Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppp1caa

Gene Name Gene ID Reads Annotation
ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]










Genes with expression patterns similar to ppp1caa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
2. khsrp ENSDARG00000026489 15738 3.298 - 0.986 - - - 0.709 0.788 - 0.815 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
3. snrnp70 ENSDARG00000077126 5921 2.588 - - - 0.994 - - - 0.753 0.841 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
4. sumo3a ENSDARG00000028119 13447 2.575 - 0.981 - - - - 0.769 - 0.825 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
5. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.521 - - - 0.997 0.760 - 0.764 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
6. eif3i ENSDARG00000017445 21149 2.48 - - - 0.976 - - 0.763 - 0.741 eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
7. MKI67 ENSDARG00000091150 11038 2.435 - - - - - 0.712 0.819 - 0.904 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
8. hnrnpub ENSDARG00000004735 16496 2.431 - 0.905 - - 0.809 - - - 0.717 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
9. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.42 0.803 - - - - - 0.741 - 0.876 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
10. srsf6a ENSDARG00000013729 8576 2.403 - - - - - 0.727 0.875 - 0.801 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
11. MATR3 MATR3 3962 2.372 - - - - - 0.800 0.783 - 0.789
12. arid2 ENSDARG00000007413 4413 2.343 - - - - 0.783 0.804 0.756 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
13. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 2.295 0.765 - - - - 0.794 0.736 - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
14. vdac1 ENSDARG00000045132 8051 2.252 - - - - 0.746 - 0.702 - 0.804 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
15. cdca8 ENSDARG00000043137 7541 2.243 0.759 - - - 0.706 - 0.778 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
16. SERBP1 SERBP1 9276 2.219 - - - - - 0.718 0.790 0.711 -
17. pomp ENSDARG00000032296 4439 2.21 - - - - - 0.719 0.719 - 0.772 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
18. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 2.201 - - 0.746 - - - 0.717 - 0.738 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
19. wdfy1 ENSDARG00000005425 3628 2.169 - - 0.716 - 0.731 0.722 - - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
20. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.817 - 0.999 - - - - - - 0.818 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
21. arnt2 ENSDARG00000103697 5731 1.797 - - - 0.997 - - - - 0.800 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
22. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.793 - - - 0.996 - - 0.797 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
23. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.79 - 0.983 - - - 0.807 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
24. ssbp3b ENSDARG00000030155 7163 1.77 - - - 0.995 - - - - 0.775 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
25. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.765 - 0.994 - - - - 0.771 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
26. nutf2l ENSDARG00000014499 3927 1.757 - 0.992 - - - - 0.765 - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
27. gna11b ENSDARG00000053326 5118 1.743 - - - 0.998 - - 0.745 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
28. pip5k2 pip5k2 5743 1.732 - 0.994 - - - - 0.738 - -
29. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.73 - - - 0.993 - - 0.737 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
30. SMAD4 SMAD4 3233 1.729 0.730 0.999 - - - - - - -
31. mcrs1 ENSDARG00000020840 3232 1.717 - 0.991 - - - - - - 0.726 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
32. patl1 ENSDARG00000017423 2744 1.71 - - - 0.997 0.713 - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
33. aurkb ENSDARG00000037640 4874 1.709 - 0.999 - - - - 0.710 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
34. rabggtb ENSDARG00000068587 1935 1.708 - 0.998 - - - 0.710 - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
35. CR383676.3 CR383676.3 2650 1.705 - - - 0.998 - - 0.707 - -
36. ammecr1 ENSDARG00000012892 14475 1.705 - - - 0.988 - 0.717 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
37. casc5 1487 1.704 - 0.999 0.705 - - - - - - cancer susceptibility candidate 5, transcript variant X3
38. sox3 ENSDARG00000053569 12016 1.701 - - - 0.975 - - - - 0.726 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
39. med31 ENSDARG00000008020 4161 1.698 - - - 0.998 0.700 - - - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
40. puf60b ENSDARG00000001241 13827 1.691 - - - - - 0.857 - - 0.834 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
41. sarnp ENSDARG00000059357 4768 1.688 - - - - - 0.873 - - 0.815 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
42. pim1 ENSDARG00000100020 7035 1.677 - - - 0.929 - - 0.748 - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
43. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.676 - 0.960 - - - - - 0.716 - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
44. atf4b2 atf4b2 4734 1.671 - - - - 0.761 - 0.910 - -
45. srsf6b ENSDARG00000016783 9926 1.67 - - - - - - 0.839 - 0.831 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
46. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.662 - - - - - - 0.820 - 0.842 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
47. slbp ENSDARG00000100558 3405 1.658 - - - - 0.841 - - - 0.817 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
48. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.649 - 0.935 - - - 0.714 - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
49. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.638 - - - - - - 0.839 - 0.799 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
50. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.632 - - - - - 0.806 0.826 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
51. sf3a1 ENSDARG00000041887 6702 1.619 - 0.908 - - - 0.711 - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
52. plcg1 ENSDARG00000038442 5324 1.612 - - - - - 0.779 - - 0.833 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
53. KDM6B KDM6B 10265 1.61 - - - - - - 0.781 - 0.829
54. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.606 - - - 0.894 - - - - 0.712 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
55. syncripl ENSDARG00000026723 3889 1.601 - - - - 0.771 - - - 0.830 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
56. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.595 - - - - 0.789 - - - 0.806 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
57. b4galt6 ENSDARG00000010301 2005 1.586 - - - - - 0.760 0.826 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
58. dut ENSDARG00000106529 3120 1.583 - - - - 0.762 - - - 0.821 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
59. tax1bp1b ENSDARG00000056856 4526 1.582 - 0.797 - - - 0.785 - - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
60. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.582 - - 0.773 - - - 0.809 - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
61. hnrpl 6412 1.582 - - 0.727 - - - - - 0.855 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
62. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.579 - - - - - - - 0.786 0.793 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
63. bcor ENSDARG00000017798 1719 1.579 - - - - - 0.816 - - 0.763 BCL6 corepressor [Source:ZFIN;Acc:ZDB-GENE-040408-1]
64. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.573 - - - - - - 0.783 0.790 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
65. lypla2 ENSDARG00000053656 8971 1.569 - - - - - - 0.763 - 0.806 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
66. ube4b ENSDARG00000037017 8012 1.569 - - - - - - 0.722 - 0.847 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
67. taf10 ENSDARG00000068641 3333 1.569 - - - - - 0.814 0.755 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
68. cul4b ENSDARG00000060510 6053 1.567 - - - - 0.745 0.822 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
69. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.565 - - - - - - 0.831 - 0.734 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
70. fscn1a ENSDARG00000059680 3999 1.563 - - - - - - 0.712 - 0.851 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
71. zswim5 ENSDARG00000055900 4243 1.56 - - - - 0.741 - - - 0.819 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
72. oxsr1a ENSDARG00000034189 4314 1.559 0.776 - - - - - - - 0.783 oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
73. llgl1 ENSDARG00000009693 4205 1.559 - - - - - - 0.763 - 0.796 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
74. u2af2b ENSDARG00000011740 6946 1.559 - - - - - - 0.734 - 0.825 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
75. rbbp6 ENSDARG00000037919 4813 1.558 - - - - - 0.753 - - 0.805 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
76. u2af1 ENSDARG00000015325 3217 1.558 - - - - 0.756 - 0.802 - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
77. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.558 - - - - - - 0.742 - 0.816 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
78. HNRNPAB HNRNPAB 22267 1.555 - - - - - - 0.711 - 0.844
79. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.546 - - - - 0.790 - - - 0.756 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
80. anp32b ENSDARG00000023330 25013 1.539 - - - - - 0.751 0.788 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
81. drg1 ENSDARG00000039345 7545 1.538 - - - - - - 0.708 - 0.830 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
82. CR936437.1 CR936437.1 6465 1.536 - - - - 0.712 - - - 0.824
83. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.527 - - - - - 0.773 0.754 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
84. ppp2r1a ppp2r1a 11291 1.524 - - - - - - 0.773 - 0.751
85. her15.2 her15.2 1701 1.52 - - - - 0.760 - - - 0.760
86. dido1 ENSDARG00000057940 3819 1.515 - - - - - - 0.709 - 0.806 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
87. abi2b ENSDARG00000014875 2259 1.51 - - - - - - 0.728 - 0.782 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
88. si:rp71-61h23.4 1921 1.509 0.756 - - - - - 0.753 - - si:rp71-61h23.4
89. bri3bp ENSDARG00000010108 6295 1.507 0.704 - - - - - - - 0.803 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
90. cks1b ENSDARG00000007971 2739 1.506 0.761 - - - - 0.745 - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
91. JHDM1D JHDM1D 2277 1.506 - - - - 0.717 - - - 0.789
92. apex1 ENSDARG00000045843 6345 1.502 - - - - - - 0.706 0.796 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
93. eif4h ENSDARG00000042252 6742 1.498 - - - - - 0.701 0.797 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
94. gse1 ENSDARG00000062020 2337 1.498 - - - - - 0.756 - - 0.742 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
95. poglut1 ENSDARG00000053463 738 1.498 - - 0.724 - - - 0.774 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
96. TNRC6A ENSDARG00000079688 14433 1.496 - - - - - 0.703 0.793 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
97. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.495 - - - - 0.790 - 0.705 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
98. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.487 0.749 - - - - - 0.738 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
99. sumo3b ENSDARG00000035993 3414 1.486 - - - - - - 0.762 - 0.724 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
100. leo1 ENSDARG00000055357 1644 1.485 - - - - 0.759 0.726 - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]

There are 1010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA