Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1r3db

Gene Name Gene ID Reads Annotation
ppp1r3db ENSDARG00000076248 32 protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]










Genes with expression patterns similar to ppp1r3db

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1r3db ENSDARG00000076248 32 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
2. CCDC88A_1 CCDC88A_1 12 2.495 - - - 0.760 - 1.000 0.735 - -
3. CABZ01026370.1 CABZ01026370.1 286 2.352 0.849 0.797 - - - - 0.706 - -
4. fabp10a ENSDARG00000038439 4 2 - 1.000 - - - 1.000 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
5. cthrc1b ENSDARG00000001971 44 1.957 0.957 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
6. kirrel3a ENSDARG00000075806 36 1.875 1.000 - - - - 0.875 - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
7. LRP3 ENSDARG00000008485 1401 1.844 - 1.000 - - - 0.844 - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
8. si:ch211-237l4.6 ENSDARG00000056915 49 1.828 0.957 - - - - 0.871 - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
9. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.804 - 1.000 - - - 0.804 - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
10. wu:fe11b02_1 wu:fe11b02_1 7 1.795 0.957 - - 0.838 - - - - -
11. RECK ENSDARG00000090039 15 1.768 - 1.000 - - - - 0.768 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
12. grin2ab ENSDARG00000070543 31 1.763 0.957 - - - - - 0.806 - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
13. GFOD1 ENSDARG00000061363 67 1.759 0.968 - - - - 0.791 - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
14. slc12a5b ENSDARG00000078187 329 1.751 0.751 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
15. RGS9BP ENSDARG00000086756 65 1.735 - 1.000 - - - - 0.735 - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
16. si:dkey-156m18.1 si:dkey-156m18.1 13 1.734 - 0.896 - 0.838 - - - - -
17. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.733 0.733 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
18. SLC16A1 SLC16A1 37 1.731 - 0.731 - - - 1.000 - - -
19. KCNJ6 ENSDARG00000058985 71 1.719 0.719 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
20. rapgef3 ENSDARG00000079291 69 1.718 0.957 0.761 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
21. NACC1 NACC1 9 1.714 - 1.000 - - 0.714 - - - -
22. SNORD88 SNORD88 232 1.713 - 0.713 - - - 1.000 - - -
23. si:dkey-157g16.6 ENSDARG00000057062 12 1.701 - 1.000 - - - - - - 0.701 si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
24. si:dkey-187i8.2 ENSDARG00000096624 8 1.701 - 1.000 - - - - - - 0.701 si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
25. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.691 0.770 0.921 - - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
26. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.674 0.957 - - - - 0.717 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
27. BX324003.1 ENSDARG00000096499 50 1.633 0.825 - - - - 0.808 - - -
28. PLCXD1_3 PLCXD1_3 35 1.59 0.826 - - 0.764 - - - - -
29. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.57 - 0.802 - - - - 0.768 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
30. socs1a ENSDARG00000038095 20 1.566 - - - - - 0.798 0.768 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
31. BX005256.5 BX005256.5 25 1.565 - - - 0.838 - - 0.727 - -
32. si:ch211-132g1.6 ENSDARG00000093102 13 1.525 - - - - - 0.737 - - 0.788 si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
33. GPR78 GPR78 17 1.502 - - - 0.798 - - - - 0.704
34. COBLL1_1 COBLL1_1 787 1.492 - 0.754 - - - - 0.738 - -
35. MXRA5 MXRA5 58 1.484 - 0.716 - - - - 0.768 - -
36. CABZ01080142.1 CABZ01080142.1 52 1.476 - 0.763 - - - - - - 0.713
37. SLC9B1 SLC9B1 137 1.472 - 0.704 - - - - 0.768 - -
38. APEH ENSDARG00000008703 73 1.448 - 0.731 - - - 0.717 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
39. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
40. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
41. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
42. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
43. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
44. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
45. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
46. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
47. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
48. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
49. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
50. ifit2 ifit2 11 1 - - - - - 1.000 - - -
51. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
52. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
53. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
54. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
55. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
56. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
57. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
58. c3c c3c 174 1 - 1.000 - - - - - - -
59. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
60. sprn ENSDARG00000056004 128 1 - 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
61. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
62. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
63. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
64. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
65. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
66. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
67. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
68. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
69. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
70. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
71. klhl6 ENSDARG00000026990 24 1 - 1.000 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
72. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
73. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
74. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
75. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
76. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
77. fbxo41 ENSDARG00000078908 95 1 - 1.000 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
78. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
79. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
80. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
81. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
82. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
83. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
84. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
85. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
86. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
87. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
88. CT955987.1 CT955987.1 9 1 - 1.000 - - - - - - -
89. BX470224.1 ENSDARG00000092793 22 1 - 1.000 - - - - - - -
90. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
91. lzts1 ENSDARG00000075565 23 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
92. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
93. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
94. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
95. BPHL ENSDARG00000102877 28 1 - - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
96. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
97. CR376785.2 CR376785.2 175 1 - 1.000 - - - - - - -
98. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
99. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
100. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]

There are 984 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA