Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppm1ba

Gene Name Gene ID Reads Annotation
ppm1ba ENSDARG00000001888 319 protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]










Genes with expression patterns similar to ppm1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppm1ba ENSDARG00000001888 319 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
2. spop ENSDARG00000100519 177 1.786 - 0.873 - 0.913 - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
3. CRTC1 47 1.77 - 0.842 - 0.928 - - - - - CREB regulated transcription coactivator 1
4. erbb2ip 403 1.725 - - - 0.906 - - - 0.819 - erbb2 interacting protein, transcript variant X3
5. POMK ENSDARG00000003208, ENSDARG00000112152 529 1.705 - - - 0.872 - - - 0.833 - protein-O-mannose kinase [Source:ZFIN;Acc:ZDB-GENE-041114-119]
6. stard3 ENSDARG00000017809 727 1.671 - - - 0.804 - - - 0.867 - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
7. si:ch211-81a5.8 ENSDARG00000070972 59 1.648 - 0.732 - 0.916 - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
8. pparaa ENSDARG00000031777 216 1.635 - 0.723 - 0.912 - - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
9. vegfaa ENSDARG00000103542 436 1.633 - 0.794 - - - - 0.839 - - vascular endothelial growth factor Aa [Source:ZFIN;Acc:ZDB-GENE-990415-273]
10. foxq1b ENSDARG00000055395 549 1.628 - 0.809 - - - - - 0.819 - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
11. C12H10orf71 C12H10orf71 595 1.613 - - - 0.880 - - 0.733 - -
12. oprd1b ENSDARG00000037159 21 1.611 - 0.742 - - - - - 0.869 - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
13. tubb1 ENSDARG00000053066 364 1.61 - 0.757 - - - - - 0.853 - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
14. si:ch211-71k14.1 ENSDARG00000087061 48 1.594 - 0.726 - - - - - 0.868 - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
15. slc25a44a ENSDARG00000045927 1067 1.592 - - - 0.829 - 0.763 - - - solute carrier family 25, member 44 a [Source:ZFIN;Acc:ZDB-GENE-041114-38]
16. CR628395.1 ENSDARG00000116298 75 1.588 - - - - - - 0.746 0.842 -
17. nrg1 ENSDARG00000104314 1081 1.588 - - - 0.876 - - - 0.712 - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
18. CU019646.1 ENSDARG00000117632 223 1.586 - - - 0.854 - 0.732 - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
19. lmx1ba ENSDARG00000104815 376 1.584 - - - 0.795 - - - 0.789 - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
20. NAV2 NAV2 538 1.584 - - - 0.815 - - 0.769 - -
21. DUSP23 DUSP23 121 1.583 - 0.712 - - - - - 0.871 -
22. BX927314.1 BX927314.1 47 1.574 - - - - - - 0.705 0.869 -
23. NETO2 121 1.566 - - - - - - 0.706 0.860 - neuropilin and tolloid like 2, transcript variant X2
24. C20H6orf211 C20H6orf211 529 1.558 0.722 - - 0.836 - - - - -
25. KCNAB2 KCNAB2 129 1.55 - - - - - - 0.705 0.845 -
26. homer1b_1 ENSDARG00000101759 259 1.536 - - - - - - 0.702 0.834 - homer scaffold protein 1b [Source:ZFIN;Acc:ZDB-GENE-040801-44]
27. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.525 - - - - - - 0.706 0.819 - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
28. mterfd1 mterfd1 287 1.513 0.741 0.772 - - - - - - -
29. egln3 ENSDARG00000032553 280 1.508 - 0.706 - - - - - 0.802 - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
30. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 1.504 - 0.742 - - - - 0.762 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
31. ttc13 ENSDARG00000063242 1360 1.499 - - - 0.739 - - - 0.760 - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
32. im:7136729 im:7136729 1625 1.493 - - - 0.778 - - - 0.715 -
33. ctr9 ENSDARG00000009170 1265 1.478 - - - - - - 0.708 0.770 - CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
34. TMEM74B ENSDARG00000078868 45 1.438 - 0.733 - - - - 0.705 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
35. hmx2 ENSDARG00000070954, ENSDARG00000115364 396 1.434 - - 0.712 - - - 0.722 - - H6 family homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-080506-2]
36. eef2k ENSDARG00000035835 2906 1.407 - 0.702 - - - - 0.705 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
37. si:dkey-65b12.6 ENSDARG00000076830 2489 0.953 - 0.953 - - - - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
38. gpr146 ENSDARG00000059610 810 0.936 - - - 0.936 - - - - - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
39. si:dkey-267k7.4 si:dkey-267k7.4 111 0.936 - 0.936 - - - - - - -
40. memo1 ENSDARG00000010823 1681 0.934 - - - 0.934 - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
41. PGBD1 PGBD1 61 0.933 - 0.933 - - - - - - -
42. zgc:114046 ENSDARG00000091728 68 0.933 - - - 0.933 - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
43. tmie ENSDARG00000069423 305 0.931 - - - 0.931 - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
44. dars2 ENSDARG00000060861 137 0.929 - - - 0.929 - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
45. wacb ENSDARG00000099015 146 0.929 - - - 0.929 - - - - - WW domain containing adaptor with coiled-coil b [Source:ZFIN;Acc:ZDB-GENE-041010-46]
46. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.928 - - - 0.928 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
47. CABZ01054965.1 ENSDARG00000090844 74 0.928 - - - 0.928 - - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
48. ENSDARG00000092971 ENSDARG00000092971 563 0.928 - - - 0.928 - - - - -
49. rnf181 ENSDARG00000023958 270 0.927 - - - 0.927 - - - - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
50. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.927 - - - 0.927 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
51. CD53 CD53 108 0.927 - - - 0.927 - - - - -
52. adam10b ENSDARG00000015502 26 0.927 - - - 0.927 - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
53. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.926 - - - 0.926 - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
54. si:dkey-16b10.3 si:dkey-16b10.3 21 0.925 - - - 0.925 - - - - -
55. CABZ01021433.1 ENSDARG00000105696 74 0.925 - - - 0.925 - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
56. ift57 ENSDARG00000021022 288 0.925 - - - 0.925 - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
57. aatka ENSDARG00000078222 218 0.925 - - - 0.925 - - - - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
58. zgc:92161 ENSDARG00000101749 27 0.924 - - - 0.924 - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
59. map3k8 ENSDARG00000061710 76 0.924 - - - 0.924 - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
60. HELZ2_1 ENSDARG00000012600 53 0.924 - - - 0.924 - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
61. acap1 ENSDARG00000056346, ENSDARG00000109603 274 0.923 - - - 0.923 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
62. cyp2v1 ENSDARG00000018485 694 0.922 - - - 0.922 - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
63. gfra2a ENSDARG00000042723 592 0.922 - - - 0.922 - - - - - GDNF family receptor alpha 2a [Source:ZFIN;Acc:ZDB-GENE-040630-1]
64. zgc:154075 ENSDARG00000067630 284 0.922 - - - 0.922 - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
65. si:ch211-133l11.10 ENSDARG00000005626 381 0.921 - - - 0.921 - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
66. cyb561d2 ENSDARG00000044114 249 0.921 - 0.921 - - - - - - - cytochrome b561 family, member D2 [Source:ZFIN;Acc:ZDB-GENE-041010-205]
67. si:ch73-239k17.1 si:ch73-239k17.1 44 0.919 - - - 0.919 - - - - -
68. cyp2aa11 ENSDARG00000103456 42 0.918 - - - 0.918 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 11 [Source:ZFIN;Acc:ZDB-GENE-110114-3]
69. wdfy2 ENSDARG00000040453 406 0.918 - - - 0.918 - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
70. gpr186 ENSDARG00000094860 53 0.918 - - - 0.918 - - - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
71. TTF1_1 TTF1_1 299 0.918 - - - 0.918 - - - - -
72. rad17 ENSDARG00000018918 332 0.917 - - - 0.917 - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
73. ENSDARG00000089986 ENSDARG00000089986 308 0.916 - 0.916 - - - - - - -
74. FP103003.1 FP103003.1 167 0.916 - - - 0.916 - - - - -
75. nr5a2 ENSDARG00000100940 1488 0.916 - - - 0.916 - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
76. ptprz1b ENSDARG00000020871 435 0.915 - - - 0.915 - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
77. CABZ01081897.1 ENSDARG00000110500 253 0.914 - - - 0.914 - - - - -
78. ccm2l ENSDARG00000063089 100 0.913 - - - 0.913 - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
79. ugt2a4 ENSDARG00000051940 85 0.913 - - - 0.913 - - - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
80. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.913 - - - 0.913 - - - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
81. NBR1 NBR1 752 0.912 - - - 0.912 - - - - -
82. arhgap25 ENSDARG00000061784 112 0.912 - - - 0.912 - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
83. C9H3orf70 C9H3orf70 225 0.911 - - - 0.911 - - - - -
84. fam203a fam203a 570 0.91 - - - 0.910 - - - - -
85. blvra ENSDARG00000059857 270 0.91 - - - 0.910 - - - - - biliverdin reductase A [Source:ZFIN;Acc:ZDB-GENE-060929-312]
86. CU928220.1 CU928220.1 146 0.909 - - - 0.909 - - - - -
87. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.909 - - - 0.909 - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
88. zgc:195282 ENSDARG00000079488 475 0.909 - - - 0.909 - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
89. rassf9 ENSDARG00000074721 448 0.903 - - - 0.903 - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
90. si:dkey-9i23.15 ENSDARG00000093997 544 0.902 - - - 0.902 - - - - - si:dkey-9i23.15 [Source:ZFIN;Acc:ZDB-GENE-090313-361]
91. rela ENSDARG00000098696 889 0.902 - - - 0.902 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
92. BAD BAD 1322 0.901 - - - 0.901 - - - - -
93. pou2f3 ENSDARG00000052387 103 0.899 - 0.899 - - - - - - - POU class 2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-060512-299]
94. C13H4orf32 C13H4orf32 174 0.899 - 0.899 - - - - - - -
95. lingo4b ENSDARG00000078527 235 0.898 - - - 0.898 - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
96. usp33 ENSDARG00000016163 651 0.897 - - - 0.897 - - - - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
97. stim1b ENSDARG00000061560 146 0.897 - - - 0.897 - - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
98. RAB11FIP5 RAB11FIP5 626 0.897 - - - 0.897 - - - - -
99. plag1 ENSDARG00000051926 275 0.897 - - - 0.897 - - - - - pleiomorphic adenoma gene 1 [Source:ZFIN;Acc:ZDB-GENE-060302-2]
100. gltpa ENSDARG00000061921 429 0.895 - - - 0.895 - - - - - glycolipid transfer protein a [Source:ZFIN;Acc:ZDB-GENE-060526-266]

There are 1226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA