Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp4r1

Gene Name Gene ID Reads Annotation
ppp4r1 ENSDARG00000101316 1 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]










Genes with expression patterns similar to ppp4r1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp4r1 ENSDARG00000101316 1 2 - - - 1.000 - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
2. si:dkey-9a20.8 si:dkey-9a20.8 8 2 - - - 1.000 - - - - 1.000
3. CABZ01021435.3 CABZ01021435.3 5 1.764 - - - 0.764 - - - - 1.000
4. fam19a1 7 1.743 - - - 0.743 - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
5. pou4f3 ENSDARG00000006206 8 1.564 - - - 0.743 - - - - 0.821 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
6. zgc:174180 ENSDARG00000098677, ENSDARG00000101389 5 1 - - - - - - - - 1.000 zgc:174180 [Source:ZFIN;Acc:ZDB-GENE-080206-1]
7. GRIK2 ENSDARG00000113771 3 1 - - - 1.000 - - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
8. usp53b ENSDARG00000076499 16 1 - - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
9. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
10. CABZ01019905.2 CABZ01019905.2 1 1 - - - - - - - - 1.000
11. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
12. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
13. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
14. zgc:153116 ENSDARG00000077205 7 1 - - - 1.000 - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
15. prdm11 ENSDARG00000074468 2 1 - - - - - - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
16. gper gper 4 1 - - - 1.000 - - - - -
17. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
18. AL929192.2 AL929192.2 0 1 - - - 1.000 - - - - -
19. BX572077.3 BX572077.3 20 1 - - - 1.000 - - - - -
20. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
21. WNK4 WNK4 0 1 - - - - - - - - 1.000
22. EXT1_1 EXT1_1 3 1 - - - 1.000 - - - - -
23. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
24. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
25. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
26. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
27. si:ch211-113a14.17 15 1 - - - - - - - - 1.000 si:ch211-113a14.17
28. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
29. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
30. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - - - - 1.000 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
31. XRCC2 ENSDARG00000013933 15 1 - - - - - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
32. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
33. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
34. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - - - - - - - 1.000
35. adarb2 ENSDARG00000071823 1 1 - - - - - - - - 1.000 adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
36. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - - 1.000
37. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - - - - - 1.000 si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
38. CMA1_13 CMA1_13 0 1 - - - - - - - - 1.000
39. si:dkey-30c15.12 ENSDARG00000058546 12 1 - - - - - - - - 1.000 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
40. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
41. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
42. snR50 snR50 1 1 - - - - - - - - 1.000
43. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
44. mib mib 1 1 - - - - - - - - 1.000
45. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
46. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
47. cd4 cd4 4 1 - - - 1.000 - - - - -
48. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
49. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
50. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
51. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
52. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
53. C2CD4C C2CD4C 4 1 - - - - - - - - 1.000
54. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
55. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
56. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
57. CR846080.4 CR846080.4 6 1 - - - - - - - - 1.000
58. CR812472.3 ENSDARG00000109834 0 1 - - - - - - - - 1.000 platelet-derived growth factor beta polypeptide b [Source:NCBI gene;Acc:796490]
59. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - - - - 1.000
60. BX649314.1 BX649314.1 3 1 - - - - - - - - 1.000
61. neurod2 ENSDARG00000016854 6 1 - - - 1.000 - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
62. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
63. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - 1.000 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
64. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
65. CT573264.1 ENSDARG00000110089 0 1 - - - - - - - - 1.000
66. si:ch211-269m17.1 si:ch211-269m17.1 1 1 - - - - - - - - 1.000
67. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
68. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - - - - 1.000
69. CU855899.1 CU855899.1 2 1 - - - - - - - - 1.000
70. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - 1.000 - - - - -
71. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
72. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
73. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
74. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
75. CR631122.1 ENSDARG00000044534 8 1 - - - - - - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
76. U5 U5 0 1 - - - 1.000 - - - - -
77. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
78. MYO9B_1 ENSDARG00000078313 1 1 - - - - - - - - 1.000 myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
79. calhm3 ENSDARG00000079602 4 1 - - - 1.000 - - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
80. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
81. tmem167b ENSDARG00000059400 9 1 - - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
82. TNFRSF14_1 TNFRSF14_1 165 1 - - - - - - - - 1.000
83. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
84. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
85. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
86. mgat4a ENSDARG00000063330 3 1 - - - - - - - - 1.000 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
87. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
88. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - - 1.000 si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
89. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - - - - - - - 1.000
90. DIAPH2 ENSDARG00000076060 1 1 - - - - - - - - 1.000 diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
91. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
92. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
93. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - - - - 1.000
94. sts ENSDARG00000053241 10 1 - - - - - - - - 1.000 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
95. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
96. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
97. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
98. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
99. CU104716.1 ENSDARG00000109332 12 1 - - - - - - - - 1.000
100. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]

There are 151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA