Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ppm1f

Gene Name Gene ID Reads Annotation
ppm1f ENSDARG00000005786, ENSDARG00000109839 25 protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]










Genes with expression patterns similar to ppm1f

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
2. CABZ01080142.1 CABZ01080142.1 52 2.496 0.886 0.763 - - - - 0.847 - -
3. CU695076.1 CU695076.1 7 2 1.000 1.000 - - - - - - -
4. BX682234.3 BX682234.3 7 2 - 1.000 - - - - 1.000 - -
5. cthrc1b ENSDARG00000001971 44 2 - 1.000 - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
6. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 2 1.000 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
7. SNORA81_1 SNORA81_1 8 2 1.000 - - - - - 1.000 - -
8. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 2 1.000 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
9. arl8 ENSDARG00000094709 6 2 1.000 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
10. PARM1 ENSDARG00000114063 58 1.998 1.000 - - - - 0.998 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
11. sgms2 57 1.997 - 1.000 - - - 0.997 - - - sphingomyelin synthase 2, transcript variant X1
12. mir10b-2 116 1.994 - - - - - 0.994 1.000 - - microRNA 10b-2
13. NPFFR1 ENSDARG00000111997 29 1.991 - - - - - 0.991 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
14. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.988 1.000 - - - - 0.988 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
15. SSBP2 ENSDARG00000099727 22 1.985 - 1.000 - - - 0.985 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
16. atat1 ENSDARG00000004472 700 1.985 - 1.000 - - - 0.985 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
17. XKR7 ENSDARG00000026333 175 1.984 - 1.000 - - - 0.984 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
18. KCNIP4 ENSDARG00000088100 86 1.975 - 1.000 - - - 0.975 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
19. FP565458.1 FP565458.1 61 1.975 1.000 0.975 - - - - - - -
20. zgc:174697 zgc:174697 128 1.968 - 1.000 - - - 0.968 - - -
21. PPFIA3 ENSDARG00000077053 310 1.967 - 1.000 - - - 0.967 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
22. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 1.925 - - 0.925 - - 1.000 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
23. CABZ01038313.1 CABZ01038313.1 79 1.906 - 1.000 - - - 0.906 - - -
24. PFKFB1 ENSDARG00000037140 5 1.901 - - - - 0.901 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
25. MSRA ENSDARG00000029587 30 1.901 - 1.000 - - 0.901 - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
26. bsk146 ENSDARG00000099069 274 1.894 - 1.000 - - - 0.894 - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
27. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.881 - 1.000 - - - 0.881 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
28. CABZ01065506.1 CABZ01065506.1 204 1.875 - 1.000 - - - 0.875 - - -
29. RGS9BP ENSDARG00000086756 65 1.862 - 1.000 - - - 0.862 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
30. si:ch211-113a14.26_3 6 1.86 - 1.000 - - 0.860 - - - - si:ch211-113a14.26
31. si:dkey-58f10.9 si:dkey-58f10.9 86 1.859 0.942 0.917 - - - - - - -
32. syt9a ENSDARG00000003994 298 1.859 - 1.000 - - - 0.859 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
33. CR847906.1 ENSDARG00000099493 88 1.857 - 1.000 - - - 0.857 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
34. SERINC3 SERINC3 21 1.856 0.856 1.000 - - - - - - -
35. eif2b5 ENSDARG00000074995 8 1.853 - 1.000 - - 0.853 - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
36. si:dkey-21o19.6 si:dkey-21o19.6 18 1.853 - 1.000 - - - 0.853 - - -
37. rtn4rl2a ENSDARG00000052012 5 1.835 - 1.000 - 0.835 - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
38. scin ENSDARG00000010728, ENSDARG00000111092 437 1.832 - 1.000 - - - 0.832 - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
39. CABZ01080434.1 ENSDARG00000102438 4 1.825 - - - 0.825 - - 1.000 - -
40. si:ch211-170d12.2 si:ch211-170d12.2 1 1.825 1.000 - - 0.825 - - - - -
41. CCDC18 ENSDARG00000078822 5 1.825 1.000 - - 0.825 - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
42. BX088525.2 ENSDARG00000117222 11 1.822 1.000 0.822 - - - - - - -
43. CABZ01080492.1 CABZ01080492.1 495 1.821 1.000 - - - 0.821 - - - -
44. hecw1 hecw1 241 1.814 - 0.888 - - - 0.926 - - -
45. CABZ01085054.1 CABZ01085054.1 20 1.813 1.000 - - - 0.813 - - - -
46. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.807 - 0.822 - - - 0.985 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
47. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.806 - 0.900 - - - 0.906 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
48. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1.802 1.000 0.802 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
49. arsa ENSDARG00000042270 74 1.798 - 1.000 - - - - 0.798 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
50. FAM163A ENSDARG00000093021 86 1.793 - 0.950 - - - 0.843 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
51. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 1.791 - - 0.915 - - - 0.876 - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
52. SNORA57 SNORA57 148 1.79 - - - - - 0.992 0.798 - -
53. mapk8ip2 ENSDARG00000063157 467 1.779 - 0.861 - - - 0.918 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
54. purg ENSDARG00000099187, ENSDARG00000114450 33 1.76 - - - - 0.760 - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
55. BX511189.1 BX511189.1 34 1.746 0.746 1.000 - - - - - - -
56. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.733 - 1.000 - - - 0.733 - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
57. nrcam nrcam 397 1.732 - 1.000 - - - 0.732 - - -
58. cpeb1a ENSDARG00000045932 81 1.731 0.915 - - - - 0.816 - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
59. si:ch73-343l4.8 ENSDARG00000077975 4 1.715 - - - 0.825 0.890 - - - - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
60. ecscr ENSDARG00000087457 319 1.713 0.886 - - - - - 0.827 - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
61. cx45.6 cx45.6 26 1.713 1.000 0.713 - - - - - - -
62. ssh1b ENSDARG00000010031 4 1.713 1.000 - - 0.713 - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
63. ovca2 ENSDARG00000103748 38 1.709 1.000 0.709 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
64. pag1 ENSDARG00000055875 21 1.703 - 1.000 - 0.703 - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
65. cacnb4b ENSDARG00000062174 159 1.699 - 0.900 - - - 0.799 - - - calcium channel, voltage-dependent, beta 4b subunit [Source:ZFIN;Acc:ZDB-GENE-060421-7907]
66. TRIM14_8 TRIM14_8 5 1.696 - - - 0.825 0.871 - - - -
67. si:ch211-240g9.1 36 1.688 - 0.704 - - - 0.984 - - - si:ch211-240g9.1
68. SLC9B1 SLC9B1 137 1.672 - 0.704 - - - 0.968 - - -
69. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.656 - 0.710 - - - 0.946 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
70. CABZ01002768.1 ENSDARG00000098901 2 1.652 - - 0.925 - - - - - 0.727
71. thsd7ba ENSDARG00000095022 231 1.646 - 0.770 - - - 0.876 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
72. JTB ENSDARG00000070150 135 1.645 - 0.851 - - - - 0.794 - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
73. CU929230.1 ENSDARG00000030665 48 1.644 - 0.883 - - - - - - 0.761 transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
74. fbxw9 ENSDARG00000058020 28 1.638 - - - 0.802 - - 0.836 - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
75. prdm11 ENSDARG00000074468 2 1.628 - - - - 0.901 - - - 0.727 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
76. arhgef11 ENSDARG00000052482 24 1.626 - 0.802 - 0.824 - - - - - Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
77. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.622 - 0.921 - - - 0.701 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
78. B4GALNT1 B4GALNT1 352 1.585 - 0.753 - - - 0.832 - - -
79. nr5a1b ENSDARG00000023362 54 1.579 0.780 - - - - - 0.799 - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
80. TTC9 ENSDARG00000074363 196 1.577 - 0.761 - - - 0.816 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
81. scn1lab ENSDARG00000062744 155 1.55 - 0.731 - - - 0.819 - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
82. CR631122.1 ENSDARG00000044534 8 1.544 - - - - 0.817 - - - 0.727 protein RD3-like [Source:NCBI gene;Acc:100149591]
83. sult1st5 ENSDARG00000003475, ENSDARG00000111502 34 1.541 - - - - 0.762 - 0.779 - - sulfotransferase family 1, cytosolic sulfotransferase 5 [Source:ZFIN;Acc:ZDB-GENE-050809-2]
84. sumf2 ENSDARG00000069497 51 1.533 - 0.754 - - - - 0.779 - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
85. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.531 - 0.754 - - - 0.777 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
86. elnb ENSDARG00000069017 744 1.518 - - - - - 0.767 0.751 - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
87. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1.514 - - - - 0.787 - - - 0.727
88. atp1b4 ENSDARG00000053262 1337 1.493 - 0.764 - - - 0.729 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
89. zgc:174224_2 ENSDARG00000093875 22 1.482 - 0.731 - - - - 0.751 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
90. mgat4a ENSDARG00000063330 3 1.473 0.746 - - - - - - - 0.727 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
91. chico ENSDARG00000019588 77 1.459 0.746 0.713 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
92. atp2b3b ENSDARG00000023445 1424 1.448 - 0.716 - - - 0.732 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
93. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
94. fermt3a fermt3a 56 1 1.000 - - - - - - - -
95. PARP6 PARP6 119 1 - 1.000 - - - - - - -
96. tyro3 ENSDARG00000005356 4 1 - 1.000 - - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
97. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
98. si:dkey-157g16.6 ENSDARG00000057062 12 1 - 1.000 - - - - - - - si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
99. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
100. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]

There are 2095 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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