Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ppp1cb

Gene Name Gene ID Reads Annotation
ppp1cb ENSDARG00000044153 4748 protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]










Genes with expression patterns similar to ppp1cb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1cb ENSDARG00000044153 4748 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
2. usf2 ENSDARG00000020228 2667 2.546 - 0.796 - - 0.947 0.803 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
3. pbx2 ENSDARG00000019717 6892 2.416 - - - - 0.861 0.785 - - 0.770 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
4. rsl24d1 ENSDARG00000040439 13537 2.307 - - 0.702 - - 0.770 0.835 - - ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
5. ankrd13c ENSDARG00000103831 3593 1.875 0.959 - - - - - 0.916 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
6. cdkn2aipnl ENSDARG00000053395 5107 1.84 - - - - 0.937 - 0.903 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
7. cope ENSDARG00000018562 17276 1.831 - - - - - 0.917 0.914 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
8. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 1.806 0.986 - - - - - 0.820 - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
9. mrpl27 ENSDARG00000032985 2158 1.789 - - - - 0.929 - 0.860 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
10. lmnb2 ENSDARG00000101624 11304 1.771 - - - - 0.899 - 0.872 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
11. erh ENSDARG00000032866 20633 1.769 - - - - - 0.861 0.908 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
12. zgc:161969 ENSDARG00000041359 898 1.757 - - - - 0.932 - 0.825 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
13. PRODH_1 PRODH_1 3400 1.754 - - - - 0.941 - 0.813 - -
14. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.748 - - - - 0.898 - 0.850 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
15. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.744 - - - - 0.921 - 0.823 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
16. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1.74 - - - - 0.941 - 0.799 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
17. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.737 - - - - 0.841 - 0.896 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
18. calm2b 3890 1.731 - - - - - - 0.897 - 0.834 calmodulin 2b, (phosphorylase kinase, delta)
19. chst11 ENSDARG00000034375 2701 1.729 - - - - 0.897 - 0.832 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
20. sdc2 ENSDARG00000002731 6607 1.727 - - - - 0.875 - 0.852 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
21. tcf12 ENSDARG00000004714 7606 1.724 - - - - - - 0.900 - 0.824 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
22. ak2 ENSDARG00000005926 7598 1.719 - - - - 0.856 - 0.863 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
23. mrpl12 ENSDARG00000038768 5539 1.715 - - - - 0.881 - 0.834 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
24. fam213aa 1986 1.709 - - - - - 0.807 0.902 - - family with sequence similarity 213, member Aa
25. unc5b ENSDARG00000033327 3432 1.705 - - - - 0.936 - 0.769 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
26. MAPRE2 ENSDARG00000099943 3041 1.702 - - - - - 0.874 - - 0.828 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
27. btbd10b ENSDARG00000020252 7251 1.696 - - - - 0.935 0.761 - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
28. rybpa ENSDARG00000037773 904 1.692 - - - - 0.948 - - 0.744 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
29. ppp3r1a ENSDARG00000092659 9729 1.683 - - - - - 0.731 0.952 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
30. smg7 ENSDARG00000060767 2759 1.679 - - - - 0.937 0.742 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
31. hgs ENSDARG00000020960 3574 1.666 - 0.733 - - 0.933 - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
32. arpc4 ENSDARG00000054063 6150 1.663 - - - - 0.897 0.766 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
33. TEAD3 TEAD3 8614 1.661 - - - - - 0.864 0.797 - -
34. ctnnd2b ENSDARG00000003779 964 1.661 - - - - 0.950 - - 0.711 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
35. rab11al ENSDARG00000014340 2116 1.66 - - - - - 0.809 0.851 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
36. ACTN4_1 ACTN4_1 8550 1.66 - - - - 0.827 - 0.833 - -
37. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.656 - 0.778 - - 0.878 - - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
38. poc1bl ENSDARG00000012745 2451 1.65 0.715 - - - 0.935 - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
39. celsr1a ENSDARG00000069185 1894 1.647 - - - - - - 0.853 - 0.794 cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
40. psmd7 ENSDARG00000102417 4732 1.645 - - - - - 0.793 0.852 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
41. prkar1aa ENSDARG00000076128 6565 1.641 0.909 - - - - 0.732 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
42. aldh6a1 ENSDARG00000053485 7744 1.636 - 0.782 - - 0.854 - - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
43. rab11ba ENSDARG00000041878 4651 1.626 - - - - - - 0.856 - 0.770 RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
44. GABARAP GABARAP 8341 1.626 - 0.801 - - 0.825 - - - -
45. src ENSDARG00000008107 3643 1.616 - - - - 0.831 0.785 - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
46. tpd52l2b ENSDARG00000013655 9460 1.615 - - - - - 0.709 0.906 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
47. lpp ENSDARG00000023578 3581 1.614 - 0.754 - - - - 0.860 - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
48. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.612 - 0.722 - - - - 0.890 - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
49. inppl1a ENSDARG00000104222 6256 1.611 - 0.780 - - - - 0.831 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
50. arpc4l ENSDARG00000058225 10107 1.61 - 0.702 - - - - 0.908 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
51. cast ENSDARG00000058693 15565 1.609 - - - - - 0.834 0.775 - - calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
52. idh3g ENSDARG00000023648 4877 1.608 - - - - - 0.766 0.842 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
53. FUCA1 FUCA1 1446 1.607 - - - - - 0.754 0.853 - -
54. ciao1 ENSDARG00000059212 1222 1.604 - 0.752 - - - - 0.852 - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
55. zgc:100918 ENSDARG00000087243 5451 1.604 - 0.734 - - - 0.870 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
56. ap2m1a ENSDARG00000002790 9781 1.6 - 0.808 - - - - 0.792 - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
57. srsf3b ENSDARG00000059360 14888 1.596 - - - - - 0.716 0.880 - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
58. golga7 ENSDARG00000057676 4691 1.595 - 0.713 - - 0.882 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
59. kansl3 ENSDARG00000029556 2487 1.59 - - - - - - 0.867 0.723 - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
60. col14a1a ENSDARG00000005762 4778 1.589 - - - - 0.733 - 0.856 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
61. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.583 0.704 - - - - - 0.879 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
62. atf4b1 atf4b1 17316 1.58 0.856 - - - - 0.724 - - -
63. atl3 ENSDARG00000004270 2806 1.577 0.716 - - - - - 0.861 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
64. chd4b ENSDARG00000025789 14299 1.573 - 0.737 - - - - 0.836 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
65. phf21ab ENSDARG00000021378 1706 1.569 - 0.732 - - - - 0.837 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
66. dldh ENSDARG00000008785 15202 1.569 0.855 - - - - - 0.714 - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
67. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.568 - - - - - 0.712 0.856 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
68. shroom4 ENSDARG00000079900 1852 1.566 - - - - - - 0.845 0.721 - shroom family member 4 [Source:ZFIN;Acc:ZDB-GENE-041111-246]
69. ep300b ENSDARG00000061108 5173 1.566 0.728 - - - 0.838 - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
70. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.565 - 0.814 - - 0.751 - - - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
71. NBEAL1 ENSDARG00000099547 1112 1.564 - - - - - 0.713 0.851 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
72. CABZ01079427.1 CABZ01079427.1 1682 1.564 0.725 - - - - - 0.839 - -
73. wasf2 ENSDARG00000024209 5338 1.561 - 0.851 - - - 0.710 - - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
74. dnaja2 ENSDARG00000104066 11946 1.558 - 0.766 - - - 0.792 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
75. EML4_1 EML4_1 8736 1.556 - - - - - 0.714 0.842 - -
76. znf598 ENSDARG00000014945 1838 1.554 - 0.758 - - - - - - 0.796 zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
77. wu:fc34e06 1793 1.554 - - - - - 0.713 0.841 - - wu:fc34e06, transcript variant X10
78. wtap ENSDARG00000042642 1779 1.547 - - - - - 0.726 0.821 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
79. HIPK1_1 HIPK1_1 8096 1.546 - - - - 0.767 0.779 - - -
80. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.54 - 0.704 - - - - 0.836 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
81. tmed4 ENSDARG00000024954 3476 1.535 - - - - - 0.704 0.831 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
82. PTS ENSDARG00000045269 2185 1.535 - - - - - 0.712 0.823 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
83. tmem203 ENSDARG00000104996 1182 1.534 - - - - - 0.702 0.832 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
84. eif2s3 ENSDARG00000008292 17051 1.531 - 0.727 - - 0.804 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
85. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.53 - - - - - 0.805 - - 0.725 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
86. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.528 - 0.740 - - - 0.788 - - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
87. ddi2 ENSDARG00000006477 4190 1.528 - 0.728 - - - 0.800 - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
88. dusp1 ENSDARG00000100515 2338 1.523 0.721 - - - - - - - 0.802 dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
89. si:dkey-87o1.2 ENSDARG00000095796 6602 1.522 - - - - - 0.712 0.810 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
90. ndufb7 ENSDARG00000033789 5898 1.521 - 0.734 - - - - 0.787 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
91. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 1.515 0.706 - - - - - 0.809 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
92. zgc:162356 zgc:162356 5115 1.514 - - - - 0.771 - 0.743 - -
93. sri ENSDARG00000058593 13152 1.508 - - - - 0.774 0.734 - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
94. pcdh10a ENSDARG00000099729 2214 1.506 - 0.709 - - 0.797 - - - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
95. snrpf ENSDARG00000105037 10241 1.502 - 0.743 - - 0.759 - - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
96. slc11a2 ENSDARG00000024295 3197 1.499 - 0.758 - - - - 0.741 - - solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-021115-1]
97. psmd8 ENSDARG00000020454 6645 1.493 - 0.716 - - - 0.777 - - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
98. bc2 5213 1.483 - 0.779 - - - 0.704 - - - putative breast adenocarcinoma marker
99. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.483 0.732 - - - - 0.751 - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
100. G3BP2_1 G3BP2_1 2390 1.462 - 0.715 - - - 0.747 - - -

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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