Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1r13bb

Gene Name Gene ID Reads Annotation
ppp1r13bb ENSDARG00000009142 1175 protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]










Genes with expression patterns similar to ppp1r13bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1r13bb ENSDARG00000009142 1175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
2. CDK5RAP2 CDK5RAP2 636 1.652 - 0.884 - - - 0.768 - - -
3. rad21a_1 ENSDARG00000006092 4482 1.628 0.864 - - - - - 0.764 - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
4. LONRF2 LONRF2 721 1.586 - 0.870 - - - - 0.716 - -
5. dscc1 ENSDARG00000019907 720 1.583 - - - - - 0.748 0.835 - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
6. tns1 tns1 5891 1.574 - - - - - 0.827 0.747 - -
7. sc:d0139 sc:d0139 233 1.566 0.774 - - - - 0.792 - - -
8. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 1.564 0.852 - - - - - 0.712 - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
9. C17H15orf57 C17H15orf57 1366 1.56 - 0.787 - - - 0.773 - - -
10. SLC22A15 ENSDARG00000055445 111 1.535 0.751 - - - - 0.784 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
11. RECQL4 ENSDARG00000077516 462 1.534 - 0.745 - - - 0.789 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
12. tom1 ENSDARG00000104581 1457 1.533 - 0.767 - - - 0.766 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
13. tfeb ENSDARG00000010794 473 1.525 - 0.760 - - - - - - 0.765 transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
14. eml2 ENSDARG00000008808 706 1.524 - - - - - 0.720 - - 0.804 echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
15. sh3bp5b ENSDARG00000103978 513 1.51 0.803 0.707 - - - - - - - SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
16. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.508 - - - - - 0.783 0.725 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
17. sass6 ENSDARG00000058346 225 1.508 0.781 0.727 - - - - - - - SAS-6 centriolar assembly protein [Source:ZFIN;Acc:ZDB-GENE-040426-2784]
18. si:ch211-92l17.1 ENSDARG00000094584 18 1.506 0.795 0.711 - - - - - - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
19. CU041398.1 CU041398.1 17 1.506 0.795 0.711 - - - - - - -
20. vangl1 ENSDARG00000004305 335 1.504 0.764 0.740 - - - - - - - VANGL planar cell polarity protein 1 [Source:ZFIN;Acc:ZDB-GENE-040621-2]
21. cops5 ENSDARG00000057624 1485 1.503 - 0.711 - - - 0.792 - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
22. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.494 - 0.726 - - - 0.768 - - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
23. il15 ENSDARG00000052361 219 1.49 - 0.725 - - - - 0.765 - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
24. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.487 0.734 - - - - 0.753 - - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
25. sp5 sp5 622 1.481 - 0.760 - - - - 0.721 - -
26. hif1an ENSDARG00000031915 2098 1.48 - 0.770 - - - - 0.710 - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
27. dnajc5ga ENSDARG00000041896 1478 1.47 - - - - - 0.765 0.705 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
28. kif16ba ENSDARG00000100225 114 1.468 0.747 0.721 - - - - - - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
29. arhgap29b ENSDARG00000017748 812 1.463 - 0.754 - - - 0.709 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
30. tmem242 ENSDARG00000037070 1081 1.462 - - - - - - 0.758 - 0.704 transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
31. pak2b ENSDARG00000018476 4331 1.461 - 0.736 - - - - 0.725 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
32. MMADHC ENSDARG00000005870 212 1.461 - 0.739 - - - - 0.722 - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
33. BX000999.4 BX000999.4 206 1.455 - 0.714 - - - 0.741 - - -
34. actr2a ENSDARG00000052438 5838 1.439 - - - 0.702 - 0.737 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
35. GSTK1_1 GSTK1_1 316 1.437 - 0.713 - - - - 0.724 - -
36. tmed5 ENSDARG00000008765 1543 1.437 - 0.726 - - - - 0.711 - - transmembrane p24 trafficking protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1302]
37. MYADML2 ENSDARG00000053953 810 1.432 - 0.720 - - - - 0.712 - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
38. mylka ENSDARG00000034801 133 1.431 - 0.707 - - - - 0.724 - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
39. dhx38 ENSDARG00000100013 1854 1.403 - 0.702 - - - - 0.701 - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
40. pcnt ENSDARG00000033012 664 0.916 0.916 - - - - - - - - pericentrin [Source:ZFIN;Acc:ZDB-GENE-030829-26]
41. ror1 ENSDARG00000015176 378 0.89 0.890 - - - - - - - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
42. smarcd2 ENSDARG00000088877 416 0.866 0.866 - - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
43. srek1ip1 ENSDARG00000043728 985 0.861 - - - - - 0.861 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
44. phf10 ENSDARG00000070084 1210 0.86 - 0.860 - - - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
45. zgc:123217 ENSDARG00000059026 292 0.86 0.860 - - - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
46. rbpms2a ENSDARG00000045930 234 0.853 - 0.853 - - - - - - - RNA binding protein, mRNA processing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040718-106]
47. ccdc104 ccdc104 248 0.853 0.853 - - - - - - - -
48. chst13 chst13 669 0.852 - 0.852 - - - - - - -
49. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.852 - - - - - 0.852 - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
50. zc3hc1 ENSDARG00000062651 1552 0.852 - - - - - 0.852 - - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
51. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 0.851 - - - - - 0.851 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
52. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.845 - - - - - - 0.845 - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
53. SCARF2 1117 0.844 - - - - - 0.844 - - - scavenger receptor class F, member 2
54. NAPA NAPA 386 0.842 0.842 - - - - - - - -
55. pmepa1 ENSDARG00000039325 652 0.842 0.842 - - - - - - - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
56. si:dkey-163m14.2 274 0.842 - 0.842 - - - - - - - si:dkey-163m14.2
57. med22 ENSDARG00000014148 1307 0.842 - 0.842 - - - - - - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
58. pvrl1b 1645 0.841 - - - - - 0.841 - - - poliovirus receptor-related 1b
59. si:ch211-213a13.1 ENSDARG00000090600 381 0.839 0.839 - - - - - - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
60. meis4.1a meis4.1a 1165 0.839 - - - - - - 0.839 - -
61. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 0.839 - - - - - 0.839 - - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
62. chmp5b ENSDARG00000103718 1608 0.838 - - - - - 0.838 - - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
63. fntb ENSDARG00000027916 736 0.838 0.838 - - - - - - - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
64. ftr64 ENSDARG00000101514 33 0.837 0.837 - - - - - - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
65. wfdc2 ENSDARG00000089187 653 0.836 - - - - - 0.836 - - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
66. CCDC135 ENSDARG00000100231 48 0.835 0.835 - - - - - - - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
67. mau2 ENSDARG00000042056 2378 0.835 - - - - - - 0.835 - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
68. rfxap ENSDARG00000076891 1299 0.834 0.834 - - - - - - - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
69. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 0.834 - - - - - 0.834 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
70. rnf175 ENSDARG00000037647 1233 0.834 - 0.834 - - - - - - - ring finger protein 175 [Source:ZFIN;Acc:ZDB-GENE-040426-1104]
71. itgbl1 ENSDARG00000040985 705 0.832 - - - - - 0.832 - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
72. kmt2e ENSDARG00000007523 1851 0.832 - - - - - 0.832 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
73. fat1 fat1 3934 0.832 - - - - - - 0.832 - -
74. zgc:101640 733 0.831 0.831 - - - - - - - - zgc:101640, transcript variant X2
75. tgm1l4 ENSDARG00000101407 800 0.83 - - - - - 0.830 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
76. xrcc1 ENSDARG00000009494 1346 0.829 - - - - - 0.829 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
77. FP103059.1 FP103059.1 750 0.829 - - - - - 0.829 - - -
78. slc35d1b ENSDARG00000027986 138 0.829 0.829 - - - - - - - - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1b [Source:ZFIN;Acc:ZDB-GENE-040426-1213]
79. RBMS1 RBMS1 258 0.828 - - - - - 0.828 - - -
80. tdrkh ENSDARG00000053474, ENSDARG00000115911 277 0.828 - 0.828 - - - - - - - tudor and KH domain containing [Source:ZFIN;Acc:ZDB-GENE-050327-81]
81. ppp1r12a ENSDARG00000010784 4333 0.825 - - - - - 0.825 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
82. nus1 ENSDARG00000027813 1417 0.824 - - - - - 0.824 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
83. gfra1b ENSDARG00000102564 821 0.824 - 0.824 - - - - - - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
84. ift172 ENSDARG00000041870 1239 0.824 0.824 - - - - - - - - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
85. CABZ01111926.1 CABZ01111926.1 249 0.823 0.823 - - - - - - - -
86. zdhhc9 ENSDARG00000060515 981 0.822 - - - - - 0.822 - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
87. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.822 - - - - - 0.822 - - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
88. st6gal2l st6gal2l 292 0.821 - - - - - 0.821 - - -
89. hace1 ENSDARG00000062280 556 0.82 - 0.820 - - - - - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
90. nr1d2b ENSDARG00000009594 1144 0.82 - - - - - 0.820 - - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
91. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 0.82 - - - - - 0.820 - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
92. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.819 0.819 - - - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
93. rbm25 rbm25 3629 0.819 - - - - - - 0.819 - -
94. ap3s2 ENSDARG00000039882 2149 0.819 - - - - - 0.819 - - - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]
95. zgc:162396 ENSDARG00000069549, ENSDARG00000114129 377 0.819 - 0.819 - - - - - - - zgc:162396 [Source:ZFIN;Acc:ZDB-GENE-030131-1190]
96. angptl4 ENSDARG00000035859 2701 0.818 - - - - - - 0.818 - - angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
97. ogg1 ENSDARG00000060002 114 0.818 0.818 - - - - - - - - 8-oxoguanine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070112-932]
98. st5 ENSDARG00000037363, ENSDARG00000112276 1797 0.818 - - - - - 0.818 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
99. mtx2 ENSDARG00000029415 2205 0.817 - 0.817 - - - - - - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
100. fam129aa ENSDARG00000042055 222 0.817 0.817 - - - - - - - - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]

There are 1300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA