Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pptc7b

Gene Name Gene ID Reads Annotation
pptc7b ENSDARG00000052658 1756 PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]










Genes with expression patterns similar to pptc7b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pptc7b ENSDARG00000052658 1756 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
2. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.419 - 0.777 - - - 0.862 - 0.780 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
3. CYHR1 ENSDARG00000061057 2625 2.285 - 0.716 - - - 0.798 0.771 - - cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
4. ccdc47 ENSDARG00000054362 5970 1.643 - 0.803 - - - 0.840 - - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
5. zcchc10 ENSDARG00000091092 1333 1.603 - - - - - 0.804 - 0.799 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
6. knop1 ENSDARG00000077721 2198 1.578 - 0.770 - - - - - 0.808 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
7. txn2 ENSDARG00000034777 4071 1.577 - 0.794 - - - - 0.783 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
8. pa2g4b ENSDARG00000070657 7999 1.573 - 0.818 - - - - 0.755 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
9. rnd3a ENSDARG00000076799 4705 1.565 - - - - - 0.781 - 0.784 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
10. phgdh ENSDARG00000001873 8325 1.563 - 0.784 - - - 0.779 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
11. lrpprc ENSDARG00000043970 3847 1.552 - 0.723 - - - - - 0.829 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
12. pole ENSDARG00000058533, ENSDARG00000115430 381 1.548 - - - - - 0.710 - 0.838 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
13. ap2m1b ENSDARG00000033899 317 1.542 - - - - - 0.751 - 0.791 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
14. cdc34a ENSDARG00000069708 1145 1.538 - 0.713 - - - 0.825 - - - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
15. hdgfrp2 7462 1.535 - 0.813 - - - 0.722 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
16. rnf121 ENSDARG00000060282 1809 1.528 - - - - - - 0.740 0.788 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
17. EEF1E1 ENSDARG00000071774 3806 1.526 - 0.737 - - - - 0.789 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
18. smfn ENSDARG00000009806 1280 1.524 - - - - - 0.701 - 0.823 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
19. rwdd1 ENSDARG00000015930 2380 1.524 - 0.798 - - - 0.726 - - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
20. smad1 ENSDARG00000027199, ENSDARG00000112617, ENSDARG00000115674 2791 1.524 - 0.746 - - - - 0.778 - - SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]
21. eif3m ENSDARG00000013931 8117 1.521 - 0.802 - - - - 0.719 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
22. RBM6 ENSDARG00000077060 3521 1.521 - 0.777 - - - 0.744 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
23. pelo ENSDARG00000055477 1927 1.519 - 0.737 - - - - - 0.782 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
24. mrps24 ENSDARG00000100116 1750 1.511 - 0.799 - - - - 0.712 - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
25. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.509 - 0.771 - - - - 0.738 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
26. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.504 - 0.776 - - - - 0.728 - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
27. nid1a ENSDARG00000068710 3948 1.501 - - - - - 0.742 0.759 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
28. setd3 ENSDARG00000016513 1507 1.5 - - - - - 0.765 0.735 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
29. BX248510.1 ENSDARG00000075422 1449 1.495 - 0.720 - - - - 0.775 - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
30. mical3a ENSDARG00000021979, ENSDARG00000097017 1790 1.494 - - - - - - 0.735 0.759 - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
31. plxnb1b ENSDARG00000017211 4676 1.494 - 0.730 - - - - - 0.764 - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
32. mrps9 ENSDARG00000061505 1636 1.491 - 0.788 - - - 0.703 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
33. vbp1 ENSDARG00000030241 10619 1.488 - 0.705 - - - 0.783 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
34. gpsm1b ENSDARG00000054874 1308 1.487 - 0.770 - - - 0.717 - - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
35. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.486 - - - - - 0.732 - 0.754 - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
36. grasp ENSDARG00000000588, ENSDARG00000113330 766 1.485 - 0.750 - - - 0.735 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
37. nkd1 ENSDARG00000020053 4450 1.483 - 0.783 - - - - - 0.700 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
38. hint3 ENSDARG00000074286 1015 1.482 - 0.721 - - - 0.761 - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
39. Mar-07 Mar-07 2926 1.48 - 0.733 - - - - - 0.747 -
40. utp3 ENSDARG00000056720 922 1.48 - 0.729 - - - - - 0.751 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
41. grsf1 ENSDARG00000053021 2752 1.478 - - - - - 0.739 0.739 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
42. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 1.477 - 0.712 - - - 0.765 - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
43. ireb2 ENSDARG00000021466 699 1.475 - - - - - 0.730 - 0.745 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
44. stip1 ENSDARG00000004906 7742 1.475 - - - - - 0.753 0.722 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
45. mars ENSDARG00000034396 3618 1.474 - 0.763 - - - - 0.711 - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
46. CR382298.3 CR382298.3 666 1.473 - 0.766 - - - 0.707 - - -
47. ndel1b ENSDARG00000104225, ENSDARG00000115289 782 1.465 - 0.738 - - - - 0.727 - - nudE neurodevelopment protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5889]
48. CR388231.3 ENSDARG00000105601 2404 1.463 - 0.723 - - - - - 0.740 -
49. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.462 - 0.726 - - - 0.736 - - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
50. pl10 pl10 10795 1.461 - 0.716 - - - 0.745 - - -
51. gars ENSDARG00000059070 17015 1.46 - - - - - 0.747 0.713 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
52. rcbtb2 ENSDARG00000090687 1658 1.459 - 0.743 - - - - 0.716 - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
53. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.453 - - - - - - 0.709 0.744 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
54. cul2 ENSDARG00000013965 1407 1.452 - 0.732 - - - - 0.720 - - cullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
55. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 1.45 - 0.729 - - - 0.721 - - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
56. dixdc1a ENSDARG00000025302 716 1.448 - - - - - 0.705 - 0.743 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
57. cmya5 ENSDARG00000061379 1423 1.447 - 0.723 - - - 0.724 - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
58. dnajc19 ENSDARG00000044420 1756 1.447 - 0.732 - - - - 0.715 - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
59. sarnp ENSDARG00000059357 4768 1.443 - 0.730 - - - 0.713 - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
60. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.443 - 0.742 - - - - 0.701 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
61. tprg1l ENSDARG00000068149 1605 1.443 - 0.717 - - - 0.726 - - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
62. ZNF337_25 ZNF337_25 1713 1.439 - 0.735 - - - 0.704 - - -
63. wnt3 ENSDARG00000038990, ENSDARG00000111277 626 1.434 - - - - - 0.714 - 0.720 - wingless-type MMTV integration site family, member 3 [Source:ZFIN;Acc:ZDB-GENE-081003-1]
64. coq4 ENSDARG00000104733 402 1.429 - - - - - 0.727 0.702 - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
65. cox14 ENSDARG00000092124 2229 1.428 - 0.701 - - - - - - 0.727 cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
66. ryr3 ENSDARG00000071331 6795 1.427 - 0.713 - - - - 0.714 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
67. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.426 - 0.708 - - - - - 0.718 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
68. acadm ENSDARG00000038900 2319 1.423 - - - - - 0.707 - 0.716 - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
69. slc7a6os ENSDARG00000010596 1599 1.42 - - - - - 0.712 0.708 - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
70. znf106a ENSDARG00000016651 6049 1.418 - 0.717 - - - - 0.701 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
71. auh ENSDARG00000042975 1841 1.416 - - - - - 0.711 - 0.705 - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
72. hspg2 ENSDARG00000076564 3440 1.412 - 0.708 - - - - 0.704 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
73. CRAT CRAT 521 0.924 - - - - - 0.924 - - -
74. EIF4G1_1 EIF4G1_1 3721 0.909 - 0.909 - - - - - - -
75. psmc1a ENSDARG00000030537 2799 0.897 - 0.897 - - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
76. HECW1 HECW1 1531 0.892 - - - - - - - 0.892 -
77. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 0.891 - 0.891 - - - - - - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
78. fip1l1b ENSDARG00000070431 1677 0.888 - 0.888 - - - - - - - FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
79. taf7 ENSDARG00000019572 1305 0.881 - - - - - - - 0.881 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
80. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 0.878 - - - - - - 0.878 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
81. eif3ja ENSDARG00000012603 6324 0.873 - 0.873 - - - - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
82. acin1b ENSDARG00000026842 3806 0.87 - 0.870 - - - - - - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
83. znf865 ENSDARG00000036698 15532 0.867 - 0.867 - - - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
84. tgm1l1 ENSDARG00000102106 1437 0.867 - - - - - - 0.867 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
85. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.867 - - - - - 0.867 - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
86. nucks1a ENSDARG00000078473 28285 0.866 - 0.866 - - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
87. tial1 ENSDARG00000009525 1856 0.865 - - - - - 0.865 - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
88. calcrla ENSDARG00000011473 1324 0.865 - - - - - - - 0.865 - calcitonin receptor-like a [Source:ZFIN;Acc:ZDB-GENE-040822-26]
89. dnajc5ab ENSDARG00000004836 2923 0.864 - 0.864 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
90. eif2s1a ENSDARG00000005827 5992 0.864 - 0.864 - - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
91. SENP1 SENP1 1122 0.86 - - - - - - - 0.860 -
92. igfbp5b ENSDARG00000025348 3803 0.858 - 0.858 - - - - - - - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
93. hadhab ENSDARG00000060594 3664 0.857 - - - - - - 0.857 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
94. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 0.855 - - - - - - 0.855 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
95. atp5h 18018 0.852 - 0.852 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
96. KIAA0355 3250 0.852 - - - - - - 0.852 - - KIAA0355 ortholog, transcript variant X1
97. CU462878.1 ENSDARG00000090072 352 0.852 - - - - - - - 0.852 - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
98. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 0.849 - 0.849 - - - - - - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
99. sh3glb2a ENSDARG00000008983 452 0.847 - - - - - - - 0.847 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
100. tp53bp2 tp53bp2 1969 0.847 - - - - - 0.847 - - -

There are 1259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA