Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1r3b

Gene Name Gene ID Reads Annotation
ppp1r3b ENSDARG00000044691, ENSDARG00000110639, ENSDARG00000114900 2990 protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]










Genes with expression patterns similar to ppp1r3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1r3b ENSDARG00000044691, ENSDARG00000110639, ENSDARG00000114900 2990 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]
2. mrpl12 ENSDARG00000038768 5539 2.387 0.701 0.828 - - - - 0.858 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
3. acp1 ENSDARG00000076486 3275 1.79 - 0.859 - - - - 0.931 - - acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
4. VPS37B_1 VPS37B_1 1816 1.746 - 0.862 - - - - 0.884 - -
5. fzr1 fzr1 2984 1.727 - 0.882 - - - - 0.845 - -
6. Mar-07 Mar-07 2926 1.699 - 0.819 - - - - 0.880 - -
7. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.698 - 0.816 - - - - 0.882 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
8. cdkn2aipnl ENSDARG00000053395 5107 1.697 - 0.824 - - - - 0.873 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
9. arpc4l ENSDARG00000058225 10107 1.696 - - - - - 0.781 0.915 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
10. pes ENSDARG00000018902 3286 1.687 - 0.839 - - - - 0.848 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
11. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.681 - 0.762 - - - - 0.919 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
12. ap1s1 ENSDARG00000056803 3854 1.67 - 0.773 - - - - 0.897 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
13. nmt1a ENSDARG00000052966 5918 1.668 - 0.799 - - - - 0.869 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
14. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.664 - 0.780 - - - - 0.884 - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
15. EML4_1 EML4_1 8736 1.655 - 0.837 - - - - 0.818 - -
16. crtap ENSDARG00000018010 7722 1.654 - 0.770 - - - - 0.884 - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
17. DYNC1I2 DYNC1I2 4131 1.65 - 0.753 - - - - 0.897 - -
18. si:ch211-196l7.4 ENSDARG00000095451 3766 1.643 0.760 - - - - - 0.883 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
19. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.641 - - - - - 0.738 0.903 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
20. sp3b ENSDARG00000007812 2928 1.639 - 0.730 - - - - 0.909 - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
21. ppargc1a ENSDARG00000067829 772 1.637 - 0.796 - - - - 0.841 - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
22. si:ch211-22i13.2 ENSDARG00000043485 4719 1.637 - 0.813 - - - - 0.824 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
23. hnrpkl ENSDARG00000007034 4660 1.631 - 0.765 - - - - 0.866 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
24. cul1b ENSDARG00000007691 719 1.63 - 0.775 - - - - 0.855 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
25. SEMA4B SEMA4B 1259 1.628 - 0.779 - - - - 0.849 - -
26. socs5a ENSDARG00000100717 6927 1.627 - 0.776 - - - - 0.851 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
27. snrnp70 ENSDARG00000077126 5921 1.625 - 0.801 - - - - 0.824 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
28. ndufa6 ENSDARG00000038028 2653 1.623 - 0.773 - - - - 0.850 - - NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
29. plekhh1 ENSDARG00000053835 2123 1.599 - 0.762 - - - - 0.837 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
30. btf3l4_1 ENSDARG00000089681 1089 1.598 - 0.762 - - - - 0.836 - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
31. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.597 - 0.741 - - - - 0.856 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
32. COL13A1 1565 1.595 - 0.735 - - - - 0.860 - - collagen, type XIII, alpha 1, transcript variant X1
33. pcyt1aa ENSDARG00000011233 1985 1.593 0.729 0.864 - - - - - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
34. papolg ENSDARG00000012141 1445 1.59 - 0.751 - - - - 0.839 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
35. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.589 - - - - - 0.708 0.881 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
36. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.588 - 0.743 - - - - 0.845 - -
37. sf3b4 ENSDARG00000018574 7470 1.581 - 0.734 - - - - 0.847 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
38. kmt2a ENSDARG00000004537 2169 1.58 - 0.722 - - - - 0.858 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
39. RAMP1 RAMP1 736 1.579 - 0.700 - - - - 0.879 - -
40. ppm1g ENSDARG00000075559 6516 1.575 - 0.815 - - - - 0.760 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
41. lats2 ENSDARG00000078864, ENSDARG00000115103 2063 1.573 - 0.729 - - - 0.844 - - - large tumor suppressor kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050119-6]
42. nup107 ENSDARG00000016010 1043 1.57 - 0.706 - - - - 0.864 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
43. si:dkey-82i20.5 ENSDARG00000116717 2965 1.559 - 0.712 - - - - 0.847 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
44. TCEB3 2429 1.548 - 0.794 - - - 0.754 - - - transcription elongation factor B (SIII), polypeptide 3
45. krcp ENSDARG00000040224 5961 1.548 - 0.708 - - - - 0.840 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
46. acn9 acn9 520 1.544 - 0.703 - - - - 0.841 - -
47. eftud2 ENSDARG00000012261 3081 1.542 - 0.716 - - - - 0.826 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
48. drap1 ENSDARG00000041203 6749 1.527 - 0.717 - - - - 0.810 - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
49. ppdpfb ENSDARG00000031317 12820 1.507 - - - - - 0.751 0.756 - - pancreatic progenitor cell differentiation and proliferation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-8247]
50. surf4 ENSDARG00000104647 4203 1.505 - 0.719 - - - 0.786 - - - surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
51. src ENSDARG00000008107 3643 1.498 - 0.734 - - - 0.764 - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
52. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.497 0.749 0.748 - - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
53. copa ENSDARG00000004173 3977 1.47 - 0.702 - - - 0.768 - - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
54. foxa1 ENSDARG00000102138 1797 1.46 - 0.752 - - - 0.708 - - - forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
55. cast ENSDARG00000058693 15565 1.457 - - - - - 0.746 0.711 - - calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
56. arpc5lb ENSDARG00000035433 726 1.436 - 0.722 - 0.714 - - - - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
57. TSPAN4 TSPAN4 941 1.432 - 0.728 - - - 0.704 - - -
58. gpcpd1 ENSDARG00000016011 2563 1.429 - - - - - 0.723 0.706 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
59. ccdc85b ENSDARG00000061543 1309 1.426 0.719 0.707 - - - - - - - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
60. fam213aa 1986 0.929 - - - - - - 0.929 - - family with sequence similarity 213, member Aa
61. cope ENSDARG00000018562 17276 0.925 - - - - - - 0.925 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
62. SHISA4 ENSDARG00000006307, ENSDARG00000112041 4884 0.925 - - - - - - 0.925 - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
63. zgc:63587 ENSDARG00000017140 8399 0.924 - - - - - - 0.924 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
64. tpd52l2b ENSDARG00000013655 9460 0.918 - - - - - - 0.918 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
65. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 0.914 - - - - - - 0.914 - - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
66. scaf11 ENSDARG00000045885 3531 0.914 - - - - - - 0.914 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
67. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 0.912 - 0.912 - - - - - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
68. ak2 ENSDARG00000005926 7598 0.91 - - - - - - 0.910 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
69. ppiab ENSDARG00000103994 47491 0.909 - - - - - - 0.909 - - peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
70. eif2ak3 ENSDARG00000062139 3276 0.908 - - - - - - 0.908 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
71. supt4h1 ENSDARG00000113969 1024 0.908 - - - - - - 0.908 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
72. zgc:165653 ENSDARG00000104713 1603 0.907 - - - - - - 0.907 - - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
73. FAM110D FAM110D 3632 0.907 - - - - - - 0.907 - -
74. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 0.907 - 0.907 - - - - - - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
75. tyms ENSDARG00000042894 3068 0.906 - - - - - - 0.906 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
76. znf385a ENSDARG00000009899 3433 0.905 - - - - - - 0.905 - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
77. rab2a ENSDARG00000020261 24540 0.904 - - - - - - 0.904 - - RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
78. col6a1 ENSDARG00000074908 2339 0.904 - - - - - - 0.904 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
79. ube2e1 ENSDARG00000116649 10656 0.902 - - - - - - 0.902 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
80. med27 ENSDARG00000009681 1857 0.901 - - - - - - 0.901 - - mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
81. sdpra sdpra 4594 0.901 - - - - - - 0.901 - -
82. NDUFA3 ENSDARG00000041400 7939 0.898 - - - - - - 0.898 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
83. rpz2 ENSDARG00000091215 765 0.898 - - - - - - 0.898 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
84. zgc:163030 ENSDARG00000069192 2963 0.897 - - - - - - 0.897 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
85. FUCA1 FUCA1 1446 0.897 - - - - - - 0.897 - -
86. rab11ba ENSDARG00000041878 4651 0.897 - - - - - - 0.897 - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
87. NID1 NID1 6192 0.897 - - - - - - 0.897 - -
88. frem1a ENSDARG00000069473 1847 0.897 - - - - - - 0.897 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
89. fbp1a ENSDARG00000021366 1778 0.896 - - - - - - 0.896 - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
90. bdh2 ENSDARG00000052696 1157 0.896 - - - - - - 0.896 - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:ZFIN;Acc:ZDB-GENE-050417-343]
91. b3gnt3.3 ENSDARG00000093521 430 0.896 - - - - - - 0.896 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
92. kmt2cb ENSDARG00000075560 4816 0.895 - 0.895 - - - - - - - lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
93. srp72 ENSDARG00000014139 5221 0.895 - - - - - - 0.895 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
94. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.895 - - - - - - 0.895 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
95. mrps15 ENSDARG00000109289 3258 0.895 - 0.895 - - - - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
96. tfam ENSDARG00000063145 4524 0.895 - - - - - - 0.895 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
97. sp1 ENSDARG00000088347 1697 0.894 - - - - - - 0.894 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
98. lpp ENSDARG00000023578 3581 0.893 - - - - - - 0.893 - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
99. srm ENSDARG00000055760 6572 0.893 - - - - - - 0.893 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
100. atf6 ENSDARG00000012656 3873 0.893 - - - - - - 0.893 - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]

There are 1093 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA