Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pou3f1

Gene Name Gene ID Reads Annotation
pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]










Genes with expression patterns similar to pou3f1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
2. si:ch73-21g5.7 ENSDARG00000093156 9412 4.799 0.792 0.749 0.845 0.870 - 0.752 - - 0.791 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
3. sox3 ENSDARG00000053569 12016 4.698 0.806 0.778 0.797 - 0.720 - - 0.849 0.748 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
4. nova2 ENSDARG00000017673 7685 4.276 0.866 0.747 - 0.815 - 0.979 - - 0.869 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
5. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 4.21 0.814 - - 0.735 - 0.863 - 0.926 0.872 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
6. plp1a ENSDARG00000103732 3544 4.15 0.878 - - 0.858 0.855 0.801 - - 0.758 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
7. C8H1orf106 C8H1orf106 2690 4.147 0.753 - 0.801 0.858 - 0.950 - - 0.785
8. myt1b ENSDARG00000102879 5411 4.121 0.759 0.752 - - - 0.929 - 0.828 0.853 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
9. aplp1 ENSDARG00000098368 2317 4.103 0.715 - - - - 0.808 0.999 0.771 0.810 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
10. mdkb ENSDARG00000020708 5393 3.783 0.711 - 0.778 0.863 - 0.702 - - 0.729 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
11. atp1a3a ENSDARG00000018259 5393 3.408 0.741 0.724 - - - 0.944 0.999 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
12. lfng ENSDARG00000037879 11783 3.394 0.777 - - 0.813 - 0.959 - - 0.845 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
13. nadl1.1 1200 3.388 0.802 0.903 - - - 0.935 - - 0.748 neural adhesion molecule L1.1, transcript variant X1
14. dlb ENSDARG00000004232 5120 3.381 - 0.770 - 0.754 - - 1.000 - 0.857 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
15. lppr3a lppr3a 1294 3.371 - - - 0.874 0.860 0.834 - - 0.803
16. fzd3a ENSDARG00000021664 1958 3.371 - - 0.844 0.863 - 0.809 - - 0.855 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
17. tmem35 ENSDARG00000052567 5685 3.364 0.780 - - - - 0.954 - 0.733 0.897 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
18. tox ENSDARG00000032317 9126 3.349 0.877 - - - - 0.835 - 0.722 0.915 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
19. dbx2 2971 3.315 0.821 0.754 - - 0.860 0.880 - - - developing brain homeobox 2
20. lhx1a ENSDARG00000014018 958 3.298 0.883 0.750 - - - 0.834 - - 0.831 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
21. nhlh2 ENSDARG00000025495 1860 3.296 0.823 - - - - 0.907 - 0.805 0.761 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
22. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.291 0.758 - - - 0.864 0.957 - - 0.712 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
23. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.29 0.834 0.727 - - - - - 0.780 0.949 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
24. cspg5a ENSDARG00000069981 1699 3.288 0.743 - - 0.893 - 0.862 - - 0.790 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
25. ENDOD1_5 ENDOD1_5 8723 3.286 0.733 - 0.785 0.902 - 0.866 - - -
26. TUBA1A ENSDARG00000001889 25294 3.284 0.732 - - 0.732 - 0.940 - 0.880 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
27. AGO1 ENSDARG00000092644 4521 3.269 0.756 - 0.822 - - 0.976 - - 0.715 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
28. dbx1a ENSDARG00000086393 3161 3.232 0.880 0.746 - 0.717 - 0.889 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
29. tmpob ENSDARG00000022978 8121 3.228 - - - 0.713 - 0.756 - 0.863 0.896 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
30. hmp19 2554 3.197 0.904 - 0.730 - - 0.824 - - 0.739 HMP19 protein
31. fmnl2b ENSDARG00000075041 1744 3.182 - - - 0.714 0.842 0.824 - - 0.802 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
32. msi1 ENSDARG00000010710 2634 3.164 - 0.706 0.750 - - 0.980 - - 0.728 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
33. ctnnd2b ENSDARG00000003779 964 3.158 0.801 0.762 - - - 0.875 - - 0.720 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
34. Sep-03 Sep-03 1124 3.156 0.770 - 0.716 - - 0.861 - - 0.809
35. dpysl5a ENSDARG00000011141 1827 3.116 0.731 - 0.720 - - 0.751 - - 0.914 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
36. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.099 0.769 - 0.708 - - 0.854 - - 0.768 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
37. fam60al 2846 3.08 0.704 - 0.783 - - 0.795 - - 0.798 family with sequence similarity 60, member A, like
38. mapk12b ENSDARG00000006409 2246 3.072 0.819 0.729 - 0.791 - 0.733 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
39. khsrp ENSDARG00000026489 15738 3.059 0.712 - - - - 0.768 - 0.739 0.840 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
40. slc17a6b ENSDARG00000041150 823 3.024 0.873 0.713 - - - 0.724 - - 0.714 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
41. neurod neurod 1189 3.022 - 0.797 - - - 0.720 - 0.776 0.729
42. atp1b2a ENSDARG00000099203 4010 2.992 0.720 0.784 - 0.732 - - - - 0.756 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
43. tuba1c ENSDARG00000055216 8384 2.749 0.883 - - - - 0.915 - - 0.951 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
44. insm1b ENSDARG00000053301 2032 2.655 - - - 0.827 - 0.938 - - 0.890 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
45. nes ENSDARG00000088805 2710 2.654 0.904 0.767 - - - 0.983 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
46. SYT2 ENSDARG00000014169 265 2.65 0.883 0.868 - - - 0.899 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
47. dpysl3 ENSDARG00000002587 4381 2.637 0.802 - - - - 0.940 - - 0.895 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
48. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.622 - - 0.840 0.871 - - - - 0.911 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
49. hnrpl 6412 2.611 - - - - 0.962 0.756 - - 0.893 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
50. nbeaa ENSDARG00000070080 862 2.609 0.911 - - - - 0.856 - - 0.842 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
51. syngr3a ENSDARG00000014871 405 2.605 0.864 0.861 - - - 0.880 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
52. nrarpb ENSDARG00000018958 6225 2.602 0.892 - - - - 0.915 - - 0.795 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
53. ACVR2B 6615 2.602 - - - - 0.869 0.734 0.999 - - activin A receptor, type IIB
54. hmgb3a ENSDARG00000056725 15668 2.596 0.796 - - - - 0.914 - - 0.886 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
55. CABZ01028287.1 CABZ01028287.1 626 2.591 0.893 - - - - 0.841 - - 0.857
56. sncb ENSDARG00000104945 8197 2.59 0.879 0.809 - - - 0.902 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
57. clstn1 ENSDARG00000031720 5286 2.57 0.730 - - - 0.923 0.917 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
58. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.564 0.797 - - - - 0.902 - - 0.865 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
59. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.563 0.922 - - 0.755 - - - - 0.886 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
60. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.559 - - - 0.750 - 0.918 - - 0.891 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
61. ndrg4 ENSDARG00000103937 1234 2.556 - - - 0.828 - 0.865 - - 0.863 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
62. pou3f3a ENSDARG00000042032 2835 2.555 - - - 0.892 - 0.884 - - 0.779 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
63. hnrnpub ENSDARG00000004735 16496 2.552 - - - 0.863 - 0.788 - - 0.901 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
64. scn8aa ENSDARG00000005775 792 2.551 0.729 0.905 - - - 0.917 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
65. neurog1 ENSDARG00000056130 3924 2.551 0.816 0.760 - - - 0.975 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
66. stx1b ENSDARG00000000503 2724 2.546 0.728 0.890 - - - 0.928 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
67. gpm6bb ENSDARG00000001676 2005 2.542 0.817 - - 0.858 - - - - 0.867 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
68. CHL1 CHL1 1553 2.537 0.702 0.890 - - - 0.945 - - -
69. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.536 0.781 0.785 - - - 0.970 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
70. ZFHX3 ENSDARG00000103057 7759 2.527 - - 0.783 0.823 - 0.921 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
71. zgc:100906 ENSDARG00000033599 344 2.526 0.843 0.825 - - - 0.858 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
72. mllt11 ENSDARG00000071026 2518 2.524 0.856 - - - - 0.873 - - 0.795 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
73. SPOCK1 ENSDARG00000074644 794 2.523 0.889 - - - - 0.924 - - 0.710 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
74. cadm3 ENSDARG00000057013 1545 2.523 - 0.832 - - - 0.893 - - 0.798 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
75. marcksa ENSDARG00000004049 2518 2.522 - - - 0.827 - 0.811 - - 0.884 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
76. bzw1a ENSDARG00000010481 28451 2.52 - - - - - - 0.986 0.712 0.822 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
77. st8sia2 ENSDARG00000018788 2183 2.518 0.787 - 0.901 - - 0.830 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
78. prtgb ENSDARG00000040442 12365 2.518 - - 0.749 - - 0.780 0.989 - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
79. gsx1 ENSDARG00000035735 1243 2.509 - - 0.809 - - 0.891 - - 0.809 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
80. negr1 ENSDARG00000021607 1051 2.508 0.861 - - - - 0.862 - - 0.785 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
81. stmn2b ENSDARG00000070537 1586 2.502 0.839 - - - - 0.890 - 0.773 - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
82. sox2 ENSDARG00000070913 2763 2.499 0.822 0.810 - - - - - 0.867 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
83. gap43 ENSDARG00000099744 4114 2.499 0.776 - - - - 0.882 - - 0.841 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
84. her4.1 ENSDARG00000056732 1264 2.497 0.856 - - - - 0.869 - - 0.772 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
85. SPTBN4_1 ENSDARG00000092624 473 2.497 - - - 0.744 - 0.911 - - 0.842 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
86. inab ENSDARG00000053248 3239 2.495 - - - 0.749 - 0.964 - - 0.782 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
87. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.493 0.884 - - 0.788 - 0.821 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
88. si:ch211-10a23.2 ENSDARG00000060656 471 2.492 - - - 0.806 - 0.825 - - 0.861 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
89. vamp2 ENSDARG00000056877 2158 2.49 0.795 - - - - 0.839 - - 0.856 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
90. syt11b ENSDARG00000056105 578 2.483 - 0.751 - - - 0.908 - - 0.824 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
91. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.483 - 0.723 - 0.792 - 0.968 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
92. CABZ01111990.1 CABZ01111990.1 4374 2.482 0.774 - - - - 0.923 - - 0.785
93. irx1b ENSDARG00000056594 2224 2.482 0.863 0.727 - - - 0.892 - - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
94. atp6v0cb ENSDARG00000036577 3472 2.48 0.830 - - - - 0.906 - - 0.744 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
95. FP016176.1 FP016176.1 7030 2.466 - - - - 0.772 0.912 - - 0.782
96. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.453 - - - 0.806 - 0.799 - - 0.848 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
97. syt11a ENSDARG00000057913 1145 2.45 0.816 0.839 - - - 0.795 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
98. hmgb1b ENSDARG00000030479 10398 2.446 0.746 - 0.782 - - 0.918 - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
99. scrt2 ENSDARG00000056175 4331 2.444 0.768 0.817 - - - 0.859 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
100. rbfox3 rbfox3 1443 2.437 0.773 0.772 - - - 0.892 - - -

There are 2333 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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