Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pop4

Gene Name Gene ID Reads Annotation
pop4 ENSDARG00000101472, ENSDARG00000112497 749 POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]










Genes with expression patterns similar to pop4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pop4 ENSDARG00000101472, ENSDARG00000112497 749 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]
2. gon4l ENSDARG00000005867 982 1.556 - 0.737 - - - - 0.819 - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
3. traip ENSDARG00000011262 410 1.529 - - - - - - 0.742 0.787 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
4. med4 ENSDARG00000041503 395 1.514 - - - - - 0.757 - 0.757 - mediator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-438]
5. dkk3b ENSDARG00000070683 209 1.504 - 0.724 - - - - - 0.780 - dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
6. SMIM13 ENSDARG00000089204, ENSDARG00000113880 457 1.495 0.764 - - - - 0.731 - - - small integral membrane protein 13 [Source:ZFIN;Acc:ZDB-GENE-141212-279]
7. mmp24 ENSDARG00000018896 178 1.493 0.769 0.724 - - - - - - - matrix metallopeptidase 24 [Source:ZFIN;Acc:ZDB-GENE-040724-262]
8. fem1b ENSDARG00000062636 474 1.488 - 0.741 - - - - 0.747 - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
9. snrnp25 ENSDARG00000020363 588 1.468 - - - - - - 0.768 0.700 - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
10. CR847496.2 ENSDARG00000116070 802 0.903 - 0.903 - - - - - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
11. TMEM208 ENSDARG00000068291 643 0.863 - - - - - - 0.863 - - transmembrane protein 208 [Source:HGNC Symbol;Acc:HGNC:25015]
12. slc25a32a ENSDARG00000089791 511 0.861 - 0.861 - - - - - - - solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
13. mier1b ENSDARG00000001447 1680 0.861 - 0.861 - - - - - - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
14. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 0.858 - - - - - - 0.858 - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
15. ercc5 ENSDARG00000023678 468 0.856 - 0.856 - - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
16. sod1 ENSDARG00000043848 1514 0.856 - - - - - - 0.856 - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
17. SIRT5 ENSDARG00000039684 1124 0.853 - 0.853 - - - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
18. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 0.853 - - - 0.853 - - - - - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
19. nudcd1 ENSDARG00000036158 608 0.851 - - - - - - 0.851 - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
20. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.849 0.849 - - - - - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
21. zgc:173617 zgc:173617 114 0.847 - 0.847 - - - - - - -
22. dlx6a ENSDARG00000042291 185 0.845 - - - - - - - 0.845 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
23. ntn2 ENSDARG00000076748 368 0.843 - - - - - 0.843 - - - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
24. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.841 - - - - - - - 0.841 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
25. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 0.839 - 0.839 - - - - - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
26. tpi1a ENSDARG00000025012 562 0.838 - - - - - - - 0.838 - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
27. camkmt ENSDARG00000095224 1204 0.837 - - - - - 0.837 - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
28. atp10d ENSDARG00000078887 259 0.835 - 0.835 - - - - - - - ATPase phospholipid transporting 10D [Source:ZFIN;Acc:ZDB-GENE-090313-231]
29. vps26bl ENSDARG00000055433 645 0.835 - - - - - - 0.835 - - vacuolar protein sorting 26 homolog B, like [Source:ZFIN;Acc:ZDB-GENE-040718-112]
30. atl2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1582 0.835 - 0.835 - - - - - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
31. cyp20a1 ENSDARG00000006040 2570 0.831 - - - - - - 0.831 - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
32. dhx9 ENSDARG00000079725 1241 0.83 - 0.830 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
33. CR759791.3 CR759791.3 134 0.83 - - - - - - - 0.830 -
34. tmem151b tmem151b 442 0.828 - - - - - 0.828 - - -
35. galnt6 ENSDARG00000014386 1126 0.828 - - - - - 0.828 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
36. slc25a14 ENSDARG00000026680, ENSDARG00000113197 2387 0.826 - - - - - - 0.826 - - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:ZFIN;Acc:ZDB-GENE-040426-749]
37. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.825 - - - - - - 0.825 - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
38. phactr4a ENSDARG00000015552 1315 0.825 - 0.825 - - - - - - - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
39. nkain4 ENSDARG00000062699 377 0.824 - 0.824 - - - - - - - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
40. alox5 alox5 406 0.824 - 0.824 - - - - - - -
41. rnf113a ENSDARG00000037930 849 0.824 - - - - - - - 0.824 - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
42. HECW1 HECW1 1531 0.824 - 0.824 - - - - - - -
43. acvrl1 ENSDARG00000018179 308 0.821 - - - - - - 0.821 - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
44. atp10a ENSDARG00000061039, ENSDARG00000110280 869 0.821 - 0.821 - - - - - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
45. hook1 ENSDARG00000042946 452 0.82 - 0.820 - - - - - - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
46. im:7136729 im:7136729 1625 0.82 - - - - - - 0.820 - -
47. CABZ01065679.1 ENSDARG00000098342 99 0.819 0.819 - - - - - - - -
48. E2F3 ENSDARG00000070463 799 0.819 - 0.819 - - - - - - - E2F transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-070112-882]
49. naf1 ENSDARG00000057929, ENSDARG00000110711 426 0.819 - 0.819 - - - - - - - nuclear assembly factor 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4546]
50. stat4 ENSDARG00000028731 146 0.819 - 0.819 - - - - - - - signal transducer and activator of transcription 4 [Source:ZFIN;Acc:ZDB-GENE-030616-264]
51. tamm41 ENSDARG00000100157 1116 0.818 0.818 - - - - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
52. si:dkey-183c16.7 si:dkey-183c16.7 217 0.818 - - - - - 0.818 - - -
53. mad1l1 ENSDARG00000033852 464 0.817 - - - - - 0.817 - - - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
54. cops2 ENSDARG00000004785 4911 0.816 - - - - - - 0.816 - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
55. scp2a ENSDARG00000012194 614 0.816 - 0.816 - - - - - - - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
56. si:ch211-152c2.3 ENSDARG00000045898 3448 0.815 0.815 - - - - - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
57. rnf168 ENSDARG00000112483 594 0.815 - 0.815 - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
58. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 0.815 - 0.815 - - - - - - - SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
59. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 0.814 - - - - - - - 0.814 - zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
60. polr2eb ENSDARG00000026183 2174 0.812 - - - - - - 0.812 - - polymerase (RNA) II (DNA directed) polypeptide E, b [Source:ZFIN;Acc:ZDB-GENE-040801-83]
61. socs5b ENSDARG00000062745, ENSDARG00000112945, ENSDARG00000115523 646 0.812 - - - - - - 0.812 - - suppressor of cytokine signaling 5b [Source:ZFIN;Acc:ZDB-GENE-080722-18]
62. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.812 - - - - - - - 0.812 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
63. PDE3B ENSDARG00000062190 372 0.811 - - - - - 0.811 - - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
64. POLRMT ENSDARG00000101220 215 0.81 - - - - - 0.810 - - - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
65. EIF1B ENSDARG00000029445 5034 0.81 - - - - - - 0.810 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
66. zgc:154006 ENSDARG00000061797 152 0.81 - 0.810 - - - - - - - zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
67. prmt6 ENSDARG00000069706 484 0.809 - - - - - - - 0.809 - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
68. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 0.808 - - - 0.808 - - - - - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
69. ppp2r5a ENSDARG00000027017 2397 0.806 - - - - - 0.806 - - - protein phosphatase 2, regulatory subunit B', alpha isoform [Source:ZFIN;Acc:ZDB-GENE-040724-174]
70. E2F6 E2F6 1271 0.806 - 0.806 - - - - - - -
71. kirrelb 383 0.805 - - - - - - 0.805 - - kin of IRRE like b, transcript variant X3
72. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.804 - 0.804 - - - - - - - peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
73. hoxd4a ENSDARG00000059276 1516 0.803 - - - - - - 0.803 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
74. TXNDC15 ENSDARG00000110357 492 0.803 - - - - - - 0.803 - - thioredoxin domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-070615-36]
75. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.803 - - - - - - 0.803 - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
76. kat6b ENSDARG00000055429 625 0.802 - 0.802 - - - - - - - K(lysine) acetyltransferase 6B [Source:ZFIN;Acc:ZDB-GENE-000607-52]
77. tpte ENSDARG00000056985 724 0.802 - 0.802 - - - - - - - transmembrane phosphatase with tensin homology [Source:ZFIN;Acc:ZDB-GENE-030131-5503]
78. dync1li1 ENSDARG00000098317 729 0.802 - - - - - - 0.802 - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
79. rbm17 ENSDARG00000031346 2079 0.802 - - - - - - 0.802 - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
80. nupl1 nupl1 1100 0.802 - - - - - - 0.802 - -
81. MIPEP ENSDARG00000055344 351 0.801 - - - - - - - 0.801 - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
82. aspg ENSDARG00000052942 1406 0.8 - 0.800 - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
83. plekhn1 ENSDARG00000087844 339 0.8 - - - - - - - 0.800 - pleckstrin homology domain containing, family N member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-357]
84. ccdc85ca ENSDARG00000005232 3218 0.8 - - - - - - 0.800 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
85. CABZ01061567.1 CABZ01061567.1 295 0.8 - - - - - - 0.800 - -
86. BX855614.1 ENSDARG00000094551 1294 0.8 - 0.800 - - - - - - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
87. STRN ENSDARG00000100011 308 0.8 - - - - - - - 0.800 - striatin, calmodulin binding protein [Source:ZFIN;Acc:ZDB-GENE-070112-1172]
88. f2rl1.2 ENSDARG00000077540 822 0.8 - - - - - - - 0.800 - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
89. tmco4 ENSDARG00000078924 330 0.799 - 0.799 - - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
90. unc45a ENSDARG00000103643 622 0.799 - - - 0.799 - - - - - unc-45 myosin chaperone A [Source:ZFIN;Acc:ZDB-GENE-050417-158]
91. polr2m ENSDARG00000074968, ENSDARG00000113507 352 0.799 - - - - - - - 0.799 - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
92. cdt1 ENSDARG00000051854 206 0.799 - - - - - - - 0.799 - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
93. rnf150a ENSDARG00000024827 1903 0.799 - - - - - - 0.799 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
94. il17rd ENSDARG00000098359 1153 0.798 - - - - - - - 0.798 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
95. CU856359.2 CU856359.2 182 0.798 - - - - - - - 0.798 -
96. nrg1 ENSDARG00000104314 1081 0.798 - - - - - - 0.798 - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
97. C9H3orf38 C9H3orf38 83 0.798 - - - - - - - 0.798 -
98. gnai2b ENSDARG00000017294 686 0.798 - - - - - - - 0.798 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
99. atg4c ENSDARG00000044373 979 0.796 - 0.796 - - - - - - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
100. PRKRIR PRKRIR 261 0.796 - 0.796 - - - - - - -

There are 594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA