Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp6c

Gene Name Gene ID Reads Annotation
ppp6c ENSDARG00000002949 2948 protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]










Genes with expression patterns similar to ppp6c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp6c ENSDARG00000002949 2948 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
2. EIF1B ENSDARG00000029445 5034 1.9 - - - 0.997 - - 0.903 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
3. alas1 ENSDARG00000021059 4892 1.809 - - - 0.998 - - 0.811 - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
4. blcap ENSDARG00000052073 8646 1.751 - - - 0.996 - - 0.755 - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
5. pcmt ENSDARG00000015201 5132 1.722 - 0.729 - 0.993 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
6. SERBP1 SERBP1 9276 1.717 - 0.724 - 0.993 - - - - -
7. cul4b ENSDARG00000060510 6053 1.692 - - - 0.990 - - 0.702 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
8. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.583 - 0.806 - - - - 0.777 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
9. ythdf1 ENSDARG00000016447 3391 1.583 0.804 0.779 - - - - - - - YTH N(6)-methyladenosine RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]
10. pom121 ENSDARG00000055113 1063 1.578 - - - - - 0.774 0.804 - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
11. rab40c ENSDARG00000061208 1072 1.546 0.734 - - - - - 0.812 - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
12. TPP2 ENSDARG00000078751 2755 1.544 - - - - - 0.761 0.783 - - tripeptidyl peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-121214-290]
13. arglu1a ENSDARG00000019223 8716 1.537 - 0.784 - - - - 0.753 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
14. nop58 ENSDARG00000104353 8497 1.53 - 0.813 - - - - 0.717 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
15. psmc3 ENSDARG00000007141 5592 1.508 - - - - - 0.714 0.794 - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
16. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.505 - - - - - 0.715 0.790 - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
17. znf865 ENSDARG00000036698 15532 1.503 - 0.704 - - - - 0.799 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
18. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.497 - - - - - 0.720 0.777 - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
19. vgll4a ENSDARG00000094332 1410 1.495 - - - - - 0.706 0.789 - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
20. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.488 - 0.784 - - - 0.704 - - - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
21. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.486 - 0.752 - - - 0.734 - - - si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
22. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.479 0.767 0.712 - - - - - - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
23. apex1 ENSDARG00000045843 6345 1.475 - 0.749 - - - - 0.726 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
24. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.474 - - - - - - 0.761 0.713 - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
25. zmat2 ENSDARG00000004956 1676 1.473 - - - - - - 0.765 - 0.708 zinc finger, matrin-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3197]
26. ube2nb ENSDARG00000045877 4583 1.47 - 0.752 - - - - 0.718 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
27. myef2 ENSDARG00000059398 6050 1.464 - 0.712 - - - - 0.752 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
28. patl1 ENSDARG00000017423 2744 1.447 - - - - - 0.724 0.723 - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
29. pwp2h ENSDARG00000037109 1395 1.444 - - 0.721 - - - 0.723 - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
30. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.427 - 0.707 - - - - 0.720 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
31. g3bp1 ENSDARG00000017741 7622 1.424 - 0.702 - - - - 0.722 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
32. atp5j 4272 1.423 - 0.708 - - - - 0.715 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
33. AMBRA1_1 AMBRA1_1 2179 0.999 - - - 0.999 - - - - -
34. C3H19orf43 C3H19orf43 2961 0.998 - - - 0.998 - - - - -
35. rerea ENSDARG00000077353 4162 0.998 - - - 0.998 - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
36. CU929431.1 CU929431.1 2234 0.998 - - - 0.998 - - - - -
37. nkrf ENSDARG00000100536 1873 0.998 - - - 0.998 - - - - - NFKB repressing factor [Source:ZFIN;Acc:ZDB-GENE-030616-73]
38. zgc:100919 zgc:100919 7746 0.997 - - - 0.997 - - - - -
39. tchp ENSDARG00000035605 1695 0.997 - - - 0.997 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
40. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.997 - - - 0.997 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
41. FAM35A FAM35A 1091 0.997 - - - 0.997 - - - - -
42. herpud2 ENSDARG00000021033 1800 0.997 - - - 0.997 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
43. mertk mertk 1232 0.997 - - - 0.997 - - - - -
44. pycr1 pycr1 1258 0.997 - - - 0.997 - - - - -
45. slc15a4 ENSDARG00000102612 1096 0.997 - - - 0.997 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
46. camkmt ENSDARG00000095224 1204 0.997 - - - 0.997 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
47. dre-mir-26a-2 ENSDARG00000086601 1267 0.997 - - - 0.997 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
48. EPT1 EPT1 1912 0.997 - - - 0.997 - - - - -
49. b3gnt5b ENSDARG00000004396 1152 0.997 - - - 0.997 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
50. hoxb4a ENSDARG00000013533 3857 0.997 - - - 0.997 - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
51. mpi ENSDARG00000030786 3052 0.997 - - - 0.997 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
52. camsap2 camsap2 1448 0.997 - - - 0.997 - - - - -
53. pnpla7a ENSDARG00000062986 1793 0.997 - - - 0.997 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
54. serbp1a ENSDARG00000074242 10818 0.996 - - - 0.996 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
55. ARHGAP23 ARHGAP23 3946 0.996 - - - 0.996 - - - - -
56. fermt2 ENSDARG00000020242 9351 0.996 - - - 0.996 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
57. CR388095.3 CR388095.3 2548 0.996 - - - 0.996 - - - - -
58. idh3g ENSDARG00000023648 4877 0.996 - - - 0.996 - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
59. CU463857.1 CU463857.1 5541 0.996 - - - 0.996 - - - - -
60. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.996 - - - 0.996 - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
61. rhoae rhoae 4047 0.996 - - - 0.996 - - - - -
62. map3k1 ENSDARG00000098405 3043 0.996 - - - 0.996 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
63. dcxr ENSDARG00000079271 3289 0.996 - - - 0.996 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
64. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 0.995 - - - 0.995 - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
65. prpf40a ENSDARG00000058467 6565 0.995 - - - 0.995 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
66. ADAMTS3 ENSDARG00000060127 2839 0.995 - - - 0.995 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
67. gap43 ENSDARG00000099744 4114 0.994 - - - 0.994 - - - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
68. acsl3b ENSDARG00000014674 3748 0.994 - - - 0.994 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
69. txndc5 ENSDARG00000009342 5387 0.994 - - - 0.994 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
70. slmo2 slmo2 5559 0.993 - - - 0.993 - - - - -
71. CNDP1 CNDP1 6456 0.993 - - - 0.993 - - - - -
72. AGO1 ENSDARG00000092644 4521 0.993 - - - 0.993 - - - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
73. smc1al ENSDARG00000058203 8838 0.993 - - - 0.993 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
74. tox ENSDARG00000032317 9126 0.992 - - - 0.992 - - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
75. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.992 - - - 0.992 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
76. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 0.991 - - - 0.991 - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
77. tuba1c ENSDARG00000055216 8384 0.988 - - - 0.988 - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
78. myom1a ENSDARG00000061249 10230 0.985 - - - 0.985 - - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
79. tomm5 ENSDARG00000068265 11813 0.985 - - - 0.985 - - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
80. eif2s3 ENSDARG00000008292 17051 0.975 - - - 0.975 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
81. fahd2a ENSDARG00000103759 9581 0.975 - - - 0.975 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
82. serpina1 ENSDARG00000090286 8108 0.974 - - - 0.974 - - - - - serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
83. hmgb1b ENSDARG00000030479 10398 0.974 - - - 0.974 - - - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
84. col18a1 col18a1 20555 0.97 - - - 0.970 - - - - -
85. rpl13 ENSDARG00000099380 20663 0.966 - - - 0.966 - - - - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
86. zgc:56493 ENSDARG00000031435 33407 0.963 - - - 0.963 - - - - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
87. ywhabb ENSDARG00000075758 23104 0.96 - - - 0.960 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
88. eif1b ENSDARG00000012688 34711 0.954 - - - 0.954 - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
89. rpl5a ENSDARG00000020197 35209 0.934 - - - 0.934 - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
90. rbm4.3 ENSDARG00000022129 28571 0.916 - - - 0.916 - - - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
91. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.91 - 0.910 - - - - - - -
92. tceb1b 14935 0.902 - - - 0.902 - - - - - transcription elongation factor B (SIII), polypeptide 1b
93. chd4b ENSDARG00000025789 14299 0.901 - - - 0.901 - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
94. mcm2 ENSDARG00000102798 8148 0.899 - - - 0.899 - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
95. UBC ENSDARG00000102632 39051 0.884 - - - 0.884 - - - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
96. pcca ENSDARG00000028982, ENSDARG00000110281 3212 0.877 - 0.877 - - - - - - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
97. grb2b ENSDARG00000038059 9050 0.868 - - - - - - 0.868 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
98. rps29 ENSDARG00000041232 71334 0.868 - - - 0.868 - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
99. ubr5 ENSDARG00000018192 9267 0.867 - - - - - - 0.867 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
100. pabpc1a ENSDARG00000017219 95045 0.864 - - - 0.864 - - - - - poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]

There are 545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA