Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ppp6r3

Gene Name Gene ID Reads Annotation
ppp6r3 ENSDARG00000013379 2912 protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]










Genes with expression patterns similar to ppp6r3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp6r3 ENSDARG00000013379 2912 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
2. phf12a ENSDARG00000074303 1025 2.668 - - 0.961 - - 0.763 - 0.944 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
3. arid2 ENSDARG00000007413 4413 2.439 - 0.741 0.939 - - - 0.759 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
4. ccne2 ENSDARG00000098529 4695 2.429 - - 0.937 - - 0.728 - 0.764 - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
5. paxip1 ENSDARG00000005606 1417 2.389 - 0.709 0.970 - 0.710 - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
6. u2af1 ENSDARG00000015325 3217 2.269 - 0.750 - - - - 0.780 - 0.739 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
7. crb2a ENSDARG00000060106 1307 1.903 - - 0.962 - - - - 0.941 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
8. dbx1a ENSDARG00000086393 3161 1.898 - - 0.944 - 0.954 - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
9. lpl ENSDARG00000087697 2578 1.881 - - 0.955 - - - - 0.926 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
10. NAIF1_1 NAIF1_1 1336 1.873 - - 0.965 - - - - 0.908 -
11. phc2b_1 ENSDARG00000013224 1316 1.871 - - 0.956 - - - - 0.915 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
12. ptpn13 ENSDARG00000103699 2866 1.863 - - 0.961 - - - - 0.902 - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
13. atad5a ENSDARG00000070568 1840 1.81 0.853 - 0.957 - - - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
14. rab5aa ENSDARG00000018602 8947 1.809 - - 0.876 - - - - 0.933 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
15. impdh1b ENSDARG00000029524 7472 1.805 - - 0.896 - - - - 0.909 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
16. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.784 - - 0.965 - - - 0.819 - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
17. ctnnbip1 ENSDARG00000038954 2519 1.77 - - 0.955 - - - - 0.815 - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
18. npm1b ENSDARG00000037675 5448 1.766 - - 0.872 - 0.894 - - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
19. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.766 - - 0.871 - - - - 0.895 - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
20. atf4b2 atf4b2 4734 1.759 - - - - - - 0.814 0.945 -
21. max ENSDARG00000024844 6035 1.753 - - 0.887 - - - - 0.866 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
22. slc25a3b ENSDARG00000025566 32264 1.75 - - 0.860 - - - - 0.890 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
23. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.744 - - - - - - 0.764 0.980 - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
24. xrcc5_1 ENSDARG00000099298 1533 1.728 - - 0.968 - - - 0.760 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
25. arih2 ENSDARG00000012848 7087 1.725 - - - - - - 0.777 0.948 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
26. onecutl ENSDARG00000040253 2143 1.716 0.769 - 0.947 - - - - - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
27. rpf2 ENSDARG00000043960 2719 1.701 - 0.762 0.939 - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
28. ranbp9 ENSDARG00000061048 2687 1.7 - - 0.949 - - - 0.751 - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
29. grpel1 ENSDARG00000010021 3055 1.689 - 0.773 - - - - - 0.916 - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
30. fut8 fut8 652 1.687 - - 0.958 - 0.729 - - - -
31. lgi1a ENSDARG00000020493 1218 1.687 - - 0.958 - 0.729 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
32. arfrp1 ENSDARG00000057857 2840 1.684 - - - - - - 0.715 0.969 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
33. smad4 smad4 2519 1.681 - - 0.958 - - - 0.723 - -
34. top2a ENSDARG00000024488 4273 1.677 - - - - - - - 0.933 0.744 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
35. tmem33 ENSDARG00000041332 2883 1.674 - - 0.930 - - 0.744 - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
36. CR548630.1 CR548630.1 3301 1.669 - - 0.944 - 0.725 - - - -
37. boc ENSDARG00000074335 4832 1.668 - - - - - - 0.820 0.848 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
38. rhogc ENSDARG00000028401 2671 1.665 - - 0.957 - 0.708 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
39. nlk1 ENSDARG00000006566 1123 1.652 - - - - - 0.735 - 0.917 - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
40. U6 U6 931 1.651 - - - - - - 0.709 0.942 -
41. GTSE1 ENSDARG00000013719 1115 1.647 - - - 0.725 - - - 0.922 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
42. atp6v1h ENSDARG00000006370 7028 1.646 - - 0.873 - - - 0.773 - - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
43. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.645 - - - - 0.822 - - 0.823 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
44. elmo1 ENSDARG00000098753 6966 1.642 - 0.715 - - - - - 0.927 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
45. snrpb ENSDARG00000011125 11729 1.64 - - - - - - 0.745 0.895 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
46. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.638 - - - - - - - 0.935 0.703 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
47. wrb ENSDARG00000074271, ENSDARG00000110353 970 1.637 - - - - - - 0.717 0.920 - tryptophan rich basic protein [Source:ZFIN;Acc:ZDB-GENE-030131-7696]
48. Sep-06 Sep-06 5465 1.636 - - - - - - - 0.933 0.703
49. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.629 - - - - 0.725 - - 0.904 - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
50. lbr ENSDARG00000014013 4835 1.629 - - 0.913 - - - - - 0.716 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
51. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.626 - - - - - - - 0.910 0.716 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
52. celf1 ENSDARG00000005315 5598 1.624 - 0.777 - - - - - 0.847 - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
53. ENSDARG00000087348 ENSDARG00000087348 2870 1.622 - - - - - - 0.741 0.881 -
54. c1d ENSDARG00000021112 2839 1.611 - - - - - - - 0.908 0.703 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
55. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.608 - - 0.902 - - - - 0.706 - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
56. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.607 - - - - - 0.750 - 0.857 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
57. setbp1 ENSDARG00000093799 4499 1.602 - - - - - - - 0.861 0.741 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
58. mkl1b 1408 1.594 - 0.809 - - - - 0.785 - - megakaryoblastic leukemia (translocation) 1b, transcript variant X7
59. prdm16 prdm16 1346 1.591 - - - - 0.728 - - 0.863 -
60. yth2 yth2 3716 1.586 - - - - - 0.730 - 0.856 -
61. zcchc9 ENSDARG00000007531 1748 1.578 - 0.766 - - - - 0.812 - - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
62. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.573 - - - - - - - 0.869 0.704 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
63. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.57 - 0.708 - - - - - 0.862 - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
64. minos1 ENSDARG00000101619 5273 1.569 - - 0.855 - - - - 0.714 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
65. gna11b ENSDARG00000053326 5118 1.564 - 0.727 - - - - - 0.837 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
66. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.558 - 0.720 - - - - - 0.838 - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
67. myef2 ENSDARG00000059398 6050 1.552 - - - - - - 0.733 0.819 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
68. stmn1a ENSDARG00000004169 21169 1.549 - - - - - - 0.846 - 0.703 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
69. rbmx ENSDARG00000014244 3445 1.548 - 0.810 - - - - 0.738 - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
70. nutf2l ENSDARG00000014499 3927 1.547 - - - - - 0.768 - 0.779 - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
71. smo ENSDARG00000002952 6411 1.545 - - - - 0.708 - 0.837 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
72. pcyt1aa ENSDARG00000011233 1985 1.543 - - - - - - 0.715 0.828 - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
73. MKI67 ENSDARG00000091150 11038 1.538 - - - - - - 0.783 0.755 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
74. anapc7 ENSDARG00000063005 1139 1.538 - - - - - 0.792 0.746 - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
75. smarce1 ENSDARG00000016871 9628 1.535 - - 0.827 - - - 0.708 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
76. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.532 - - - - - - 0.799 0.733 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
77. sipa1l2 ENSDARG00000061640 4545 1.532 - - - - - - - 0.829 0.703 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
78. emc6 ENSDARG00000035282 4981 1.53 0.754 0.776 - - - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
79. hipk3b ENSDARG00000062082 1248 1.525 - - - - - - 0.706 0.819 - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
80. ythdf1 ENSDARG00000016447 3391 1.514 - 0.741 - - - - 0.773 - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
81. kif22 ENSDARG00000102624 3694 1.503 - - - - 0.702 - - 0.801 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
82. alas1 ENSDARG00000021059 4892 1.502 - - - - - - 0.715 0.787 - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
83. ing5b ENSDARG00000068175 2502 1.499 - - - - 0.703 - 0.796 - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
84. SNRPG ENSDARG00000099667 18697 1.498 - 0.753 - - - - - - 0.745 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
85. xrn1 ENSDARG00000091652 2864 1.49 - - - - - 0.757 0.733 - - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
86. atf7ip ENSDARG00000069619 5495 1.485 - 0.736 - - - - 0.749 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
87. CU928061.2 CU928061.2 4550 1.482 - - - - - - 0.739 0.743 -
88. samm50 ENSDARG00000045814 4511 1.477 0.750 - - - - - - 0.727 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
89. CR382298.3 CR382298.3 666 1.467 0.762 0.705 - - - - - - -
90. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.466 - - - - 0.709 - 0.757 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
91. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.466 - - - - 0.721 - 0.745 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
92. tbl1xr1a ENSDARG00000058696 5439 1.459 - - - - - 0.734 0.725 - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
93. ppp4ca ENSDARG00000070570 8395 1.455 - - - - 0.702 - 0.753 - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
94. C2H1orf123 C2H1orf123 2344 1.454 - - - - 0.702 0.752 - - -
95. pkn2 ENSDARG00000101983 1211 1.453 - 0.710 - - - - 0.743 - - protein kinase N2 [Source:ZFIN;Acc:ZDB-GENE-061207-42]
96. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.448 0.700 - - - - - 0.748 - - cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
97. ndufa11 ENSDARG00000042777 2757 1.442 - 0.735 - - 0.707 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
98. spcs2 ENSDARG00000042823 10032 1.442 - - - - 0.701 - - 0.741 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
99. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.436 - - - - 0.728 - 0.708 - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
100. CDCA2 CDCA2 930 1.432 - - - - - 0.729 0.703 - -

There are 1214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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