Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1cbl

Gene Name Gene ID Reads Annotation
ppp1cbl ENSDARG00000102012 2301 protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]










Genes with expression patterns similar to ppp1cbl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1cbl ENSDARG00000102012 2301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
2. G3BP2 ENSDARG00000014790 9380 2.481 - 0.733 - - 0.909 0.839 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
3. csnk1g2a ENSDARG00000005458 2917 1.801 - - - - 0.929 - 0.872 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
4. atp6v0cb ENSDARG00000036577 3472 1.732 - 0.791 - - 0.941 - - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
5. usp16 ENSDARG00000060633 684 1.719 - - - - 0.955 - 0.764 - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
6. rab5c ENSDARG00000026712 4733 1.703 - - - - 0.938 - 0.765 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
7. pias4a ENSDARG00000007081 4264 1.698 - - - - 0.943 0.755 - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
8. C2H1orf123 C2H1orf123 2344 1.69 - - - - 0.926 0.764 - - -
9. spcs2 ENSDARG00000042823 10032 1.69 - - - - 0.940 - 0.750 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
10. bmi1a ENSDARG00000006010 2061 1.682 - 0.720 - - 0.962 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
11. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.67 - 0.727 - - 0.943 - - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
12. med13b ENSDARG00000003910 1143 1.669 - - - - 0.954 - 0.715 - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
13. AL935186.4 ENSDARG00000110268 1701 1.668 - - - - 0.931 - 0.737 - -
14. psmc5 ENSDARG00000015315 8458 1.664 - - - - 0.941 - 0.723 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
15. mrps33 ENSDARG00000020015 3551 1.645 - 0.704 - - 0.941 - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
16. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 1.644 - 0.810 - - - - 0.834 - - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
17. rpl7l1 ENSDARG00000042864 3256 1.631 - - - - 0.853 - 0.778 - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
18. rrbp1a ENSDARG00000013763 4723 1.604 - 0.870 - - - - 0.734 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
19. srsf9 ENSDARG00000008097 2405 1.595 - 0.777 - - - - 0.818 - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
20. ube4b ENSDARG00000037017 8012 1.595 - - - - 0.887 - 0.708 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
21. mdh1a mdh1a 11035 1.595 - - - - 0.859 0.736 - - -
22. cbfa2t2 ENSDARG00000074337 4323 1.589 - - - - 0.862 - 0.727 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
23. golga7 ENSDARG00000057676 4691 1.575 - - - - - 0.739 0.836 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
24. ctsc ENSDARG00000101334 3691 1.562 - - - - 0.788 - 0.774 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
25. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.548 - - - - 0.799 - 0.749 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
26. sept8a ENSDARG00000032606 2737 1.538 - - - - - 0.719 0.819 - - septin 8a [Source:ZFIN;Acc:ZDB-GENE-030131-309]
27. arpp19b ENSDARG00000039880 4823 1.537 - - - - - 0.800 0.737 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
28. stk40 ENSDARG00000098135 2683 1.522 - 0.713 - - - - 0.809 - - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
29. si:dkey-184d2.3 si:dkey-184d2.3 1536 1.514 - 0.779 - - - - 0.735 - -
30. prkar1aa ENSDARG00000076128 6565 1.509 - 0.790 - - - - 0.719 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
31. arpc1a ENSDARG00000008383 7353 1.498 - 0.738 - - - - 0.760 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
32. ptbp1a ENSDARG00000019362 6290 1.482 - - - - - 0.765 0.717 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
33. itgb1b.1 ENSDARG00000053232 4721 1.468 - 0.746 - - - - 0.722 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
34. zgc:55512 zgc:55512 4436 1.466 - 0.709 - - - - 0.757 - -
35. gbp ENSDARG00000040059 1939 1.451 - 0.729 - - - 0.722 - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
36. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.449 - - - - - 0.722 0.727 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
37. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.448 - 0.739 - - - - 0.709 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
38. kif11 ENSDARG00000010948 4973 1.436 - 0.706 - - - 0.730 - - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
39. pabpc1b ENSDARG00000021140 5729 1.434 - 0.702 - - - - 0.732 - - poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
40. znf827 ENSDARG00000076171 6304 1.434 - - - - 0.721 0.713 - - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
41. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.427 - - - - - 0.715 0.712 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
42. ptar1 ENSDARG00000102338 511 1.404 - - - - - 0.704 0.700 - - protein prenyltransferase alpha subunit repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-17]
43. aldh16a1 ENSDARG00000037935 617 0.966 - - - - 0.966 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
44. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.965 - - - - 0.965 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
45. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.963 - - - - 0.963 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
46. fam134c fam134c 1550 0.962 - - - - 0.962 - - - -
47. si:dkey-20j1.4 si:dkey-20j1.4 406 0.962 - - - - 0.962 - - - -
48. rca2.1 ENSDARG00000056075 3410 0.962 - - - - 0.962 - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
49. GRAMD4 GRAMD4 1967 0.961 - - - - 0.961 - - - -
50. pdpk1b ENSDARG00000018285 957 0.961 - - - - 0.961 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
51. TRAPPC10 ENSDARG00000098118 954 0.96 - - - - 0.960 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
52. eng1b eng1b 2544 0.96 - - - - 0.960 - - - -
53. spag7 ENSDARG00000011555 3224 0.959 - - - - 0.959 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
54. lin54 ENSDARG00000063194 2583 0.958 - - - - 0.958 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
55. lgi1a ENSDARG00000020493 1218 0.958 - - - - 0.958 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
56. zgc:110239 ENSDARG00000077664 7015 0.958 - - - - 0.958 - - - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
57. TUSC5_1 TUSC5_1 320 0.958 - - - - 0.958 - - - -
58. si:ch211-150o23.2 ENSDARG00000092746 788 0.958 - - - - 0.958 - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
59. hvcn1 ENSDARG00000040338 571 0.957 - - - - 0.957 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
60. st8sia6 ENSDARG00000021195 2244 0.957 - - - - 0.957 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
61. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.957 - - - - 0.957 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
62. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.957 - - - - 0.957 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
63. vbp1 ENSDARG00000030241 10619 0.957 - - - - 0.957 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
64. tab1 ENSDARG00000036613 445 0.957 - - - - 0.957 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
65. CR759921.2 CR759921.2 583 0.956 - - - - 0.956 - - - -
66. loxl2b ENSDARG00000044074 1919 0.956 - - - - 0.956 - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
67. atxn7l3 ENSDARG00000029331 531 0.956 - - - - 0.956 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
68. ercc6 ENSDARG00000075612 1175 0.956 - - - - 0.956 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
69. fut8 fut8 652 0.956 - - - - 0.956 - - - -
70. cd99 ENSDARG00000051975 3824 0.955 - - - - 0.955 - - - - CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
71. ccr10 ENSDARG00000040643 255 0.955 - - - - 0.955 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
72. pip5k1bb ENSDARG00000006508 2812 0.955 - - - - 0.955 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
73. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 0.954 - - - - 0.954 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
74. FOXL2 239 0.954 - - - - 0.954 - - - - forkhead box L2, transcript variant X1
75. myl2b ENSDARG00000053424 226 0.954 - - - - 0.954 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
76. bloc1s3 ENSDARG00000068828 502 0.954 - - - - 0.954 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
77. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.954 - - - - 0.954 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
78. fam193b ENSDARG00000102831 442 0.954 - - - - 0.954 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
79. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.954 - - - - 0.954 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
80. tbl1x ENSDARG00000060438 1386 0.954 - - - - 0.954 - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
81. pfkpb ENSDARG00000012801 223 0.954 - - - - 0.954 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
82. atp2a2a ENSDARG00000029439 940 0.954 - - - - 0.954 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
83. gorab ENSDARG00000042031 483 0.953 - - - - 0.953 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
84. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.953 - - - - 0.953 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
85. toporsb ENSDARG00000105028 1898 0.953 - - - - 0.953 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
86. nefma ENSDARG00000021351 790 0.953 - - - - 0.953 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
87. slc2a15b ENSDARG00000053269 899 0.953 - - - - 0.953 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
88. kera ENSDARG00000056938 2434 0.953 - - - - 0.953 - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
89. h1fx ENSDARG00000054058 4075 0.953 - - - - 0.953 - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
90. ccdc28b ENSDARG00000011222 528 0.953 - - - - 0.953 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
91. tmem50a ENSDARG00000015757 3244 0.952 - - - - 0.952 - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
92. psmb6 ENSDARG00000002240 8015 0.952 - - - - 0.952 - - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
93. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.952 - - - - 0.952 - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
94. BX005008.2 BX005008.2 708 0.952 - - - - 0.952 - - - -
95. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.952 - - - - 0.952 - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
96. lig4 ENSDARG00000060620 369 0.951 - - - - 0.951 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
97. cuedc2 ENSDARG00000039365 484 0.951 - - - - 0.951 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
98. hccs hccs 1758 0.951 - - - - 0.951 - - - -
99. sulf2 sulf2 1286 0.951 - - - - 0.951 - - - -
100. dvl3a ENSDARG00000015707 1132 0.951 - - - - 0.951 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]

There are 701 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA