Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1r3ca

Gene Name Gene ID Reads Annotation
ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]










Genes with expression patterns similar to ppp1r3ca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
2. DNAJA4 ENSDARG00000051762 5657 2.702 0.883 0.835 - - 0.984 - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
3. CU571255.1 CU571255.1 902 2.571 - 0.706 0.880 - - 0.985 - - -
4. CLDN23 CLDN23 2002 2.538 0.899 - 0.701 - - 0.938 - - -
5. ncl ENSDARG00000002710 16951 2.377 0.753 0.847 - - 0.777 - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
6. nrf1 ENSDARG00000000018 4683 1.958 - - - - 0.982 0.976 - - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
7. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.954 0.974 - - - - 0.980 - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
8. stk38a ENSDARG00000019973 1343 1.953 0.970 - - - - 0.983 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
9. cplx4b ENSDARG00000059486 3192 1.919 0.929 - - - - 0.990 - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
10. chmp2bb ENSDARG00000002190 4629 1.894 0.956 - - - - 0.938 - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
11. zfyve21 ENSDARG00000027887 1687 1.884 - - 0.890 - 0.994 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
12. gpx4b ENSDARG00000076836 8085 1.877 0.916 - - - - 0.961 - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
13. cacna2d1a ENSDARG00000014804 1924 1.854 - 0.874 - - - 0.980 - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
14. pelo ENSDARG00000055477 1927 1.841 0.928 - 0.913 - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
15. ITCH ITCH 1226 1.838 - 0.846 - - - 0.992 - - -
16. ssu72 ENSDARG00000031216 2350 1.834 - - 0.849 - - 0.985 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
17. smim7 ENSDARG00000074848 1260 1.833 - - 0.851 - - 0.982 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
18. camk2a ENSDARG00000053617 950 1.822 - 0.830 - - 0.992 - - - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
19. foxc1b ENSDARG00000055398 1499 1.822 - 0.836 - - 0.986 - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
20. wu:fq41a10 wu:fq41a10 7009 1.809 0.873 - - - - 0.936 - - -
21. snrnp70 ENSDARG00000077126 5921 1.809 - 0.821 - - 0.988 - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
22. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.802 0.951 - - - 0.851 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
23. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.801 0.939 - - - - 0.862 - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
24. mybphb ENSDARG00000003081 5208 1.795 0.921 0.874 - - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
25. stmn1a ENSDARG00000004169 21169 1.794 - - - - 0.833 0.961 - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
26. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.787 - - 0.814 - - 0.973 - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
27. mgst2 ENSDARG00000071345 5626 1.786 0.843 - - - - 0.943 - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
28. lama5 ENSDARG00000058543 2782 1.785 0.944 - 0.841 - - - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
29. itgb1bp1 ENSDARG00000007169 2723 1.784 - - - - 0.987 - 0.797 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
30. zgc:66479 ENSDARG00000008732 3347 1.782 0.957 0.825 - - - - - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
31. fbxl22 ENSDARG00000096995 1290 1.78 - 0.797 - - - 0.983 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
32. ahcyl2 ENSDARG00000039343 1210 1.779 0.986 0.793 - - - - - - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
33. zgc:66448 ENSDARG00000022952 1045 1.777 0.973 0.804 - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
34. farsa ENSDARG00000098825 2813 1.773 0.954 0.819 - - - - - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
35. ube2e1 ENSDARG00000116649 10656 1.771 0.920 - - - 0.851 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
36. tead3a ENSDARG00000074321 2240 1.76 0.970 - 0.790 - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
37. col4a6 ENSDARG00000052061 8636 1.759 0.817 - - - 0.942 - - - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
38. dnajc5ab ENSDARG00000004836 2923 1.759 - 0.770 - - - 0.989 - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
39. ktn1 ENSDARG00000032802 6251 1.751 - - - - - 0.944 0.807 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
40. dnajc15 ENSDARG00000038309 1274 1.75 - 0.757 - - - 0.993 - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
41. plscr3b ENSDARG00000069432 8500 1.75 - - - - 0.835 0.915 - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
42. styk1 1199 1.75 - - 0.787 - - 0.963 - - - serine/threonine/tyrosine kinase 1
43. mrps24 ENSDARG00000100116 1750 1.743 0.969 0.774 - - - - - - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
44. slc47a1 ENSDARG00000046012 1426 1.742 - - 0.786 - 0.956 - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
45. aurkaip1 ENSDARG00000074985 2214 1.741 0.975 - 0.766 - - - - - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
46. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.74 0.974 0.766 - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
47. C13H9orf72 C13H9orf72 2310 1.74 - 0.758 - - - 0.982 - - -
48. zgc:158296 ENSDARG00000070923 3935 1.734 0.895 0.839 - - - - - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
49. tmed7 ENSDARG00000046022 2435 1.733 - - - - - 0.986 0.747 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
50. gfpt2 ENSDARG00000044094 2503 1.728 0.854 - - - - 0.874 - - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
51. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.724 - - - - - 0.980 0.744 - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
52. psmc2 ENSDARG00000020101 8095 1.721 - - - - - 0.978 0.743 - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
53. ext2 ENSDARG00000056648 1322 1.72 0.979 - - - - - 0.741 - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
54. ccng2 ENSDARG00000017602 3141 1.719 - - 0.753 - - 0.966 - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
55. col27a1a 1747 1.719 0.976 0.743 - - - - - - - collagen, type XXVII, alpha 1a
56. ryr1b ENSDARG00000023797 5693 1.719 0.819 0.900 - - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
57. suv420h1 1810 1.714 - - - - - 0.992 0.722 - - suppressor of variegation 4-20 homolog 1 (Drosophila)
58. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.711 0.825 - - - - 0.886 - - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
59. plecb ENSDARG00000021987 13621 1.71 - 0.857 - - - 0.853 - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
60. si:ch211-22i13.2 ENSDARG00000043485 4719 1.71 - 0.746 - - 0.964 - - - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
61. dusp8a ENSDARG00000009299 1302 1.709 - - - - - 0.985 0.724 - - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
62. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.708 - - - - - 0.990 0.718 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
63. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.707 - 0.729 - - - 0.978 - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
64. pygmb ENSDARG00000013317 5454 1.706 0.956 0.750 - - - - - - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
65. CORO1C CORO1C 5554 1.703 - 0.729 - - 0.974 - - - -
66. SYDE2 ENSDARG00000099479 1891 1.703 - - 0.865 - - - 0.838 - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
67. prox1a ENSDARG00000055158 1411 1.702 - - - - 0.993 - 0.709 - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
68. cahz ENSDARG00000011166 5771 1.698 0.943 0.755 - - - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
69. rpa2 ENSDARG00000037188 4284 1.695 - 0.709 - - - 0.986 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
70. APOD APOD 3404 1.695 - - 0.711 - - 0.984 - - -
71. nkd1 ENSDARG00000020053 4450 1.694 - 0.706 - - - 0.988 - - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
72. pygma ENSDARG00000055518 15972 1.694 - 0.869 - - - 0.825 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
73. ankrd13c ENSDARG00000103831 3593 1.691 - - 0.709 - 0.982 - - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
74. copz2 ENSDARG00000006786, ENSDARG00000112084 4375 1.69 - - 0.704 - - 0.986 - - - coatomer protein complex, subunit zeta 2 [Source:ZFIN;Acc:ZDB-GENE-000406-5]
75. adss ENSDARG00000002071 5497 1.69 - - - 0.702 - 0.988 - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
76. gspt1l ENSDARG00000098627 8381 1.689 - - - - - 0.969 0.720 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
77. cx43 ENSDARG00000041799 2212 1.679 0.976 0.703 - - - - - - - connexin 43 [Source:ZFIN;Acc:ZDB-GENE-991105-4]
78. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.679 0.967 0.712 - - - - - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
79. akt1s1 ENSDARG00000074667 3795 1.677 - - - - - 0.974 0.703 - - AKT1 substrate 1 (proline-rich) [Source:ZFIN;Acc:ZDB-GENE-030131-482]
80. si:ch73-308b14.1 si:ch73-308b14.1 1106 1.671 - 0.794 0.877 - - - - - -
81. myf6 ENSDARG00000029830 1911 1.666 - 0.711 - - - 0.955 - - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
82. zgc:112964 ENSDARG00000101200 4751 1.662 0.765 - - - - 0.897 - - - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
83. hnrpl 6412 1.649 0.932 - - - - - 0.717 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
84. ccdc47 ENSDARG00000054362 5970 1.645 0.825 - - - - - 0.820 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
85. psmc1a ENSDARG00000030537 2799 1.642 - 0.890 0.752 - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
86. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.637 - 0.757 0.880 - - - - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
87. eif2s3 ENSDARG00000008292 17051 1.632 - 0.750 - - - 0.882 - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
88. pfdn4 ENSDARG00000061228 8266 1.628 0.920 - - - - - 0.708 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
89. atp5o 10343 1.612 0.841 - - - - - 0.771 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
90. f11r f11r 16668 1.604 0.845 - - - 0.759 - - - -
91. vwde ENSDARG00000103443 5758 1.599 - 0.875 - 0.724 - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
92. mphosph10 ENSDARG00000012495 1679 1.599 - 0.701 0.898 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
93. lamb2 ENSDARG00000002084 3265 1.595 - 0.883 - 0.712 - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
94. anp32e ENSDARG00000054804 11017 1.594 - 0.740 - - - - 0.854 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
95. src ENSDARG00000008107 3643 1.594 - 0.780 0.814 - - - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
96. cog2 ENSDARG00000004037 462 1.594 - 0.727 0.867 - - - - - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
97. alpk3a ENSDARG00000078989 1992 1.59 - 0.821 - 0.769 - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
98. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.587 - - 0.863 - - - 0.724 - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
99. ube2i ube2i 13024 1.576 0.853 - - - - - 0.723 - -
100. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.574 - 0.790 0.784 - - - - - -

There are 1704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA