Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1r1c

Gene Name Gene ID Reads Annotation
ppp1r1c ENSDARG00000038941 265 protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]










Genes with expression patterns similar to ppp1r1c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1r1c ENSDARG00000038941 265 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]
2. KCNS3 KCNS3 82 1.7 - 0.907 - - - - 0.793 - -
3. FRMPD1 34 1.675 0.768 0.907 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
4. si:ch73-127m5.1 ENSDARG00000060680 253 1.668 - 0.907 - - - - 0.761 - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
5. si:dkey-97l20.5 si:dkey-97l20.5 33 1.659 0.752 0.907 - - - - - - -
6. zgc:113691 ENSDARG00000038898 36 1.639 - 0.907 - - - - 0.732 - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
7. foxq1a ENSDARG00000030896 121 1.636 - 0.907 - - - - 0.729 - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
8. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.633 - 0.907 - - - - 0.726 - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
9. ankrd37 ENSDARG00000056376 131 1.62 0.713 0.907 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
10. slc17a6b ENSDARG00000041150 823 1.62 - 0.907 - - - - 0.713 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
11. fsd1 ENSDARG00000062017 207 1.617 - 0.889 - - - - 0.728 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
12. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.612 0.705 0.907 - - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
13. GJD2_1 GJD2_1 3045 1.612 0.705 0.907 - - - - - - -
14. si:dkey-78o7.3 ENSDARG00000100387 59 1.546 0.713 0.833 - - - - - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
15. CABZ01029738.1 CABZ01029738.1 327 1.542 - 0.842 - - - - 0.700 - -
16. npffr1l2 ENSDARG00000062631 127 1.539 - 0.710 - - - - 0.829 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
17. TMEM17 ENSDARG00000116334 218 1.535 - 0.790 - - - 0.745 - - - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
18. FP102801.1_1 FP102801.1_1 238 1.524 0.815 - - - - - 0.709 - -
19. eif4a1a ENSDARG00000092115 46 1.509 - 0.800 - - - - - - 0.709 eukaryotic translation initiation factor 4A1A [Source:ZFIN;Acc:ZDB-GENE-031030-2]
20. cax1 ENSDARG00000045601 366 1.504 - 0.798 - - - - 0.706 - - cation/H+ exchanger protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3044]
21. mpg ENSDARG00000069729 43 1.5 - - 0.727 - - - 0.773 - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
22. nrxn2a ENSDARG00000061454 291 1.497 - 0.792 - - - - 0.705 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
23. irx5b ENSDARG00000074070 459 1.484 - - 0.749 - - - 0.735 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
24. mb21d2a mb21d2a 421 1.466 - 0.744 - - - - 0.722 - -
25. nudt6 ENSDARG00000103523 64 1.46 - - 0.714 - - 0.746 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
26. rtn1b ENSDARG00000021143 1682 1.443 0.703 0.740 - - - - - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
27. sox19b ENSDARG00000040266 532 1.434 0.713 0.721 - - - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
28. si:ch211-247j9.1 ENSDARG00000079283 217 1.419 - 0.711 0.708 - - - - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
29. HSBP1 HSBP1 158 1 - 1.000 - - - - - - -
30. zic6 ENSDARG00000071496 402 1 - 1.000 - - - - - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
31. lrmp ENSDARG00000045574 26 1 - 1.000 - - - - - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
32. sez6l2 ENSDARG00000076052 360 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
33. rap2ip rap2ip 681 1 - 1.000 - - - - - - -
34. lhx1a ENSDARG00000014018 958 1 - 1.000 - - - - - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
35. rnf220b ENSDARG00000075183 53 1 - 1.000 - - - - - - - ring finger protein 220b [Source:ZFIN;Acc:ZDB-GENE-081104-195]
36. wu:fe36b12 wu:fe36b12 118 0.992 - 0.992 - - - - - - -
37. peli1a ENSDARG00000091592 119 0.992 - 0.992 - - - - - - - pellino E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-110310-6]
38. GAB2 ENSDARG00000105120 147 0.991 - 0.991 - - - - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
39. zgc:73340 823 0.991 - 0.991 - - - - - - - zgc:73340
40. GLRA3 ENSDARG00000011066 242 0.983 - 0.983 - - - - - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
41. syt11b ENSDARG00000056105 578 0.979 - 0.979 - - - - - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
42. scrt2 ENSDARG00000056175 4331 0.974 - 0.974 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
43. MCTP1 MCTP1 219 0.973 - 0.973 - - - - - - -
44. gad2 ENSDARG00000015537 724 0.971 - 0.971 - - - - - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
45. penka ENSDARG00000004869 161 0.954 - 0.954 - - - - - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
46. MAP1A MAP1A 847 0.951 - 0.951 - - - - - - -
47. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.945 - 0.945 - - - - - - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
48. nrsn1 ENSDARG00000111235 123 0.944 - 0.944 - - - - - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
49. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.944 - 0.944 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
50. HSPA4L ENSDARG00000053544 363 0.943 - 0.943 - - - - - - - heat shock protein 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-2412]
51. zgc:86725 2559 0.94 - 0.940 - - - - - - - zgc:86725
52. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.94 - 0.940 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
53. amph ENSDARG00000007663 599 0.94 - 0.940 - - - - - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
54. scn2b ENSDARG00000101713 796 0.94 - 0.940 - - - - - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
55. gbx1 ENSDARG00000071418 871 0.94 - 0.940 - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
56. SV2B SV2B 208 0.94 - 0.940 - - - - - - -
57. dbx2 2971 0.93 - 0.930 - - - - - - - developing brain homeobox 2
58. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 0.923 - 0.923 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
59. kcnh7 ENSDARG00000062687 172 0.92 - - - - - 0.920 - - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
60. azi1 azi1 507 0.916 - - - - - - 0.916 - -
61. slc1a2b ENSDARG00000102453 3136 0.911 - 0.911 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
62. nes ENSDARG00000088805 2710 0.909 - 0.909 - - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
63. calb1 ENSDARG00000031598 252 0.907 - 0.907 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
64. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 0.907 - 0.907 - - - - - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
65. pif1 ENSDARG00000020289 216 0.907 - 0.907 - - - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
66. zgc:153654 ENSDARG00000060322 9 0.907 - 0.907 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
67. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 0.907 - 0.907 - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
68. TUBB2A TUBB2A 142 0.907 - 0.907 - - - - - - -
69. arl11l arl11l 31 0.907 - 0.907 - - - - - - -
70. bdnf ENSDARG00000018817 193 0.907 - 0.907 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
71. si:dkey-32n7.7 ENSDARG00000063444 4 0.907 - 0.907 - - - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
72. tmigd1 ENSDARG00000007040 19 0.907 - 0.907 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
73. si:ch211-42i9.10 si:ch211-42i9.10 25 0.907 - 0.907 - - - - - - -
74. sirt7 ENSDARG00000060645 1 0.907 - 0.907 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
75. si:dkey-49o11.1 0 0.907 - 0.907 - - - - - - - si:dkey-49o11.1
76. hspbap1 ENSDARG00000033771 41 0.907 - 0.907 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
77. crispld1a ENSDARG00000077275 7 0.907 - 0.907 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
78. mfsd4a mfsd4a 179 0.907 - 0.907 - - - - - - -
79. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 0.907 - 0.907 - - - - - - - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
80. NPAS3 ENSDARG00000109820 362 0.907 - 0.907 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
81. CT025910.1 CT025910.1 143 0.907 - 0.907 - - - - - - -
82. GTPBP6 ENSDARG00000061091 29 0.907 - 0.907 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
83. BX469915.2 BX469915.2 48 0.907 - 0.907 - - - - - - -
84. uckl1a ENSDARG00000001686 21 0.907 - 0.907 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
85. MCF2L2 ENSDARG00000079742 52 0.907 - 0.907 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
86. CU571323.1 CU571323.1 7 0.907 - 0.907 - - - - - - -
87. CR388095.2 ENSDARG00000117604 76 0.907 - 0.907 - - - - - - -
88. CABZ01086828.1 CABZ01086828.1 1 0.907 - 0.907 - - - - - - -
89. otpb ENSDARG00000058379 1143 0.907 - 0.907 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
90. mir184 48 0.907 - 0.907 - - - - - - - microRNA 184
91. zeb2b ENSDARG00000078416 23 0.907 - 0.907 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
92. cdh10 cdh10 38 0.907 - 0.907 - - - - - - -
93. sdhaf1 ENSDARG00000092478 51 0.907 - 0.907 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
94. her3 ENSDARG00000076857 131 0.907 - 0.907 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
95. XRCC2 ENSDARG00000013933 15 0.907 - 0.907 - - - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
96. cant1b ENSDARG00000102977 1 0.907 - 0.907 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
97. slc17a6a ENSDARG00000001127 337 0.907 - 0.907 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
98. si:ch211-138k19.2 si:ch211-138k19.2 398 0.907 - 0.907 - - - - - - -
99. FP074874.2 ENSDARG00000105724 107 0.907 - 0.907 - - - - - - -
100. ifit2 ifit2 11 0.907 - 0.907 - - - - - - -

There are 737 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA