Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppa1b

Gene Name Gene ID Reads Annotation
ppa1b ENSDARG00000030441 9027 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]










Genes with expression patterns similar to ppa1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppa1b ENSDARG00000030441 9027 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
2. maf1 ENSDARG00000013122 3365 2.489 - - - - 0.917 - - 0.705 0.867 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
3. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 2.468 - 0.835 - - 0.913 0.720 - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
4. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 2.435 - - 0.846 - 0.867 0.722 - - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
5. arpp19b ENSDARG00000039880 4823 2.396 - 0.720 0.916 - - 0.760 - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
6. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 2.204 0.758 0.726 - - - - - - 0.720 proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
7. zbtb18 ENSDARG00000028228 3653 1.922 - - 0.926 - - - 0.996 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
8. AP2A1 ENSDARG00000054320 5591 1.915 - - - - 0.918 - 0.997 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
9. ctdsp1 ENSDARG00000040674 2828 1.914 - - 0.917 - - - 0.997 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
10. si:ch73-110p20.1 5932 1.896 - - - - - - 0.997 - 0.899 si:ch73-110p20.1
11. timm10 ENSDARG00000069116 4459 1.877 - - - - 0.937 - - - 0.940 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
12. elmo1 ENSDARG00000098753 6966 1.868 - - - - - - 0.998 - 0.870 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
13. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.859 - 0.862 - - - - 0.997 - -
14. MAF1 ENSDARG00000013122 6899 1.851 - - 0.925 - 0.926 - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
15. lsm4 ENSDARG00000023852 6083 1.842 - 0.946 - - 0.896 - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
16. cpsf3 ENSDARG00000027649 6897 1.841 - - - - 0.904 - - - 0.937 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
17. ARHGAP35 2409 1.834 - 0.838 - - - - 0.996 - - Rho GTPase activating protein 35b, transcript variant X2
18. arl14ep ENSDARG00000001210 3029 1.828 - - - - 0.910 - - - 0.918 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
19. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.828 - - - - - - 0.997 - 0.831 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
20. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.827 - - 0.922 - 0.905 - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
21. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.814 - - - - - - 0.994 - 0.820 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
22. nudt3a ENSDARG00000016256 2713 1.805 - - 0.903 - 0.902 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
23. eif3s6ip ENSDARG00000101082 18515 1.788 - - - 0.795 - - 0.993 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
24. col16a1 ENSDARG00000009194 5600 1.786 - - - - 0.907 - - - 0.879 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
25. Sep-02 Sep-02 10074 1.777 - 0.898 - - 0.879 - - - -
26. im:7136729 im:7136729 1625 1.776 - - 0.925 - - - - - 0.851
27. CCDC71 CCDC71 2442 1.772 - - - - 0.903 - - - 0.869
28. commd4 ENSDARG00000061946 3281 1.772 - - - - 0.912 - - - 0.860 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
29. vgll4b ENSDARG00000103730 5266 1.766 - 0.876 - - 0.890 - - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
30. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1.764 - - - - 0.900 - - - 0.864 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
31. bcl9 ENSDARG00000036687 1124 1.763 - - 0.901 - - - - - 0.862 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
32. srsf5b ENSDARG00000027734 6996 1.756 - - 0.910 - - - - - 0.846 serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
33. tm9sf4 ENSDARG00000002536 1684 1.756 - - 0.906 - 0.850 - - - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
34. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.755 - 0.837 0.918 - - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
35. snrpe ENSDARG00000033175 7462 1.743 - - - - 0.941 - - - 0.802 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
36. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.742 - - 0.885 - - 0.857 - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
37. ube2a ENSDARG00000098466 12765 1.738 - 0.926 0.812 - - - - - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
38. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 1.738 - - - - - 0.740 0.998 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
39. lsm12b ENSDARG00000109510 14459 1.731 - - - - - - 0.984 - 0.747 LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
40. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.728 - 0.907 - - - - - - 0.821 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
41. necap2 ENSDARG00000046002 4372 1.725 - - 0.894 - - - - - 0.831 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
42. flr ENSDARG00000038024 562 1.724 - 0.818 0.906 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
43. hn1l hn1l 8861 1.72 - 0.803 - - - - - - 0.917
44. dtnba ENSDARG00000077694 5483 1.715 0.727 - - - - - 0.988 - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
45. C3H16orf89 C3H16orf89 449 1.709 - 0.813 - - 0.896 - - - -
46. emd ENSDARG00000095774, ENSDARG00000114017 1640 1.706 - 0.829 - - 0.877 - - - - emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
47. mapk6 ENSDARG00000032103 6422 1.703 - - - - - 0.705 0.998 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
48. edf1 ENSDARG00000009950 10518 1.699 - - - - - 0.708 0.991 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
49. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.697 - - 0.786 - 0.911 - - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
50. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.696 - 0.817 - - 0.879 - - - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
51. magi1b ENSDARG00000003169 2056 1.694 - 0.835 - - - - - - 0.859 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
52. ube2h ENSDARG00000000019 9900 1.683 - - 0.838 - - - - - 0.845 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
53. celsr1a ENSDARG00000069185 1894 1.678 - 0.760 0.918 - - - - - - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
54. emc3 ENSDARG00000020607 3406 1.677 - - 0.937 - - - - 0.740 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
55. ube2v2 ENSDARG00000028198 23341 1.671 - 0.865 0.806 - - - - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
56. ensab ENSDARG00000061644 2436 1.662 - 0.824 - - - - - - 0.838 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
57. CDCA4 ENSDARG00000042319 7918 1.659 - 0.857 - - - - - 0.802 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
58. rbm4.3 ENSDARG00000022129 28571 1.659 - - - - - - 0.950 - 0.709 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
59. dsc2l ENSDARG00000039677 2747 1.657 - - 0.872 - - - - - 0.785 desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
60. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.654 - - 0.906 - - - - - 0.748 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
61. pik3cb ENSDARG00000075253 2075 1.652 - 0.870 - - - - - 0.782 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
62. ncalda ENSDARG00000070688 5069 1.65 - - 0.903 - - - - 0.747 - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
63. rnf183 ENSDARG00000068851 2427 1.648 - - 0.918 - - - - - 0.730 ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
64. cd248b ENSDARG00000077938 2561 1.646 - - - - 0.929 - - 0.717 - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
65. nme3 ENSDARG00000100990 3889 1.645 - - 0.914 - - - - 0.731 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
66. abi1a ENSDARG00000010155 5631 1.64 - 0.848 - - - - - - 0.792 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
67. C2H1orf123 C2H1orf123 2344 1.639 - 0.858 - - - 0.781 - - -
68. brd4 ENSDARG00000078904 5367 1.634 - - 0.894 - - - - - 0.740 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
69. sec61a1 ENSDARG00000021669 20408 1.628 - - 0.759 - 0.869 - - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
70. arhgdia ENSDARG00000043795 14642 1.626 - - 0.744 - 0.882 - - - - Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
71. fkbp3 ENSDARG00000098059 5428 1.626 - - 0.703 - 0.923 - - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
72. lman2 ENSDARG00000061854 6251 1.621 - - - - 0.766 - - - 0.855 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
73. ppifb ENSDARG00000052842 3533 1.613 - 0.762 0.851 - - - - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
74. tuba8l ENSDARG00000042708 48551 1.609 - - - 0.733 - - 0.876 - - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
75. nrp1a ENSDARG00000102153 4154 1.609 - 0.878 - - 0.731 - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
76. pak1ip1 ENSDARG00000044488 1995 1.607 - 0.853 - - - 0.754 - - - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
77. GATAD2B ENSDARG00000005834 3855 1.604 - - 0.860 - - - - 0.744 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
78. wu:fq41a10 wu:fq41a10 7009 1.593 - - 0.794 - - - - - 0.799
79. TNRC6A ENSDARG00000079688 14433 1.585 - 0.882 - - - 0.703 - - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
80. tarbp2 ENSDARG00000070471 1946 1.58 - 0.855 - - - 0.725 - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
81. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.577 - - - - 0.854 0.723 - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
82. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.572 - - - - - - - 0.707 0.865 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
83. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.566 - - - - - 0.702 - - 0.864 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
84. csnk1db ENSDARG00000006125 2581 1.566 - 0.853 - - - 0.713 - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
85. slc1a2b ENSDARG00000102453 3136 1.565 - - - - - - - 0.738 0.827 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
86. ptpn13 ENSDARG00000103699 2866 1.554 - - - - - - - 0.719 0.835 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
87. wwtr1 ENSDARG00000067719 3484 1.551 - - - - - - - 0.703 0.848 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
88. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.549 - - 0.787 - - - - - 0.762 ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
89. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 1.539 0.716 - - - 0.823 - - - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
90. atp6v1d ENSDARG00000011175 8331 1.49 - 0.769 - - - - - 0.721 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
91. atp1b3a ENSDARG00000015790 12310 1.48 - 0.714 0.766 - - - - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
92. ndufb11 ENSDARG00000043467 7495 1.469 - - 0.754 - - 0.715 - - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
93. ppm1g ENSDARG00000075559 6516 1.468 - - 0.748 - - - - 0.720 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
94. plecb ENSDARG00000021987 13621 1.453 0.707 - - - 0.746 - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
95. ipo7 ENSDARG00000035751 7095 1.453 - - - 0.713 0.740 - - - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
96. rbm8a ENSDARG00000016516 8789 1.438 - - - - - 0.701 - 0.737 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
97. rrm1 ENSDARG00000014017 7296 1.433 - - - 0.717 - - - 0.716 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
98. cnbpa ENSDARG00000045776 8648 1.427 0.719 - - - 0.708 - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
99. aldoaa ENSDARG00000011665 56184 1.418 0.711 - - - - - 0.707 - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
100. grpel2 ENSDARG00000069421 5673 0.999 - - - - - - 0.999 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA