Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp4r1

Gene Name Gene ID Reads Annotation
ppp4r1 ENSDARG00000101316 1 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]










Genes with expression patterns similar to ppp4r1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-9a20.8 si:dkey-9a20.8 8 2 - - - 1.000 - - - - 1.000
2. ppp4r1 ENSDARG00000101316 1 2 - - - 1.000 - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
3. CABZ01021435.3 CABZ01021435.3 5 1.764 - - - 0.764 - - - - 1.000
4. fam19a1 7 1.743 - - - 0.743 - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
5. pou4f3 ENSDARG00000006206 8 1.564 - - - 0.743 - - - - 0.821 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
6. zgc:174180 ENSDARG00000098677, ENSDARG00000101389 5 1 - - - - - - - - 1.000 zgc:174180 [Source:ZFIN;Acc:ZDB-GENE-080206-1]
7. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - - - - 1.000 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
8. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
9. usp53b ENSDARG00000076499 16 1 - - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
10. GRIK2 ENSDARG00000113771 3 1 - - - 1.000 - - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
11. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
12. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
13. TNFRSF14_1 TNFRSF14_1 165 1 - - - - - - - - 1.000
14. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
15. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
16. AL929192.2 AL929192.2 0 1 - - - 1.000 - - - - -
17. C2CD4C C2CD4C 4 1 - - - - - - - - 1.000
18. BX664622.1 ENSDARG00000101754 39 1 - - - - - - - - 1.000
19. U4_1 U4_1 2 1 - - - - - - - - 1.000
20. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
21. snR50 snR50 1 1 - - - - - - - - 1.000
22. CU694952.2 CU694952.2 3 1 - - - 1.000 - - - - -
23. MYO9B_1 ENSDARG00000078313 1 1 - - - - - - - - 1.000 myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
24. mgat4a ENSDARG00000063330 3 1 - - - - - - - - 1.000 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
25. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
26. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
27. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - 1.000 - - - - -
28. CU104716.1 ENSDARG00000109332 12 1 - - - - - - - - 1.000
29. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
30. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
31. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
32. CT573264.1 ENSDARG00000110089 0 1 - - - - - - - - 1.000
33. twsg1b 7 1 - - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
34. CR812472.3 ENSDARG00000109834 0 1 - - - - - - - - 1.000 platelet-derived growth factor beta polypeptide b [Source:NCBI gene;Acc:796490]
35. ampd2 ampd2 6 1 - - - 1.000 - - - - -
36. si:dkey-14d8.2 38 1 - - - - - - - - 1.000 si:dkey-14d8.2
37. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
38. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
39. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
40. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
41. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
42. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
43. adarb2 ENSDARG00000071823 1 1 - - - - - - - - 1.000 adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
44. CABZ01019905.2 CABZ01019905.2 1 1 - - - - - - - - 1.000
45. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
46. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
47. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
48. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
49. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
50. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
51. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
52. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - - - - 1.000
53. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
54. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
55. CR846080.4 CR846080.4 6 1 - - - - - - - - 1.000
56. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
57. itpr2 ENSDARG00000011909 3 1 - - - - - - - - 1.000 inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
58. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
59. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 - - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
60. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
61. U5 U5 0 1 - - - 1.000 - - - - -
62. si:dkey-30c15.12 ENSDARG00000058546 12 1 - - - - - - - - 1.000 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
63. calhm3 ENSDARG00000079602 4 1 - - - 1.000 - - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
64. si:ch211-113a14.17 15 1 - - - - - - - - 1.000 si:ch211-113a14.17
65. nfixb ENSDARG00000061836 7 1 - - - 1.000 - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
66. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
67. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
68. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
69. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
70. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - - - - - - - 1.000
71. prdm11 ENSDARG00000074468 2 1 - - - - - - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
72. BX649314.1 BX649314.1 3 1 - - - - - - - - 1.000
73. CR388152.1 CR388152.1 7 1 - - - - - - - - 1.000
74. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
75. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
76. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
77. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
78. si:ch211-269m17.1 si:ch211-269m17.1 1 1 - - - - - - - - 1.000
79. BX511021.4 ENSDARG00000117436 4 1 - - - - - - - - 1.000
80. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
81. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - - 1.000 si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
82. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
83. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
84. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
85. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
86. CMA1_13 CMA1_13 0 1 - - - - - - - - 1.000
87. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
88. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
89. arl11l arl11l 31 1 - - - 1.000 - - - - -
90. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
91. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
92. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - - - - - 1.000 si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
93. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
94. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
95. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
96. RAB35 RAB35 4 1 - - - - - - - - 1.000
97. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
98. WNK4 WNK4 0 1 - - - - - - - - 1.000
99. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
100. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - 1.000 - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]

There are 151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA