Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pou3f3a

Gene Name Gene ID Reads Annotation
pou3f3a ENSDARG00000042032 2835 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]










Genes with expression patterns similar to pou3f3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pou3f3a ENSDARG00000042032 2835 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
2. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 4.12 0.737 - - - 0.727 0.865 0.934 - 0.857 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
3. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 4.045 0.845 - - 0.772 - 0.778 0.877 - 0.773 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
4. her2 ENSDARG00000038205 3219 4.042 0.749 - - 0.721 - 0.844 0.917 - 0.811 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
5. hnrnpub ENSDARG00000004735 16496 3.993 0.747 - - 0.822 - 0.746 0.866 - 0.812 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
6. C8H1orf106 C8H1orf106 2690 3.96 0.753 - - 0.704 - 0.881 0.846 - 0.776
7. tmpob ENSDARG00000022978 8121 3.818 0.767 - - 0.731 - 0.708 0.845 - 0.767 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
8. tmem35 ENSDARG00000052567 5685 3.432 - 0.861 - - - 0.921 0.919 - 0.731 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
9. clstn1 ENSDARG00000031720 5286 3.367 0.737 - 0.922 - - 0.826 0.882 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
10. nova2 ENSDARG00000017673 7685 3.361 0.707 - - 0.846 - 0.873 0.935 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
11. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.276 0.713 - 0.780 0.843 - - 0.940 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
12. ssbp4 ENSDARG00000056483 10196 3.265 0.805 - 0.907 - - 0.806 0.747 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
13. dbx2 2971 3.264 0.773 - - - 0.765 0.783 0.943 - - developing brain homeobox 2
14. hmgb3a ENSDARG00000056725 15668 3.241 0.760 - - - - 0.886 0.891 - 0.704 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
15. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.238 0.780 - - - - 0.821 0.914 - 0.723 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
16. CABZ01115322.1 CABZ01115322.1 1283 3.218 - 0.775 - - - 0.730 0.936 0.777 -
17. fzd3a ENSDARG00000021664 1958 3.177 0.803 - - 0.796 - - 0.850 - 0.728 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
18. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 3.169 - 0.788 0.952 0.724 - - - - 0.705 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
19. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 3.147 0.701 - 0.833 - - 0.778 0.835 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
20. tuba1c ENSDARG00000055216 8384 3.13 0.714 - - - - 0.774 0.941 - 0.701 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
21. hnrnpa3 ENSDARG00000059351 453 3.125 0.748 - - - - 0.820 0.744 0.813 - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
22. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 3.108 - - 0.878 0.756 - - 0.721 - 0.753 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
23. lppr3a lppr3a 1294 3.088 - - - 0.737 0.756 0.782 0.813 - -
24. marcksa ENSDARG00000004049 2518 3.059 - - - 0.736 - 0.711 0.848 - 0.764 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
25. wfikkn2a ENSDARG00000013460 859 2.958 - - - 0.738 - 0.707 0.792 0.721 - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
26. nes ENSDARG00000088805 2710 2.784 - - 0.972 - - 0.883 0.929 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
27. elavl3 ENSDARG00000014420 8644 2.775 - - - - 0.977 0.869 0.929 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
28. dnajc5aa ENSDARG00000042948 2885 2.678 - - 0.950 - - 0.805 0.923 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
29. TUSC3 ENSDARG00000078854 1021 2.666 - - 0.919 - - 0.809 0.938 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
30. neurog1 ENSDARG00000056130 3924 2.598 0.753 - - - - 0.908 0.937 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
31. TUBB8P7_1 TUBB8P7_1 2722 2.594 0.704 - 0.940 - - - 0.950 - -
32. nadl1.1 1200 2.591 0.786 - - - - 0.859 0.946 - - neural adhesion molecule L1.1, transcript variant X1
33. mycla ENSDARG00000006003 1866 2.588 - 0.812 - - - - 0.836 0.940 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
34. slc18a3a ENSDARG00000006356 1285 2.574 0.748 - - - - 0.881 0.945 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
35. lhx4 ENSDARG00000039458 328 2.574 - 0.823 - - - 0.823 0.928 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
36. epha4b ENSDARG00000011600 3110 2.573 0.799 - - - - 0.846 0.928 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
37. hmgb1b ENSDARG00000030479 10398 2.567 0.808 - - - - 0.814 0.945 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
38. plp1a ENSDARG00000103732 3544 2.561 - - - 0.863 0.757 - 0.941 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
39. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.555 - - - 0.892 - 0.884 - - 0.779 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
40. fmnl2b ENSDARG00000075041 1744 2.549 - - 0.952 - 0.769 0.828 - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
41. rheb ENSDARG00000090213 1432 2.54 0.836 - - - - 0.839 0.865 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
42. ek1 ENSDARG00000020080 742 2.534 - - 0.949 - - - 0.863 - 0.722 eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
43. sox19b ENSDARG00000040266 532 2.529 0.824 - - - - 0.821 0.884 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
44. CABZ01111990.1 CABZ01111990.1 4374 2.527 0.734 - - - - 0.849 0.944 - -
45. tmie ENSDARG00000069423 305 2.525 0.739 - - - - 0.886 0.900 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
46. EFCC1 ENSDARG00000077826 1359 2.523 0.756 - - - - 0.850 0.917 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
47. cspg5a ENSDARG00000069981 1699 2.522 - - - 0.847 - 0.722 0.953 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
48. notch3 ENSDARG00000052139 15033 2.518 - - - 0.830 0.850 0.838 - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
49. dla ENSDARG00000010791 9281 2.511 0.770 - - - - - 0.930 - 0.811 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
50. dbx1a ENSDARG00000086393 3161 2.51 - - - 0.810 - 0.844 0.856 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
51. rbm25 rbm25 3629 2.509 - - 0.938 - - 0.855 - - 0.716
52. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.506 - - 0.853 - - - 0.851 - 0.802 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
53. atp6v0cb ENSDARG00000036577 3472 2.504 0.723 - - - - 0.830 0.951 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
54. ZFHX3 ENSDARG00000103057 7759 2.502 - - - 0.782 - 0.818 0.902 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
55. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.502 0.700 - - - - 0.869 0.933 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
56. hoxa9b ENSDARG00000056819 3081 2.498 0.771 - - - - 0.802 0.925 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
57. nhlh2 ENSDARG00000025495 1860 2.498 - - - - - 0.825 0.941 - 0.732 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
58. chrna2b ENSDARG00000057025 217 2.497 - - - - - 0.749 0.869 0.879 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
59. mir10d-1 mir10d-1 860 2.494 0.793 - - - - 0.772 0.929 - -
60. TUBA1A ENSDARG00000001889 25294 2.493 - - - 0.726 - 0.818 0.949 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
61. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.492 - - - 0.757 - 0.850 0.885 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
62. arnt2 ENSDARG00000103697 5731 2.491 0.751 - - - - 0.897 0.843 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
63. pax6a ENSDARG00000103379 3061 2.488 0.774 - - - - 0.826 0.888 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
64. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.487 0.727 - - - - 0.830 0.930 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
65. her4.3 ENSDARG00000070770 613 2.484 - - - - - 0.845 0.920 - 0.719 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
66. SPOCK1 ENSDARG00000074644 794 2.484 0.762 - - - - 0.786 0.936 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
67. lfng ENSDARG00000037879 11783 2.481 0.765 - - 0.817 - 0.899 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
68. st8sia2 ENSDARG00000018788 2183 2.48 - - - 0.797 - 0.744 0.939 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
69. RSF1_2 RSF1_2 1343 2.476 - - 0.956 - - - 0.802 - 0.718
70. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.476 - - - 0.719 - 0.863 0.894 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
71. CT990561.1 ENSDARG00000058284 566 2.474 - - 0.924 0.767 - - - 0.783 - EPH receptor A5 [Source:NCBI gene;Acc:797595]
72. mdkb ENSDARG00000020708 5393 2.473 - 0.804 - 0.799 - - 0.870 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
73. pou3f2a ENSDARG00000070220 817 2.472 - - - - - 0.829 0.849 - 0.794 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
74. chd7 ENSDARG00000075211 12085 2.468 0.731 - - - - 0.814 0.923 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
75. csnk1e ENSDARG00000045150, ENSDARG00000112948 288 2.465 0.725 - - - - 0.781 0.959 - - casein kinase 1, epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-7873]
76. dync1i1 ENSDARG00000060948 554 2.465 - - - - - 0.855 0.909 - 0.701 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
77. si:dkey-169l5.3 si:dkey-169l5.3 239 2.464 0.770 - - - - 0.778 0.916 - -
78. fyna ENSDARG00000011370 1679 2.464 0.709 - - - - 0.895 0.860 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
79. gfap ENSDARG00000025301 5584 2.463 0.727 - - - - 0.794 0.942 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
80. sertad2a ENSDARG00000093412 503 2.46 - - - - - 0.824 0.727 0.909 - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
81. sipa1l2 ENSDARG00000061640 4545 2.459 - - 0.935 - 0.721 - - - 0.803 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
82. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.459 - - 0.948 - - 0.748 0.763 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
83. vim ENSDARG00000010008 3551 2.449 0.742 - - - - 0.879 0.828 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
84. slc8a2b ENSDARG00000100592 598 2.448 0.769 - - - - 0.747 0.932 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
85. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.445 0.710 - - - - 0.785 0.950 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
86. UBE2QL1 ENSDARG00000079276 3474 2.443 0.762 - - - - 0.786 0.895 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
87. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.439 0.790 - - - - 0.769 0.880 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
88. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.437 - - - - 0.749 0.827 0.861 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
89. si:ch73-21g5.7 ENSDARG00000093156 9412 2.436 0.763 - - 0.740 - - 0.933 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
90. gsx1 ENSDARG00000035735 1243 2.435 - - - - - 0.732 0.921 - 0.782 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
91. pcdh1gc5 ENSDARG00000104826 10052 2.435 0.746 - - - - 0.742 0.947 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
92. stx1b ENSDARG00000000503 2724 2.434 0.737 - - - - 0.764 0.933 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
93. ccdc85ca ENSDARG00000005232 3218 2.433 0.773 - 0.923 - - 0.737 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
94. hectd2 ENSDARG00000061194 559 2.433 0.705 - - - - 0.863 0.865 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
95. elavl4 ENSDARG00000045639 998 2.433 - - - - - 0.771 0.940 0.722 - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
96. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.433 - - - 0.830 - - 0.890 - 0.713 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
97. insm1b ENSDARG00000053301 2032 2.43 - - - 0.776 - 0.839 - - 0.815 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
98. FP016176.1 FP016176.1 7030 2.428 - 0.734 - - - 0.829 0.865 - -
99. gpm6bb ENSDARG00000001676 2005 2.427 - - 0.950 0.760 - - - - 0.717 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
100. myt1b ENSDARG00000102879 5411 2.424 0.729 - - - - 0.815 0.880 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]

There are 2621 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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