Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pou4f3

Gene Name Gene ID Reads Annotation
pou4f3 ENSDARG00000006206 8 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]










Genes with expression patterns similar to pou4f3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pou4f3 ENSDARG00000006206 8 5 - - 1.000 1.000 1.000 - - 1.000 1.000 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
2. trh ENSDARG00000006868 31 2.559 - - 0.950 - 0.850 - - 0.759 - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
3. otomp ENSDARG00000040306 682 2.51 - - 0.728 - 0.919 - - - 0.863 otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
4. ENSDARG00000029117 ENSDARG00000029117 80 2.348 - - 0.711 - 0.825 - - - 0.812
5. STRC ENSDARG00000105391 10 1.92 - - 1.000 - - - - - 0.920 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
6. gata2b ENSDARG00000009094 16 1.874 - - 1.000 - 0.874 - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
7. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1.821 - - 1.000 - - - - - 0.821
8. fam19a1 7 1.821 - - - 1.000 - - - - 0.821 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
9. U4_1 U4_1 2 1.821 - - 1.000 - - - - - 0.821
10. sh2d4b sh2d4b 1 1.821 - - 1.000 - - - - - 0.821
11. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1.821 - - 1.000 - - - - - 0.821 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
12. CR352265.1 ENSDARG00000062758 39 1.819 - - 0.917 - - - - - 0.902
13. fgfbp2 fgfbp2 14 1.811 - - - - 0.963 - - - 0.848
14. FGFBP1 FGFBP1 7 1.751 - - 1.000 - 0.751 - - - -
15. ttc6 ENSDARG00000104125 7 1.743 - - 1.000 0.743 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
16. si:dkey-188i13.8 ENSDARG00000092725 1 1.743 - - 1.000 0.743 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
17. tusc3 ENSDARG00000078854 4 1.743 - - 1.000 0.743 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
18. SNORA65 SNORA65 1 1.74 - - 1.000 - - - - 0.740 -
19. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.71 - - 0.889 - - - - - 0.821 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
20. CR382327.1 ENSDARG00000088739 56 1.651 - - - - 0.853 - - - 0.798
21. agbl5 ENSDARG00000045900 2 1.629 - - - - 0.753 - - - 0.876 ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
22. espnla ENSDARG00000078211 8 1.609 - - 0.856 - 0.753 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
23. si:ch211-80h18.1 ENSDARG00000078522 1941 1.595 - - 0.738 - - - - - 0.857 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
24. COL9A1 COL9A1 264 1.589 - - - - 0.779 - - - 0.810
25. si:dkey-30c15.12 ENSDARG00000058546 12 1.572 - - 0.751 - - - - - 0.821 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
26. s100t ENSDARG00000055589 453 1.564 - - 0.702 - 0.862 - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
27. ppp4r1 ENSDARG00000101316 1 1.564 - - - 0.743 - - - - 0.821 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
28. si:dkey-9a20.8 si:dkey-9a20.8 8 1.564 - - - 0.743 - - - - 0.821
29. ydjc ENSDARG00000062655 5 1.549 - - - 0.743 - - - 0.806 - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
30. GRIK1 GRIK1 1 1.549 - - - 0.743 - - - 0.806 -
31. si:dkey-57b6.4 si:dkey-57b6.4 3 1.496 - - - 0.743 0.753 - - - -
32. calhm3 ENSDARG00000079602 4 1.496 - - - 0.743 0.753 - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
33. SLC22A23_2 SLC22A23_2 0 1.496 - - - 0.743 0.753 - - - -
34. si:dkey-22h13.2 ENSDARG00000112725 3 1.483 - - - 0.743 - - - 0.740 - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
35. SEMA4D ENSDARG00000067801 5 1.455 - - 0.702 - 0.753 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
36. ZNF337_11 ZNF337_11 11 1.445 - - 0.702 0.743 - - - - -
37. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
38. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
39. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
40. zgc:195170 ENSDARG00000076264 3 1 - - - - 1.000 - - - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
41. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
42. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
43. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
44. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
45. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
46. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
47. kcnq3 ENSDARG00000060085 0 1 - - 1.000 - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
48. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
49. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
50. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
51. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
52. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
53. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
54. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
55. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
56. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
57. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
58. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - 1.000 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
59. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
60. si:dkey-61f9.4 si:dkey-61f9.4 6 1 - - - 1.000 - - - - -
61. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
62. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
63. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - 1.000 - - - - - -
64. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
65. Mar-04 Mar-04 21 1 - - - - 1.000 - - - -
66. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
67. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
68. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
69. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
70. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
71. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
72. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
73. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
74. panx3 ENSDARG00000004627 7 1 - - 1.000 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
75. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
76. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
77. CABZ01088508.1 CABZ01088508.1 0 1 - - 1.000 - - - - - -
78. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
79. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
80. BX119910.3 BX119910.3 7 1 - - - - 1.000 - - - -
81. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
82. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
83. HTRA2_8 HTRA2_8 0 1 - - 1.000 - - - - - -
84. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
85. STOX2 STOX2 0 1 - - 1.000 - - - - - -
86. CU695076.1 CU695076.1 7 1 - - 1.000 - - - - - -
87. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
88. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
89. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
90. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
91. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
92. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
93. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
94. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
95. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
96. nup85 ENSDARG00000098679 2 1 - - 1.000 - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
97. WWC1 ENSDARG00000076041 26 1 - - - 1.000 - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
98. BX572103.3 BX572103.3 0 1 - - 1.000 - - - - - -
99. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - - 1.000 - - - - - -
100. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]

There are 536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA