - - 1.000
33. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - 1.000 - - - -
34. fam19a1 7 1 - - - - - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
35. MOB2 MOB2 4 1 - - 1.000 - - - - - -
36. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
37. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
38. gnat2 ENSDARG00000042529 112 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
39. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - 1.000 - - - -
40. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
41. pde8b ENSDARG00000063706 1 1 - - 1.000 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
42. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
43. CABZ01087025.1 ENSDARG00000117232 10 1 - - 1.000 - - - - - -
44. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
45. CR388152.1 CR388152.1 7 1 - - - - - - - - 1.000
46. si:dkey-56m15.4 si:dkey-56m15.4 39 1 1.000 - - - - - - - -
47. hs3st2 ENSDARG00000059616 2 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070202-7]
48. si:dkey-4j21.1 17 1 1.000 - - - - - - - - si:dkey-4j21.1, transcript variant X2
49. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
50. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
51. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
52. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
53. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
54. TACR3 TACR3 1 1 - - - - - - - - 1.000
55. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
56. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
57. ENSDARG00000089816 ENSDARG00000089816 4 1 - - 1.000 - - - - - -
58. CABZ01068819.1 CABZ01068819.1 20 1 - - 1.000 - - - - - -
59. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
60. cox5aa ENSDARG00000088383 21 1 - - - - - - - - 1.000 cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
61. gdf10b ENSDARG00000073891 116 1 1.000 - - - - - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
62. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
63. RCVRN_1 RCVRN_1 46 1 - - 1.000 - - - - - -
64. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
65. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
66. MAST1 MAST1 29 1 1.000 - - - - - - - -
67. BX511021.4 ENSDARG00000117436 4 1 - - - - - - - - 1.000
68. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
69. sh2d4b sh2d4b 1 1 - - - - - - - - 1.000
70. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1 1.000 - - - - - - - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
71. si:dkey-265k11.2 si:dkey-265k11.2 44 1 1.000 - - - - - - - -
72. kcng4 kcng4 37 1 1.000 - - - - - - - -
73. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
74. CU104716.1 ENSDARG00000109332 12 1 - - - - - - - - 1.000
75. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
76. mxa ENSDARG00000021688 14 1 - - - - 1.000 - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
77. ccnd3 ENSDARG00000027391 1 1 - - 1.000 - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
78. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
79. C20H2orf71 C20H2orf71 2 1 - - 1.000 - - - - - -
80. ETV3L ETV3L 67 1 - - 1.000 - - - - - -
81. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
82. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
83. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
84. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - - - - 1.000
85. sts ENSDARG00000053241 10 1 - - - - - - - - 1.000 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
86. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
87. pcdh2ab6 ENSDARG00000091043 1 1 - - 1.000 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
88. SNORD15_1 SNORD15_1 1 1 - - 1.000 - - - - - -
89. FRMPD1_2 FRMPD1_2 2 1 - - 1.000 - - - - - -
90. WASF3 WASF3 1 1 - - 1.000 - - - - - -
91. mlphb ENSDARG00000062481 14 1 1.000 - - - - - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
92. si:dkey-79c1.1 ENSDARG00000093179 11 1 1.000 - - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
93. FUT9 FUT9 91 1 1.000 - - - - - - - -
94. si:dkey-14d8.2 38 1 - - - - - - - - 1.000 si:dkey-14d8.2
95. crybb2 ENSDARG00000053512 15 1 - - 1.000 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
96. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
97. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
98. AL954698.2 ENSDARG00000102132 28 1 - - 1.000 - - - - - -
99. si:dkeyp-92c5.2 si:dkeyp-92c5.2 1 1 - - - - 1.000 - - - -
100. zgc:153151 ENSDARG00000069563 126 1 - - 1.000 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]

There are 655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA